FFCP PHASE1:Hg19::chr11:69455914..69455932,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=595 | |EntrezGene=595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1582 | |HGNC=1582 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4R3,B4DR06 | |UniProt=F5H4R3,B4DR06 | ||
|association_with_transcript=0bp_to_ENST00000539241,ENST00000542897_5end | |association_with_transcript=0bp_to_ENST00000539241,ENST00000542897_5end | ||
|cluster_id=chr11:69455914..69455932,+ | |||
|coexpression_cluster_id=C1350 | |||
|description=CAGE_peak_1_at_CCND1_5end | |description=CAGE_peak_1_at_CCND1_5end | ||
|id=chr11:69455914..69455932,+ | |id=chr11:69455914..69455932,+ | ||
|ontology_enrichment_celltype=CL:0002321!7.01e-29!248;CL:0000055!7.52e-29!180;CL:0000220!1.04e-28!246;CL:0000222!4.88e-18!119;CL:0000066!1.69e-17!254;CL:0000192!1.74e-16!42;CL:0000514!1.74e-16!42;CL:0000359!3.16e-16!32;CL:0000548!2.24e-14!679;CL:0000004!2.24e-14!679;CL:0000255!2.24e-14!679;CL:0000057!4.46e-14!75;CL:0000680!5.85e-14!57;CL:0000056!5.85e-14!57;CL:0000355!5.85e-14!57;CL:0000012!2.06e-13!682;CL:0000183!4.93e-13!59;CL:0000187!9.55e-13!54;CL:0000393!1.09e-10!60;CL:0000211!1.09e-10!60;CL:0000144!4.40e-10!625;CL:0002371!1.01e-07!591;CL:0002539!1.15e-07!10;CL:0002620!5.07e-07!23 | |ontology_enrichment_celltype=CL:0002321!7.01e-29!248;CL:0000055!7.52e-29!180;CL:0000220!1.04e-28!246;CL:0000222!4.88e-18!119;CL:0000066!1.69e-17!254;CL:0000192!1.74e-16!42;CL:0000514!1.74e-16!42;CL:0000359!3.16e-16!32;CL:0000548!2.24e-14!679;CL:0000004!2.24e-14!679;CL:0000255!2.24e-14!679;CL:0000057!4.46e-14!75;CL:0000680!5.85e-14!57;CL:0000056!5.85e-14!57;CL:0000355!5.85e-14!57;CL:0000012!2.06e-13!682;CL:0000183!4.93e-13!59;CL:0000187!9.55e-13!54;CL:0000393!1.09e-10!60;CL:0000211!1.09e-10!60;CL:0000144!4.40e-10!625;CL:0002371!1.01e-07!591;CL:0002539!1.15e-07!10;CL:0002620!5.07e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.49e-15;32!CL:0000192;5.84e-12;43!CL:0002539;1.12e-07;10!CL:0002620;4.91e-07;23!CL:0000187;6.63e-07;55!CL:1000497;8.47e-07;17!CL:0002518;8.47e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.43e-29,250;CL:0000222,2.25e-18,121;CL:0000066,1.48e-17,253;CL:0000359,3.00e-16,32;CL:0000192,3.04e-16,43;CL:0000514,3.04e-16,43;CL:0000057,1.73e-14,76;CL:0000680,7.89e-14,58;CL:0000056,7.89e-14,58;CL:0000355,7.89e-14,58;CL:0000187,1.27e-12,55;CL:0000393,1.32e-10,61;CL:0000211,1.32e-10,61;CL:0002539,1.13e-07,10;CL:0002620,4.97e-07,23;CL:1000497,8.40e-07,17;CL:0002518,8.40e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;5.84e-12;43!CL:0000355;2.19e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.86e-24!216;UBERON:0005256!2.42e-21!143;UBERON:0003914!2.88e-21!118;UBERON:0002049!3.01e-20!79;UBERON:0007798!3.01e-20!79;UBERON:0000475!3.68e-20!365;UBERON:0000055!9.54e-20!69;UBERON:0001981!3.37e-18!60;UBERON:0007500!3.37e-18!60;UBERON:0004537!3.37e-18!60;UBERON:0006965!3.37e-18!60;UBERON:0001637!2.20e-17!42;UBERON:0003509!2.20e-17!42;UBERON:0004572!2.20e-17!42;UBERON:0003104!6.37e-17!238;UBERON:0009142!6.37e-17!238;UBERON:0000468!2.88e-16!659;UBERON:0000490!3.25e-16!138;UBERON:0000914!3.20e-15!83;UBERON:0002329!3.20e-15!83;UBERON:0003077!3.20e-15!83;UBERON:0003059!3.20e-15!83;UBERON:0007282!3.20e-15!83;UBERON:0009618!3.20e-15!83;UBERON:0007285!3.20e-15!83;UBERON:0004573!3.88e-15!33;UBERON:0004571!3.88e-15!33;UBERON:0004872!4.51e-15!84;UBERON:0000486!1.46e-14!82;UBERON:0004290!9.59e-14!70;UBERON:0000119!4.22e-13!312;UBERON:0000483!1.27e-12!309;UBERON:0000481!4.99e-12!347;UBERON:0001134!6.70e-12!61;UBERON:0002036!6.70e-12!61;UBERON:0003082!6.70e-12!61;UBERON:0000467!1.44e-11!625;UBERON:0000480!2.46e-11!626;UBERON:0002385!3.20e-11!63;UBERON:0001015!3.20e-11!63;UBERON:0000383!3.20e-11!63;UBERON:0003102!6.35e-11!95;UBERON:0004535!1.14e-10!110;UBERON:0001009!3.32e-10!113;UBERON:0009569!4.56e-10!113;UBERON:0004111!1.13e-09!241;UBERON:0000947!4.16e-09!21;UBERON:0010191!4.16e-09!21;UBERON:0000477!4.51e-09!286;UBERON:0000466!5.57e-08!126;UBERON:0002199!7.39e-08!45;UBERON:0002416!7.39e-08!45;UBERON:0004237!1.15e-07!10;UBERON:0004695!1.15e-07!10;UBERON:0002111!1.15e-07!10;UBERON:0004178!1.15e-07!10;UBERON:0000922!1.38e-07!612;UBERON:0000923!1.79e-07!604;UBERON:0005291!1.79e-07!604;UBERON:0006598!1.79e-07!604;UBERON:0002532!1.79e-07!604;UBERON:0002050!2.14e-07!605;UBERON:0005423!2.14e-07!605;UBERON:0002097!2.34e-07!40 | |ontology_enrichment_uberon=UBERON:0002100!1.86e-24!216;UBERON:0005256!2.42e-21!143;UBERON:0003914!2.88e-21!118;UBERON:0002049!3.01e-20!79;UBERON:0007798!3.01e-20!79;UBERON:0000475!3.68e-20!365;UBERON:0000055!9.54e-20!69;UBERON:0001981!3.37e-18!60;UBERON:0007500!3.37e-18!60;UBERON:0004537!3.37e-18!60;UBERON:0006965!3.37e-18!60;UBERON:0001637!2.20e-17!42;UBERON:0003509!2.20e-17!42;UBERON:0004572!2.20e-17!42;UBERON:0003104!6.37e-17!238;UBERON:0009142!6.37e-17!238;UBERON:0000468!2.88e-16!659;UBERON:0000490!3.25e-16!138;UBERON:0000914!3.20e-15!83;UBERON:0002329!3.20e-15!83;UBERON:0003077!3.20e-15!83;UBERON:0003059!3.20e-15!83;UBERON:0007282!3.20e-15!83;UBERON:0009618!3.20e-15!83;UBERON:0007285!3.20e-15!83;UBERON:0004573!3.88e-15!33;UBERON:0004571!3.88e-15!33;UBERON:0004872!4.51e-15!84;UBERON:0000486!1.46e-14!82;UBERON:0004290!9.59e-14!70;UBERON:0000119!4.22e-13!312;UBERON:0000483!1.27e-12!309;UBERON:0000481!4.99e-12!347;UBERON:0001134!6.70e-12!61;UBERON:0002036!6.70e-12!61;UBERON:0003082!6.70e-12!61;UBERON:0000467!1.44e-11!625;UBERON:0000480!2.46e-11!626;UBERON:0002385!3.20e-11!63;UBERON:0001015!3.20e-11!63;UBERON:0000383!3.20e-11!63;UBERON:0003102!6.35e-11!95;UBERON:0004535!1.14e-10!110;UBERON:0001009!3.32e-10!113;UBERON:0009569!4.56e-10!113;UBERON:0004111!1.13e-09!241;UBERON:0000947!4.16e-09!21;UBERON:0010191!4.16e-09!21;UBERON:0000477!4.51e-09!286;UBERON:0000466!5.57e-08!126;UBERON:0002199!7.39e-08!45;UBERON:0002416!7.39e-08!45;UBERON:0004237!1.15e-07!10;UBERON:0004695!1.15e-07!10;UBERON:0002111!1.15e-07!10;UBERON:0004178!1.15e-07!10;UBERON:0000922!1.38e-07!612;UBERON:0000923!1.79e-07!604;UBERON:0005291!1.79e-07!604;UBERON:0006598!1.79e-07!604;UBERON:0002532!1.79e-07!604;UBERON:0002050!2.14e-07!605;UBERON:0005423!2.14e-07!605;UBERON:0002097!2.34e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.34e-14;33!UBERON:0004571;9.34e-14;33!UBERON:0001637;2.63e-12;42!UBERON:0003509;2.63e-12;42!UBERON:0004572;2.63e-12;42!UBERON:0007500;1.48e-10;56!UBERON:0001981;1.48e-10;56!UBERON:0004537;1.48e-10;56!UBERON:0003914;4.67e-10;74!UBERON:0000055;1.34e-09;65!UBERON:0000947;4.02e-09;21!UBERON:0010191;4.02e-09;21!UBERON:0002049;8.90e-09;75!UBERON:0007798;8.90e-09;75!UBERON:0004237;1.12e-07;10!UBERON:0004695;1.12e-07;10!UBERON:0002111;1.12e-07;10!UBERON:0004178;1.12e-07;10 | |||
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| ||
|short_description=p1@CCND1 | |short_description=p1@CCND1 | ||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p1@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCND1_5end |
Coexpression cluster: | C1350_neuroectodermal_neuroblastoma_Melanocyte_Smooth_leiomyoma_hepatoma_mesenchymal |
Association with transcript: | 0bp_to_ENST00000539241, ENST00000542897_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | F5H4R3B4DR06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.43e-29 | 250 |
mesodermal cell | 2.25e-18 | 121 |
epithelial cell | 1.48e-17 | 253 |
vascular associated smooth muscle cell | 3.00e-16 | 32 |
smooth muscle cell | 3.04e-16 | 43 |
smooth muscle myoblast | 3.04e-16 | 43 |
fibroblast | 1.73e-14 | 76 |
muscle precursor cell | 7.89e-14 | 58 |
myoblast | 7.89e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.89e-14 | 58 |
muscle cell | 1.27e-12 | 55 |
electrically responsive cell | 1.32e-10 | 61 |
electrically active cell | 1.32e-10 | 61 |
aortic smooth muscle cell | 1.13e-07 | 10 |
skin fibroblast | 4.97e-07 | 23 |
kidney cell | 8.40e-07 | 17 |
kidney epithelial cell | 8.40e-07 | 17 |