FFCP PHASE1:Hg19::chr17:3867766..3867778,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:3867766..3867778,-
|short_description=p3@ATP2A3
|description=CAGE_peak_3_at_ATP2A3_5end
|association_with_transcript=-8bp_to_NM_005173,NM_174953,NM_174954...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=489 | |EntrezGene=489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=813 | |HGNC=813 | ||
|TSSclassifier=strong | |||
|UniProt=Q93084,G3XAE1 | |UniProt=Q93084,G3XAE1 | ||
|association_with_transcript=-8bp_to_NM_005173,NM_174953,NM_174954,NM_174955,NM_174956,NM_174957,NM_174958_5end | |||
|cluster_id=chr17:3867766..3867778,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_ATP2A3_5end | |||
|id=chr17:3867766..3867778,- | |||
|ontology_enrichment_celltype=CL:0000037!5.77e-58!172;CL:0000566!5.77e-58!172;CL:0000988!1.08e-53!182;CL:0002032!4.72e-53!165;CL:0000837!4.72e-53!165;CL:0000738!2.12e-47!140;CL:0002087!1.71e-40!119;CL:0002031!1.06e-37!124;CL:0000542!3.44e-31!53;CL:0000051!3.44e-31!53;CL:0000838!1.09e-30!52;CL:0000763!2.04e-22!112;CL:0000049!2.04e-22!112;CL:0000766!4.61e-16!76;CL:0000084!1.85e-15!25;CL:0000827!1.85e-15!25;CL:0000791!2.53e-14!18;CL:0000789!2.53e-14!18;CL:0002420!2.53e-14!18;CL:0002419!2.53e-14!18;CL:0000790!2.53e-14!18;CL:0000945!4.34e-14!24;CL:0000826!4.34e-14!24;CL:0000839!1.18e-11!70;CL:0000557!1.53e-11!71;CL:0002194!1.46e-10!63;CL:0000576!1.46e-10!63;CL:0000040!1.46e-10!63;CL:0000559!1.46e-10!63;CL:0000625!7.78e-10!11;CL:0002009!1.02e-09!65;CL:0000236!1.17e-09!14;CL:0002057!1.54e-09!42;CL:0000134!2.44e-09!358;CL:0002320!1.77e-08!365;CL:0000860!1.84e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.28e-26;53!CL:0000084;8.72e-23;25!CL:0000791;4.83e-22;18!CL:0000789;4.83e-22;18!CL:0002419;4.83e-22;18!CL:0000945;5.03e-20;24!CL:0000625;7.39e-15;11!CL:0000236;3.18e-14;13!CL:0002087;5.72e-13;104!CL:0000738;4.35e-12;136!CL:0000988;1.12e-10;177!CL:0000094;2.09e-09;8!CL:0000624;6.52e-08;6!CL:0000763;1.31e-07;100!CL:0000473;5.05e-07;39!CL:0000234;5.05e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.08e-73,168;CL:0000988,5.89e-68,177;CL:0002032,2.46e-66,161;CL:0000837,2.46e-66,161;CL:0000738,2.58e-61,136;CL:0002087,3.09e-50,115;CL:0002031,4.90e-47,120;CL:0000542,9.34e-47,53;CL:0000051,9.34e-47,53;CL:0000838,6.09e-46,52;CL:0000763,2.81e-23,108;CL:0000049,2.81e-23,108;CL:0000084,7.76e-23,25;CL:0000827,7.76e-23,25;CL:0000791,3.68e-22,18;CL:0000789,3.68e-22,18;CL:0002420,3.68e-22,18;CL:0002419,3.68e-22,18;CL:0000790,3.68e-22,18;CL:0000945,2.66e-20,24;CL:0000826,2.66e-20,24;CL:0000134,8.08e-17,354;CL:0000766,2.64e-16,72;CL:0002320,7.62e-16,361;CL:0000625,6.56e-15,11;CL:0000236,4.34e-13,14;CL:0000219,1.75e-12,386;CL:0000557,9.60e-11,67;CL:0000839,3.35e-10,66;CL:0000094,1.43e-09,8;CL:0000048,5.99e-09,427;CL:0000034,6.17e-09,441;CL:0002194,1.19e-08,59;CL:0000576,1.19e-08,59;CL:0000040,1.19e-08,59;CL:0000559,1.19e-08,59;CL:0000723,2.01e-08,433;CL:0002009,4.12e-08,61;CL:0000624,5.80e-08,6;CL:0000473,5.91e-08,48;CL:0000234,5.91e-08,48 | |||
|ontology_enrichment_development_v019=CL:0000051;1.28e-26;53!CL:0000790;4.83e-22;18!CL:0000049;3.18e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!1.04e-14!51;DOID:0060083!1.04e-14!51;DOID:1240!1.15e-12!39;DOID:8692!3.79e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.01e-10;39!DOID:2531;1.40e-09;51!DOID:0060083;1.40e-09;51!DOID:8692;2.37e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.88e-15,51;DOID:0060083,3.88e-15,51;DOID:1240,1.24e-13,39;DOID:8692,1.42e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.09e-19!102;UBERON:0003061!6.09e-19!102;UBERON:0002193!2.76e-16!112;UBERON:0002371!4.58e-10!80;UBERON:0001474!1.81e-08!86;UBERON:0000178!1.87e-08!15;UBERON:0000179!1.87e-08!15;UBERON:0000463!1.87e-08!15;UBERON:0002384!3.09e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-10;15!UBERON:0000179;2.84e-10;15!UBERON:0000463;2.84e-10;15!UBERON:0002390;3.02e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.06e-20,98;UBERON:0003061,3.06e-20,98;UBERON:0002193,9.42e-19,108;UBERON:0002384,1.58e-14,371;UBERON:0002405,7.74e-12,93;UBERON:0000178,2.51e-10,15;UBERON:0000179,2.51e-10,15;UBERON:0000463,2.51e-10,15;UBERON:0002371,1.11e-09,76;UBERON:0001474,2.90e-08,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,2.46301768349837,1.65292640758726,1.96682138424452,2.30297638858328,2.16742572642506,0,0,0,4.33816323249689,1.70603078984906,2.34880351467878,4.43196326825502,3.00816671205213,3.47217393145363,0,1.94336199611388,0,2.03557534291391,1.88937971844405,0.727752183563449,1.39457422143411,2.87817521615278,1.54853185447552,0,1.