FFCP PHASE1:Hg19::chr19:16830713..16830741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284434 | |EntrezGene=284434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27619 | |HGNC=27619 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2Y8,E5RJJ1,Q149M9 | |UniProt=C9J2Y8,E5RJJ1,Q149M9 | ||
|association_with_transcript=-45bp_to_ENST00000420818,ENST00000518676,NM_001007525,uc002net.3,uc002neu.3_5end | |association_with_transcript=-45bp_to_ENST00000420818,ENST00000518676,NM_001007525,uc002net.3,uc002neu.3_5end | ||
|cluster_id=chr19:16830713..16830741,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_4_at_NWD1_5end | |description=CAGE_peak_4_at_NWD1_5end | ||
|id=chr19:16830713..16830741,+ | |id=chr19:16830713..16830741,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-50!115;UBERON:0001049!1.44e-44!57;UBERON:0005068!1.44e-44!57;UBERON:0006241!1.44e-44!57;UBERON:0007135!1.44e-44!57;UBERON:0000955!1.03e-37!69;UBERON:0006238!1.03e-37!69;UBERON:0002616!1.05e-37!59;UBERON:0001017!9.54e-36!82;UBERON:0005743!1.48e-35!86;UBERON:0002780!5.12e-34!41;UBERON:0001890!5.12e-34!41;UBERON:0006240!5.12e-34!41;UBERON:0003080!5.18e-33!42;UBERON:0003075!1.23e-32!86;UBERON:0007284!1.23e-32!86;UBERON:0002346!2.57e-32!90;UBERON:0000073!5.53e-31!94;UBERON:0001016!5.53e-31!94;UBERON:0002020!3.26e-28!34;UBERON:0003528!3.26e-28!34;UBERON:0001893!3.58e-28!34;UBERON:0002791!1.19e-26!33;UBERON:0000153!1.34e-26!129;UBERON:0007811!1.34e-26!129;UBERON:0002619!3.89e-25!22;UBERON:0001869!4.10e-25!32;UBERON:0001950!1.44e-24!20;UBERON:0000033!2.04e-24!123;UBERON:0003056!1.04e-23!61;UBERON:0000956!1.30e-21!25;UBERON:0000203!1.30e-21!25;UBERON:0000924!5.83e-21!173;UBERON:0006601!5.83e-21!173;UBERON:0004121!9.36e-21!169;UBERON:0004111!7.28e-16!241;UBERON:0000025!3.59e-15!194;UBERON:0000477!1.66e-13!286;UBERON:0000483!3.36e-13!309;UBERON:0000119!6.59e-13!312;UBERON:0002298!2.04e-12!8;UBERON:0003076!2.30e-12!15;UBERON:0003057!2.30e-12!15;UBERON:0000475!3.76e-12!365;UBERON:0000200!4.70e-12!6;UBERON:0000062!7.38e-12!511;UBERON:0001872!1.98e-10!5;UBERON:0004733!3.44e-10!12;UBERON:0002028!3.44e-10!12;UBERON:0007277!3.44e-10!12;UBERON:0000922!1.91e-09!612;UBERON:0004732!2.80e-09!13;UBERON:0001871!3.07e-09!7;UBERON:0000481!9.57e-09!347;UBERON:0000923!1.24e-08!604;UBERON:0005291!1.24e-08!604;UBERON:0006598!1.24e-08!604;UBERON:0002532!1.24e-08!604;UBERON:0002050!1.40e-08!605;UBERON:0005423!1.40e-08!605;UBERON:0002420!4.29e-08!9;UBERON:0007245!4.29e-08!9;UBERON:0010009!4.29e-08!9;UBERON:0010011!4.29e-08!9;UBERON:0000454!4.29e-08!9;UBERON:0002308!5.14e-08!9;UBERON:0000125!5.14e-08!9;UBERON:0001896!6.24e-08!3;UBERON:0005290!6.24e-08!3;UBERON:0010096!6.24e-08!3;UBERON:0000064!9.35e-08!219;UBERON:0000468!1.17e-07!659;UBERON:0000349!1.19e-07!5;UBERON:0000467!1.28e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0005153!3.31e-07!37;UBERON:0001894!3.32e-07!7;UBERON:0006222!3.32e-07!7;UBERON:0005157!5.52e-07!51;UBERON:0000988!7.62e-07!3;UBERON:0006331!9.49e-07!3;UBERON:0002771!9.49e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.69e-50!115;UBERON:0001049!1.44e-44!57;UBERON:0005068!1.44e-44!57;UBERON:0006241!1.44e-44!57;UBERON:0007135!1.44e-44!57;UBERON:0000955!1.03e-37!69;UBERON:0006238!1.03e-37!69;UBERON:0002616!1.05e-37!59;UBERON:0001017!9.54e-36!82;UBERON:0005743!1.48e-35!86;UBERON:0002780!5.12e-34!41;UBERON:0001890!5.12e-34!41;UBERON:0006240!5.12e-34!41;UBERON:0003080!5.18e-33!42;UBERON:0003075!1.23e-32!86;UBERON:0007284!1.23e-32!86;UBERON:0002346!2.57e-32!90;UBERON:0000073!5.53e-31!94;UBERON:0001016!5.53e-31!94;UBERON:0002020!3.26e-28!34;UBERON:0003528!3.26e-28!34;UBERON:0001893!