FFCP PHASE1:Hg19::chr17:36065029..36065045,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:36065029..36065045,-
|short_description=p@chr17:36065029..36065045,-
|description=CAGE_peak_at_chr17:36065029..36065045,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:36065029..36065045,- | |||
|coexpression_cluster_id=C2401 | |||
|description=CAGE_peak_at_chr17:36065029..36065045,- | |||
|id=chr17:36065029..36065045,- | |||
|ontology_enrichment_celltype=CL:1000497!8.05e-24!18;CL:0002518!8.05e-24!18;CL:1000449!4.27e-19!16;CL:1000507!1.29e-17!12;CL:1000494!1.29e-17!12;CL:0000066!6.91e-15!254;CL:0002681!1.90e-12!13;CL:0002584!1.90e-12!13;CL:0000223!4.41e-09!59;CL:0002231!9.27e-08!3;CL:0002076!7.39e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.10e-45;17!CL:0002518;1.10e-45;17!CL:1000507;1.83e-38;10!CL:1000494;1.83e-38;10!CL:1000449;5.18e-33;15!CL:0002681;2.07e-16;12!CL:0002584;2.07e-16;12!CL:0000313;9.04e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.50e-46,17;CL:0002518,8.50e-46,17;CL:1000507,1.69e-38,10;CL:1000494,1.69e-38,10;CL:1000449,4.12e-33,15;CL:0002681,2.15e-16,12;CL:0002584,2.15e-16,12;CL:0000313,9.44e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.25e-09;1!UBERON:0003918;5.26e-08;10!UBERON:0007687;5.26e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.35e-14!106;DOID:299!9.62e-13!25;DOID:0050687!1.05e-09!143;DOID:4468!8.07e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.99e-17;2!DOID:299;4.09e-11;25!DOID:2152;9.04e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.12e-17,2;DOID:299,4.33e-11,25;DOID:2152,9.44e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;1.00e-38;24!UBERON:0011143;1.00e-38;24!UBERON:0004211;1.83e-38;10!UBERON:0009773;1.83e-38;10!UBERON:0001231;1.83e-38;10!UBERON:0004810;1.83e-38;10!UBERON:0006555;5.18e-33;15!UBERON:0004819;5.18e-33;15!UBERON:0001285;5.18e-33;15!UBERON:0007684;5.18e-33;15!UBERON:0000489;9.56e-32;29!UBERON:0006554;1.25e-30;30!UBERON:0001008;1.25e-30;30!UBERON:0001225;2.07e-16;12!UBERON:0008987;2.07e-16;12!UBERON:0005172;1.63e-14;52!UBERON:0005173;1.63e-14;52!UBERON:0001851;4.18e-13;15!UBERON:0000353;4.18e-13;15!UBERON:0002417;1.36e-10;58!UBERON:0000916;1.36e-10;58!UBERON:0004911;9.04e-10;1!UBERON:0003103;2.01e-07;61!UBERON:0005177;4.11e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.69e-38,10;UBERON:0002113,1.10e-35,26;UBERON:0003918,1.10e-35,26;UBERON:0011143,1.10e-35,26;UBERON:0005095,1.10e-35,26;UBERON:0007687,1.10e-35,26;UBERON:0004211,4.12e-33,15;UBERON:0009773,4.12e-33,15;UBERON:0001231,4.12e-33,15;UBERON:0001285,4.12e-33,15;UBERON:0007684,4.12e-33,15;UBERON:0004208,4.12e-33,15;UBERON:0006555,5.53e-31,16;UBERON:0004819,5.53e-31,16;UBERON:0000489,1.21e-29,31;UBERON:0005172,2.29e-19,54;UBERON:0005173,2.29e-19,54;UBERON:0006554,6.14e-19,47;UBERON:0001008,1.66e-18,48;UBERON:0002417,3.18e-17,60;UBERON:0000916,3.18e-17,60;UBERON:0001225,2.15e-16,12;UBERON:0008987,2.15e-16,12;UBERON:0001851,4.29e-13,15;UBERON:0000353,4.29e-13,15;UBERON:0003103,1.60e-12,68;UBERON:0005177,4.14e-11,101;UBERON:0004911,9.44e-10,1;UBERON:0009569,2.89e-08,112 | |||
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| ||
|short_description=p@chr17:36065029..36065045,- | |||
}} | }} |
Latest revision as of 15:52, 25 July 2015
Short description: | p@chr17:36065029..36065045, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:36065029..36065045, - |
Coexpression cluster: | C2401_serous_Renal_renal_signet_mesothelioma_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.50e-46 | 17 |
kidney epithelial cell | 8.50e-46 | 17 |
kidney tubule cell | 1.69e-38 | 10 |
nephron tubule epithelial cell | 1.69e-38 | 10 |
epithelial cell of nephron | 4.12e-33 | 15 |
kidney cortical cell | 2.15e-16 | 12 |
renal cortical epithelial cell | 2.15e-16 | 12 |
serous secreting cell | 9.44e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.69e-38 | 10 |
kidney | 1.10e-35 | 26 |
kidney mesenchyme | 1.10e-35 | 26 |
upper urinary tract | 1.10e-35 | 26 |
kidney rudiment | 1.10e-35 | 26 |
kidney field | 1.10e-35 | 26 |
nephron epithelium | 4.12e-33 | 15 |
renal tubule | 4.12e-33 | 15 |
nephron tubule | 4.12e-33 | 15 |
nephron | 4.12e-33 | 15 |
uriniferous tubule | 4.12e-33 | 15 |
nephrogenic mesenchyme | 4.12e-33 | 15 |
excretory tube | 5.53e-31 | 16 |
kidney epithelium | 5.53e-31 | 16 |
cavitated compound organ | 1.21e-29 | 31 |
abdomen element | 2.29e-19 | 54 |
abdominal segment element | 2.29e-19 | 54 |
urinary system structure | 6.14e-19 | 47 |
renal system | 1.66e-18 | 48 |
abdominal segment of trunk | 3.18e-17 | 60 |
abdomen | 3.18e-17 | 60 |
cortex of kidney | 2.15e-16 | 12 |
renal parenchyma | 2.15e-16 | 12 |
cortex | 4.29e-13 | 15 |
parenchyma | 4.29e-13 | 15 |
compound organ | 1.60e-12 | 68 |
trunk region element | 4.14e-11 | 101 |
epithelium of female gonad | 9.44e-10 | 1 |
subdivision of trunk | 2.89e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.12e-17 | 2 |
adenocarcinoma | 4.33e-11 | 25 |
ovary epithelial cancer | 9.44e-10 | 1 |