FFCP PHASE1:Hg19::chr17:36609912..36609923,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:36609912..36609923,+
|short_description=p@chr17:36609912..36609923,+
|description=CAGE_peak_at_chr17:36609912..36609923,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:36609912..36609923,+ | |||
|coexpression_cluster_id=C3626 | |||
|description=CAGE_peak_at_chr17:36609912..36609923,+ | |||
|id=chr17:36609912..36609923,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.32e-20!119;CL:0000220!5.25e-19!246;CL:0002321!8.46e-19!248;CL:0000066!5.90e-18!254;CL:0000055!3.44e-17!180;CL:0000213!2.30e-13!57;CL:0000215!2.30e-13!57;CL:0000076!1.39e-11!62;CL:0000548!1.60e-10!679;CL:0000004!1.60e-10!679;CL:0000255!1.60e-10!679;CL:0002078!2.10e-10!44;CL:0000057!3.19e-10!75;CL:0000012!6.97e-10!682;CL:0000183!7.02e-10!59;CL:0000115!7.76e-09!35;CL:0000187!1.16e-07!54;CL:1000449!1.24e-07!16;CL:0000680!2.44e-07!57;CL:0000056!2.44e-07!57;CL:0000355!2.44e-07!57;CL:0002139!3.81e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.35e-09;15!CL:0002681;7.08e-09;12!CL:0002584;7.08e-09;12!CL:0000115;7.59e-09;36!CL:0000213;3.16e-08;58!CL:0000215;3.16e-08;58!CL:0002078;8.69e-08;45!CL:1000497;1.22e-07;17!CL:0002518;1.22e-07;17!CL:0002139;1.94e-07;24!CL:0000071;3.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.25e-19,121;CL:0000213,2.98e-15,58;CL:0000215,2.98e-15,58;CL:0000066,1.72e-14,253;CL:0002321,1.74e-13,250;CL:0002078,9.12e-13,45;CL:0000076,4.55e-12,63;CL:0000115,4.51e-11,36;CL:1000449,1.99e-09,15;CL:0002681,6.59e-09,12;CL:0002584,6.59e-09,12;CL:0000057,1.61e-08,76;CL:1000497,1.05e-07,17;CL:0002518,1.05e-07,17;CL:0002139,1.41e-07,24;CL:0000071,2.27e-07,18;CL:0002546,2.27e-07,18;CL:1000746,8.95e-07,7;CL:1000612,8.95e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;3.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.94e-13!143;UBERON:0003914!3.02e-13!118;UBERON:0003104!4.93e-13!238;UBERON:0009142!4.93e-13!238;UBERON:0000119!6.05e-13!312;UBERON:0000481!7.22e-13!347;UBERON:0002049!3.06e-12!79;UBERON:0007798!3.06e-12!79;UBERON:0000483!3.98e-12!309;UBERON:0002100!5.64e-12!216;UBERON:0000490!5.28e-11!138;UBERON:0000475!6.47e-11!365;UBERON:0004872!1.18e-10!84;UBERON:0000486!3.60e-10!82;UBERON:0000477!5.39e-10!286;UBERON:0000468!2.85e-09!659;UBERON:0000055!3.17e-09!69;UBERON:0000467!1.66e-08!625;UBERON:0000914!1.78e-08!83;UBERON:0002329!1.78e-08!83;UBERON:0003077!1.78e-08!83;UBERON:0003059!1.78e-08!83;UBERON:0007282!1.78e-08!83;UBERON:0009618!1.78e-08!83;UBERON:0007285!1.78e-08!83;UBERON:0000480!2.55e-08!626;UBERON:0004535!3.08e-08!110;UBERON:0001009!3.65e-08!113;UBERON:0001981!4.60e-08!60;UBERON:0007500!4.60e-08!60;UBERON:0004537!4.60e-08!60;UBERON:0006965!4.60e-08!60;UBERON:0004290!5.16e-08!70;UBERON:0004211!1.24e-07!16;UBERON:0001285!1.24e-07!16;UBERON:0007684!1.24e-07!16;UBERON:0003220!1.24e-07!16;UBERON:0004208!1.24e-07!16;UBERON:0000353!1.89e-07!17;UBERON:0000064!2.62e-07!219;UBERON:0006555!3.14e-07!17;UBERON:0005103!3.14e-07!17;UBERON:0000083!3.14e-07!17;UBERON:0009201!3.14e-07!17;UBERON:0004819!3.14e-07!17;UBERON:0006553!3.14e-07!17;UBERON:0003074!3.14e-07!17;UBERON:0003060!3.14e-07!17;UBERON:0001048!5.04e-07!168;UBERON:0003064!6.86e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.35e-09;15!UBERON:0004819;2.35e-09;15!UBERON:0001285;2.35e-09;15!UBERON:0007684;2.35e-09;15!UBERON:0000353;5.48e-09;15!UBERON:0001225;7.08e-09;12!UBERON:0008987;7.08e-09;12!UBERON:0001851;2.16e-08;15!UBERON:0004638;3.39e-07;18!UBERON:0001986;3.39e-07;18!UBERON:0004852;3.39e-07;18!UBERON:0000490;8.49e-07;33 | |||
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| ||
|short_description=p@chr17:36609912..36609923,+ | |||
}} | }} |
Latest revision as of 15:55, 25 July 2015
Short description: | p@chr17:36609912..36609923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:36609912..36609923, + |
Coexpression cluster: | C3626_Pericytes_oral_Hair_Hepatic_Endothelial_Mesothelial_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.25e-19 | 121 |
lining cell | 2.98e-15 | 58 |
barrier cell | 2.98e-15 | 58 |
epithelial cell | 1.72e-14 | 253 |
embryonic cell | 1.74e-13 | 250 |
meso-epithelial cell | 9.12e-13 | 45 |
squamous epithelial cell | 4.55e-12 | 63 |
endothelial cell | 4.51e-11 | 36 |
epithelial cell of nephron | 1.99e-09 | 15 |
kidney cortical cell | 6.59e-09 | 12 |
renal cortical epithelial cell | 6.59e-09 | 12 |
fibroblast | 1.61e-08 | 76 |
kidney cell | 1.05e-07 | 17 |
kidney epithelial cell | 1.05e-07 | 17 |
endothelial cell of vascular tree | 1.41e-07 | 24 |
blood vessel endothelial cell | 2.27e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-07 | 18 |
glomerular cell | 8.95e-07 | 7 |
kidney corpuscule cell | 8.95e-07 | 7 |