3.58e-28!34;UBERON:0002791!1.19e-26!33;UBERON:0000153!1.34e-26!129;UBERON:0007811!1.34e-26!129;UBERON:0002619!3.89e-25!22;UBERON:0001869!4.10e-25!32;UBERON:0001950!1.44e-24!20;UBERON:0000033!2.04e-24!123;UBERON:0003056!1.04e-23!61;UBERON:0000956!1.30e-21!25;UBERON:0000203!1.30e-21!25;UBERON:0000924!5.83e-21!173;UBERON:0006601!5.83e-21!173;UBERON:0004121!9.36e-21!169;UBERON:0004111!7.28e-16!241;UBERON:0000025!3.59e-15!194;UBERON:0000477!1.66e-13!286;UBERON:0000483!3.36e-13!309;UBERON:0000119!6.59e-13!312;UBERON:0002298!2.04e-12!8;UBERON:0003076!2.30e-12!15;UBERON:0003057!2.30e-12!15;UBERON:0000475!3.76e-12!365;UBERON:0000200!4.70e-12!6;UBERON:0000062!7.38e-12!511;UBERON:0001872!1.98e-10!5;UBERON:0004733!3.44e-10!12;UBERON:0002028!3.44e-10!12;UBERON:0007277!3.44e-10!12;UBERON:0000922!1.91e-09!612;UBERON:0004732!2.80e-09!13;UBERON:0001871!3.07e-09!7;UBERON:0000481!9.57e-09!347;UBERON:0000923!1.24e-08!604;UBERON:0005291!1.24e-08!604;UBERON:0006598!1.24e-08!604;UBERON:0002532!1.24e-08!604;UBERON:0002050!1.40e-08!605;UBERON:0005423!1.40e-08!605;UBERON:0002420!4.29e-08!9;UBERON:0007245!4.29e-08!9;UBERON:0010009!4.29e-08!9;UBERON:0010011!4.29e-08!9;UBERON:0000454!4.29e-08!9;UBERON:0002308!5.14e-08!9;UBERON:0000125!5.14e-08!9;UBERON:0001896!6.24e-08!3;UBERON:0005290!6.24e-08!3;UBERON:0010096!6.24e-08!3;UBERON:0000064!9.35e-08!219;UBERON:0000468!1.17e-07!659;UBERON:0000349!1.19e-07!5;UBERON:0000467!1.28e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0005153!3.31e-07!37;UBERON:0001894!3.32e-07!7;UBERON:0006222!3.32e-07!7;UBERON:0005157!5.52e-07!51;UBERON:0000988!7.62e-07!3;UBERON:0006331!9.49e-07!3;UBERON:0002771!9.49e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.10e-23;3!UBERON:0005290;8.10e-23;3!UBERON:0002298;1.04e-19;6!UBERON:0003127;1.50e-15;2!UBERON:0000073;2.65e-14;53!UBERON:0002616;2.65e-14;53!UBERON:0000349;1.14e-13;5!UBERON:0003528;1.01e-10;34!UBERON:0002020;1.01e-10;34!UBERON:0002780;1.57e-10;41!UBERON:0001890;1.57e-10;41!UBERON:0001893;4.24e-10;34!UBERON:0004733;6.10e-10;12!UBERON:0002028;6.10e-10;12!UBERON:0001871;9.83e-10;6!UBERON:0007023;2.49e-09;114!UBERON:0004732;3.48e-09;13!UBERON:0001017;4.69e-09;75!UBERON:0001301;6.74e-09;1!UBERON:0002336;8.45e-09;1!UBERON:0011215;8.45e-09;1!UBERON:0001018;8.45e-09;1!UBERON:0002473;8.45e-09;1!UBERON:0005340;8.45e-09;1!UBERON:0003544;8.45e-09;1!UBERON:0005970;8.45e-09;1!UBERON:0002316;8.45e-09;1!UBERON:0001020;8.45e-09;1!UBERON:0002437;8.45e-09;1!UBERON:0002791;1.73e-08;32!UBERON:0001869;1.73e-08;32!UBERON:0001882;2.29e-08;1!UBERON:0003112;2.29e-08;1!UBERON:0002171;2.29e-08;1!UBERON:0011158;2.29e-08;1!UBERON:0006518;2.29e-08;1!UBERON:0008949;2.29e-08;1!UBERON:0000101;2.29e-08;1!UBERON:0003128;2.29e-08;1!UBERON:0005403;2.29e-08;1!UBERON:0002167;2.29e-08;1!UBERON:0001703;2.29e-08;1!UBERON:0002241;2.29e-08;1!UBERON:0000369;5.82e-08;4!UBERON:0002435;5.82e-08;4!UBERON:0000204;5.82e-08;4!UBERON:0002420;1.13e-07;9!UBERON:0007245;1.13e-07;9!UBERON:0010009;1.13e-07;9!UBERON:0010011;1.13e-07;9!UBERON:0000454;1.13e-07;9!UBERON:0002619;1.26e-07;22!UBERON:0000125;1.42e-07;9!UBERON:0002308;1.42e-07;9 | |||
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|short_description=p4@NWD1 | |short_description=p4@NWD1 | ||
}} | }} |
Latest revision as of 10:35, 16 September 2015
Short description: | p4@NWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NWD1_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -45bp_to_ENST00000420818, ENST00000518676, NM_001007525, uc002net.3, uc002neu.3_5end |
EntrezGene: | NWD1 |
HGNC: | 27619 |
UniProt: | C9J2Y8E5RJJ1Q149M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data