FFCP PHASE1:Hg19::chr17:18907463..18907501,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:18907463..18907501,-
|short_description=p2@FAM83G
|description=CAGE_peak_2_at_FAM83G_5end
|association_with_transcript=-82bp_to_ENST00000388995_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=644815 | |EntrezGene=644815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32554 | |HGNC=32554 | ||
|TSSclassifier=strong | |||
|UniProt=A6ND36 | |UniProt=A6ND36 | ||
|association_with_transcript=-82bp_to_ENST00000388995_5end | |||
|cluster_id=chr17:18907463..18907501,- | |||
|description=CAGE_peak_2_at_FAM83G_5end | |||
|id=chr17:18907463..18907501,- | |||
|ontology_enrichment_celltype=CL:0002321!9.14e-19!248;CL:0000220!3.15e-18!246;CL:0000012!1.04e-16!682;CL:0000548!1.79e-16!679;CL:0000004!1.79e-16!679;CL:0000255!1.79e-16!679;CL:0000144!9.91e-16!625;CL:0002371!1.02e-12!591;CL:0000066!1.44e-12!254;CL:0000055!7.06e-09!180;CL:0000223!1.71e-08!59;CL:0000003!2.78e-08!722;CL:0002368!4.64e-08!13;CL:0000192!6.78e-08!42;CL:0000514!6.78e-08!42;CL:0000183!9.13e-08!59;CL:0002159!1.93e-07!13;CL:0000393!1.96e-07!60;CL:0000211!1.96e-07!60;CL:0000680!2.39e-07!57;CL:0000056!2.39e-07!57;CL:0000355!2.39e-07!57;CL:0002076!2.57e-07!43;CL:0000076!4.94e-07!62;CL:0000187!5.86e-07!54;CL:0000359!9.38e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.55e-12;33!CL:0002057;8.55e-12;33!CL:0002368;5.14e-09;13!CL:0002159;8.93e-08;14!CL:0002076;2.17e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.87e-19,250;CL:0000223,7.21e-11,58;CL:0000066,3.96e-10,253;CL:0002076,1.57e-09,42;CL:0002368,3.64e-09,13;CL:0002159,9.26e-08,14;CL:0000860,1.76e-07,42;CL:0002057,1.76e-07,42;CL:0000192,1.79e-07,43;CL:0000514,1.79e-07,43;CL:0000680,1.97e-07,58;CL:0000056,1.97e-07,58;CL:0000355,1.97e-07,58;CL:0000393,5.16e-07,61;CL:0000211,5.16e-07,61;CL:0000187,5.49e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.39e-11!659;UBERON:0003914!5.93e-09!118;UBERON:0000467!1.55e-08!625;UBERON:0000480!2.56e-08!626;UBERON:0003104!4.40e-08!238;UBERON:0009142!4.40e-08!238;UBERON:0000922!4.91e-08!612;UBERON:0004573!3.24e-07!33;UBERON:0004571!3.24e-07!33;UBERON:0002050!3.25e-07!605;UBERON:0005423!3.25e-07!605;UBERON:0000923!5.30e-07!604;UBERON:0005291!5.30e-07!604;UBERON:0006598!5.30e-07!604;UBERON:0002532!5.30e-07!604;UBERON:0000926!8.00e-07!448;UBERON:0004120!8.00e-07!448;UBERON:0006603!8.00e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.39e-07;33!UBERON:0004571;3.39e-07;33!UBERON:0010371;8.78e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.76e-10,592;UBERON:0005423,6.90e-10,581;UBERON:0004573,2.95e-08,33;UBERON:0004571,2.95e-08,33;UBERON:0002050,3.88e-08,564;UBERON:0003914,7.54e-08,117;UBERON:0000923,4.52e-07,560;UBERON:0010316,4.52e-07,560;UBERON:0005291,4.52e-07,560;UBERON:0006598,4.52e-07,560;UBERON:0010317,4.52e-07,560;UBERON:0002532,4.52e-07,560 | |||
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| ||
|short_description=p2@FAM83G | |||
}} | }} |
Latest revision as of 23:27, 18 September 2015
Short description: | p2@FAM83G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM83G_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000388995_5end |
EntrezGene: | FAM83G |
HGNC: | 32554 |
UniProt: | A6ND36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.87e-19 | 250 |
endodermal cell | 7.21e-11 | 58 |
epithelial cell | 3.96e-10 | 253 |
endo-epithelial cell | 1.57e-09 | 42 |
respiratory epithelial cell | 3.64e-09 | 13 |
general ecto-epithelial cell | 9.26e-08 | 14 |
classical monocyte | 1.76e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-07 | 42 |
smooth muscle cell | 1.79e-07 | 43 |
smooth muscle myoblast | 1.79e-07 | 43 |
muscle precursor cell | 1.97e-07 | 58 |
myoblast | 1.97e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.97e-07 | 58 |
electrically responsive cell | 5.16e-07 | 61 |
electrically active cell | 5.16e-07 | 61 |
muscle cell | 5.49e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
embryo | 3.76e-10 | 592 |
developing anatomical structure | 6.90e-10 | 581 |
systemic artery | 2.95e-08 | 33 |
systemic arterial system | 2.95e-08 | 33 |
embryonic structure | 3.88e-08 | 564 |
epithelial tube | 7.54e-08 | 117 |
germ layer | 4.52e-07 | 560 |
germ layer / neural crest | 4.52e-07 | 560 |
embryonic tissue | 4.52e-07 | 560 |
presumptive structure | 4.52e-07 | 560 |
germ layer / neural crest derived structure | 4.52e-07 | 560 |
epiblast (generic) | 4.52e-07 | 560 |