0246428261164,0.709446689665756,1.72372840368309,1.29096936716765,1.35426486594342,1.12945403725563,1.36453075028923,0.898893937780338,0.612167784741805,0.320929027076094,1.91801137739712,1.31940520074686,0.598390972864896,2.13112375266347,1.16083695451434,0.56738522469114,0,2.00998932205395,1.0429658368404,0.217188844705117,1.21079900526674,0.368277635987565,0.632924774881769,0.633765858935825,1.27562579979026,0.209658645508376,0.786300418025466,1.35159203557356,0.803627933485401,0,0,0,5.27988733383968,4.91524750135918,1.77901850772711,4.69403244823158,6.4063357925762,3.4485146397269,5.2883589822789,6.67837628174755,7.39976859842283,9.39579502993502,6.88091810625412,3.96513985737078,2.80254281490768,1.84368859342554,7.27826149421182,7.8602152549833,6.16804496998528,4.34684888015763,6.8443675993054,6.62826928028627,11.6896037044747,3.56513462032555,1.47302953737419,5.09527957542329,4.33286182024025,4.61128751012431,5.72261129263464,3.4531959966772,8.0141505157896,2.89803085735052,6.3763222159686,6.1534390460634,6.27213142829861,4.41906436520508,4.98186641682498,6.52892146416997,4.55435445635105,6.68987370080603,7.81300144627702,7.60361635558699,5.11955404864427,4.73550461271348,9.99445812418767,8.05042656949657,5.74789597844733,9.87873041801189,8.29064606928873,9.55841065626473,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,2.27183175558278,1.74129737299267,4.25465473660369,7.87019060207628,5.14795419702115,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,19.3890132074163,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.600952235626387,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.731842236777572,0.397589304964456,0.116193942869518,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,2.20731549707325,0.245976877086227,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,1.23108503043699,1.8720341211139,2.67536092119711,0,0,0,0,0,0,0,2.90559832243646,3.52457796419313,5.76479813667846,6.312121671319,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,3.92298003977345,7.09310736726938,7.33133754522359,5.26206448746968,0,0,0,0,0,6.74106321552464,5.9832291840805,8.70272578215674,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,4.34212854858063,4.52999821719095,6.5103810260101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0,2.92278449306521,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0.309123034943167,0,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.459446800413919,3.04468565539302,4.58782324285425,6.83576624608995,5.24109906007136,2.87953591160336,6.48473311192717,3.7802200606668,4.75875105776562,0,0,0.245040215981032,2.22963810150862,1.73123055571734,2.70339004723974,3.98565681822056,1.1974762285969,1.7235483311913,0.635020748171649,1.29848776109822,1.96558024679421,1.59764275323235,2.6635582281414,0,2.37008488922245,1.4452926759333,1.81619736471943,1.70338495076131,3.43505344755765,0.307240764308458,0.447352215784832,0.500547425135725,2.9308214310306,1.39203086947621,0,1.35227839237992,2.33150377598474,0,0.18714054040822,0,0,2.67464122265948,0,0,0,0,0,0.140669416410513,0.445234820091624,0,0,0.597743964753209,2.76283915531148,3.02319297425131,0,3.93871377475422,0,0,0.179021174675609,4.09257896181497,0.197286811273867,4.7896618469388,0,0,0.0927680981618513,0,2.08342208868187,0.437299999980979,0,0.227586896570999,0,0.472775363535873,1.03423011972439,0,0,0,0,0,0.221158519862449,0,0,0,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0.784901281975124,0.997270091400938,1.1279783030859,1.76456280885966,1.00692952185506,0.75901493089674,1.43042921082341,0,0,0.282706142867882,0,1.99052386215701,0.4422878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| ||
|short_description=p3@ATP2A3 | |||
}} | }} |
Latest revision as of 02:29, 20 September 2015
Short description: | p3@ATP2A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP2A3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -8bp_to_NM_005173, NM_174953, NM_174954, NM_174955, NM_174956, NM_174957, NM_174958_5end |
EntrezGene: | ATP2A3 |
HGNC: | 813 |
UniProt: | Q93084G3XAE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.06e-20 | 98 |
blood island | 3.06e-20 | 98 |
hemolymphoid system | 9.42e-19 | 108 |
connective tissue | 1.58e-14 | 371 |
immune system | 7.74e-12 | 93 |
blood | 2.51e-10 | 15 |
haemolymphatic fluid | 2.51e-10 | 15 |
organism substance | 2.51e-10 | 15 |
bone marrow | 1.11e-09 | 76 |
bone element | 2.90e-08 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.88e-15 | 51 |
immune system cancer | 3.88e-15 | 51 |
leukemia | 1.24e-13 | 39 |
myeloid leukemia | 1.42e-08 | 31 |