FFCP PHASE1:Hg19::chr17:38613300..38613311,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:38613300..38613311,-
|short_description=p@chr17:38613300..38613311,-
|description=CAGE_peak_at_chr17:38613300..38613311,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38613300..38613311,- | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613300..38613311,- | |||
|id=chr17:38613300..38613311,- | |||
|ontology_enrichment_celltype=CL:0000055!2.72e-12!180;CL:0000057!4.00e-12!75;CL:0000135!1.16e-07!3;CL:0000386!1.16e-07!3;CL:0000388!1.16e-07!3;CL:0002371!1.61e-07!591;CL:0002615!8.50e-07!3;CL:0000188!8.96e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.59e-28;3!CL:0000388;2.59e-28;3!CL:0000214;1.41e-13;3!CL:0002615;3.91e-13;3!CL:0000499;1.43e-11;28!CL:0000136;1.73e-11;13!CL:0002616;8.94e-11;1!CL:0002581;2.62e-10;1!CL:0000153;5.24e-10;9!CL:0000447;5.24e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.06e-28,3;CL:0000388,2.06e-28,3;CL:0000214,1.33e-13,3;CL:0002615,4.29e-13,3;CL:0000499,1.37e-11,28;CL:0002616,8.95e-11,1;CL:0002581,2.50e-10,1;CL:0000153,5.24e-10,9;CL:0000447,5.24e-10,9;CL:0000136,6.13e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.62e-10;1!UBERON:0003852;2.62e-10;1 | |||
|ontology_enrichment_disease=DOID:0060084!1.87e-07!3;DOID:127!1.87e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.55e-13;3!DOID:127;6.55e-13;3!DOID:0060072;6.53e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.57e-13,3;DOID:127,3.57e-13,3;DOID:0060072,4.15e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0000043!1.16e-07!3;UBERON:0004905!1.64e-07!5;UBERON:0000982!1.64e-07!5;UBERON:0004770!1.64e-07!5;UBERON:0000914!5.90e-07!83;UBERON:0002329!5.90e-07!83;UBERON:0003077!5.90e-07!83;UBERON:0003059!5.90e-07!83;UBERON:0007282!5.90e-07!83;UBERON:0009618!5.90e-07!83;UBERON:0007285!5.90e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.59e-28;3!UBERON:0000043;2.59e-28;3!UBERON:0007845;2.59e-28;3!UBERON:0005406;2.48e-19;2!UBERON:0004905;8.64e-19;8!UBERON:0000982;8.64e-19;8!UBERON:0004770;8.64e-19;8!UBERON:0004457;9.90e-17;9!UBERON:0000042;9.90e-17;9!UBERON:0006915;1.41e-13;3!UBERON:0007616;1.41e-13;3!UBERON:0002217;1.41e-13;3!UBERON:0002018;1.41e-13;3!UBERON:0005705;2.62e-10;1!UBERON:0008193;2.62e-10;1!UBERON:0010912;2.62e-10;1!UBERON:0002514;2.62e-10;1!UBERON:0003457;2.62e-10;1!UBERON:0008907;2.62e-10;1!UBERON:0008001;2.62e-10;1!UBERON:0007213;2.62e-10;1!UBERON:0009891;2.62e-10;1!UBERON:0007914;2.62e-10;1!UBERON:0007375;2.62e-10;1!UBERON:0003323;2.62e-10;1!UBERON:0010258;2.62e-10;1!UBERON:0005253;2.62e-10;1!UBERON:0007842;2.62e-10;1!UBERON:0002397;2.62e-10;1!UBERON:0003113;2.62e-10;1!UBERON:0003277;2.62e-10;1!UBERON:0001709;2.62e-10;1!UBERON:0002244;2.62e-10;1!UBERON:0005620;2.62e-10;1!UBERON:0010364;2.62e-10;1!UBERON:0004288;2.62e-10;1!UBERON:0000075;2.95e-09;16!UBERON:0001434;1.41e-08;36!UBERON:0002204;1.58e-08;70!UBERON:0011135;3.10e-08;5!UBERON:0002216;3.10e-08;5!UBERON:0011134;3.10