FFCP PHASE1:Hg19::chr17:29281302..29281321,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:29281302..29281321,+
|short_description=p6@ADAP2
|description=CAGE_peak_6_at_ADAP2_5end
|association_with_transcript=30bp_to_ENST00000470962_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55803 | |EntrezGene=55803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16487 | |HGNC=16487 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000470962_5end | |||
|cluster_id=chr17:29281302..29281321,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_6_at_ADAP2_5end | |||
|id=chr17:29281302..29281321,+ | |||
|ontology_enrichment_celltype=CL:0002194!6.42e-15!63;CL:0000576!6.42e-15!63;CL:0000040!6.42e-15!63;CL:0000559!6.42e-15!63;CL:0002009!2.84e-14!65;CL:0000839!7.97e-13!70;CL:0000557!1.47e-12!71;CL:0000766!2.41e-11!76;CL:0000235!1.63e-09!10;CL:0002619!3.09e-09!3;CL:0002057!7.05e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.07e-102;6!CL:0002619;1.66e-74;3!CL:0000473;2.09e-13;39!CL:0000234;2.09e-13;39!CL:0000766;1.57e-10;69!CL:0000763;1.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.07e-102,6;CL:0002619,1.66e-74,3;CL:0002194,2.45e-26,59;CL:0000576,2.45e-26,59;CL:0000040,2.45e-26,59;CL:0000559,2.45e-26,59;CL:0002009,1.71e-25,61;CL:0000839,1.33e-23,66;CL:0000557,2.94e-23,67;CL:0000766,1.13e-21,72;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0002087,1.16e-13,115;CL:0000473,3.93e-13,48;CL:0000234,3.93e-13,48;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000115,6.93e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000049;6.04e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.35e-47!115;UBERON:0001049!2.33e-17!57;UBERON:0005068!2.33e-17!57;UBERON:0006241!2.33e-17!57;UBERON:0007135!2.33e-17!57;UBERON:0003075!1.43e-16!86;UBERON:0007284!1.43e-16!86;UBERON:0002346!1.74e-15!90;UBERON:0003080!2.50e-15!42;UBERON:0002616!4.85e-15!59;UBERON:0005743!6.04e-15!86;UBERON:0001017!1.16e-14!82;UBERON:0002780!6.89e-14!41;UBERON:0001890!6.89e-14!41;UBERON:0006240!6.89e-14!41;UBERON:0001893!1.31e-13!34;UBERON:0000955!6.03e-13!69;UBERON:0006238!6.03e-13!69;UBERON:0000073!7.52e-13!94;UBERON:0001016!7.52e-13!94;UBERON:0001869!1.23e-12!32;UBERON:0002791!2.87e-12!33;UBERON:0002020!1.35e-11!34;UBERON:0003528!1.35e-11!34;UBERON:0003056!1.62e-11!61;UBERON:0000062!3.90e-11!511;UBERON:0002371!1.74e-10!80;UBERON:0002619!2.08e-10!22;UBERON:0002390!1.58e-09!102;UBERON:0003061!1.58e-09!102;UBERON:0001950!1.80e-09!20;UBERON:0001474!2.36e-09!86;UBERON:0002193!5.32e-09!112;UBERON:0000956!6.30e-09!25;UBERON:0000203!6.30e-09!25;UBERON:0000153!2.04e-08!129;UBERON:0007811!2.04e-08!129;UBERON:0000033!2.58e-08!123;UBERON:0004765!5.67e-08!101;UBERON:0001434!5.67e-08!101;UBERON:0002405!9.97e-08!115;UBERON:0000923!1.14e-07!604;UBERON:0005291!1.14e-07!604;UBERON:0006598!1.14e-07!604;UBERON:0002532!1.14e-07!604;UBERON:0002050!1.26e-07!605;UBERON:0005423!1.26e-07!605;UBERON:0000467!2.26e-07!625;UBERON:0000480!2.49e-07!626;UBERON:0000922!2.51e-07!612;UBERON:0000468!4.04e-07!659;UBERON:0004121!4.73e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-20,76;UBERON:0001474,4.48e-19,82;UBERON:0004765,2.09e-17,90;UBERON:0002405,7.48e-17,93;UBERON:0002390,5.28e-16,98;UBERON:0003061,5.28e-16,98;UBERON:0001434,1.09e-15,100;UBERON:0002193,1.54e-14,108;UBERON:0002204,2.03e-09,167;UBERON:0003081,9.83e-08,203 | |||
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| ||
|short_description=p6@ADAP2 | |||
}} | }} |
Latest revision as of 10:40, 19 September 2015
Short description: | p6@ADAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADAP2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 30bp_to_ENST00000470962_5end |
EntrezGene: | ADAP2 |
HGNC: | 16487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.07e-102 | 6 |
adult endothelial progenitor cell | 1.66e-74 | 3 |
monopoietic cell | 2.45e-26 | 59 |
monocyte | 2.45e-26 | 59 |
monoblast | 2.45e-26 | 59 |
promonocyte | 2.45e-26 | 59 |
macrophage dendritic cell progenitor | 1.71e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-23 | 66 |
granulocyte monocyte progenitor cell | 2.94e-23 | 67 |
myeloid leukocyte | 1.13e-21 | 72 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
nongranular leukocyte | 1.16e-13 | 115 |
defensive cell | 3.93e-13 | 48 |
phagocyte | 3.93e-13 | 48 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
leukocyte | 1.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
endothelial cell | 6.93e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-20 | 76 |
bone element | 4.48e-19 | 82 |
skeletal element | 2.09e-17 | 90 |
immune system | 7.48e-17 | 93 |
hematopoietic system | 5.28e-16 | 98 |
blood island | 5.28e-16 | 98 |
skeletal system | 1.09e-15 | 100 |
hemolymphoid system | 1.54e-14 | 108 |
musculoskeletal system | 2.03e-09 | 167 |
lateral plate mesoderm | 9.83e-08 | 203 |