e-08;5!UBERON:0002209;3.10e-08;5!UBERON:0002213;3.10e-08;5!UBERON:0007844;3.10e-08;5!UBERON:0011138;3.10e-08;5!UBERON:0001130;3.10e-08;5!UBERON:0001066;3.10e-08;5!UBERON:0001468;3.10e-08;5!UBERON:0003688;5.33e-07;6!UBERON:0002358;5.33e-07;6!UBERON:0003684;5.33e-07;6!UBERON:0001178;5.33e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.06e-28,3;UBERON:0000043,2.06e-28,3;UBERON:0007845,2.06e-28,3;UBERON:0005406,2.38e-19,2;UBERON:0004905,8.86e-19,8;UBERON:0000982,8.86e-19,8;UBERON:0004770,8.86e-19,8;UBERON:0006915,1.33e-13,3;UBERON:0007616,1.33e-13,3;UBERON:0002217,1.33e-13,3;UBERON:0002018,1.33e-13,3;UBERON:0004457,1.35e-12,12;UBERON:0000042,1.35e-12,12;UBERON:0005705,4.33e-10,1;UBERON:0008193,4.33e-10,1;UBERON:0010912,4.33e-10,1;UBERON:0002514,4.33e-10,1;UBERON:0003457,4.33e-10,1;UBERON:0008907,4.33e-10,1;UBERON:0008001,4.33e-10,1;UBERON:0007213,4.33e-10,1;UBERON:0009891,4.33e-10,1;UBERON:0007914,4.33e-10,1;UBERON:0009292,4.33e-10,1;UBERON:0003099,4.33e-10,1;UBERON:0007375,4.33e-10,1;UBERON:0003323,4.33e-10,1;UBERON:0010258,4.33e-10,1;UBERON:0007842,4.33e-10,1;UBERON:0009494,4.33e-10,1;UBERON:0010042,4.33e-10,1;UBERON:0010045,4.33e-10,1;UBERON:0010259,4.33e-10,1;UBERON:0010359,4.33e-10,1;UBERON:0009526,4.33e-10,1;UBERON:0002397,4.33e-10,1;UBERON:0003113,4.33e-10,1;UBERON:0003277,4.33e-10,1;UBERON:0001709,4.33e-10,1;UBERON:0004066,4.33e-10,1;UBERON:0002244,4.33e-10,1;UBERON:0005620,4.33e-10,1;UBERON:0004362,4.33e-10,1;UBERON:0010364,4.33e-10,1;UBERON:0010046,4.33e-10,1;UBERON:0005868,4.33e-10,1;UBERON:0007238,4.33e-10,1;UBERON:0004288,4.33e-10,1;UBERON:0004068,4.33e-10,1;UBERON:0010334,4.33e-10,1;UBERON:0003852,4.33e-10,1;UBERON:0010253,4.33e-10,1;UBERON:0000075,3.25e-09,16;UBERON:0011135,3.27e-08,5;UBERON:0002216,3.27e-08,5;UBERON:0011134,3.27e-08,5;UBERON:0002209,3.27e-08,5;UBERON:0002213,3.27e-08,5;UBERON:0005856,3.27e-08,5;UBERON:0005866,3.27e-08,5;UBERON:0005863,3.27e-08,5;UBERON:0007844,3.27e-08,5;UBERON:0011138,3.27e-08,5;UBERON:0001130,3.27e-08,5;UBERON:0001066,3.27e-08,5;UBERON:0001468,3.27e-08,5;UBERON:0003688,5.58e-07,6;UBERON:0002358,5.58e-07,6;UBERON:0003684,5.58e-07,6;UBERON:0001178,5.58e-07,6 | |||
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| ||
|short_description=p@chr17:38613300..38613311,- | |||
}} | }} |
Latest revision as of 16:28, 25 July 2015
Short description: | p@chr17:38613300..38613311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613300..38613311, - |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.06e-28 | 3 |
tendon cell | 2.06e-28 | 3 |
synovial cell | 1.33e-13 | 3 |
adipocyte of omentum tissue | 4.29e-13 | 3 |
stromal cell | 1.37e-11 | 28 |
perirenal adipocyte cell | 8.95e-11 | 1 |
perirenal preadipocyte | 2.50e-10 | 1 |
GAG secreting cell | 5.24e-10 | 9 |
carbohydrate secreting cell | 5.24e-10 | 9 |
fat cell | 6.13e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.57e-13 | 3 |
leiomyoma | 3.57e-13 | 3 |
benign neoplasm | 4.15e-10 | 4 |