FFCP PHASE1:Hg19::chr17:73717223..73717239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3691 | |EntrezGene=3691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6158 | |HGNC=6158 | ||
|TSSclassifier=strong | |||
|UniProt=P16144,A0AVL6 | |UniProt=P16144,A0AVL6 | ||
|association_with_transcript=-276bp_to_ENST00000200181,ENST00000339591,NM_000213,NM_001005731,uc002jpg.2,uc002jph.2_5end | |association_with_transcript=-276bp_to_ENST00000200181,ENST00000339591,NM_000213,NM_001005731,uc002jpg.2,uc002jph.2_5end | ||
|cluster_id=chr17:73717223..73717239,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_ITGB4_5end | |description=CAGE_peak_6_at_ITGB4_5end | ||
|id=chr17:73717223..73717239,+ | |id=chr17:73717223..73717239,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.18e-07!7;CL:0000126!1.18e-07!7;CL:0000127!1.18e-07!7;CL:0002453!1.18e-07!7 | |ontology_enrichment_celltype=CL:0000128!1.18e-07!7;CL:0000126!1.18e-07!7;CL:0000127!1.18e-07!7;CL:0002453!1.18e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.05e-08;7!CL:0000126;1.05e-08;7!CL:0000127;1.05e-08;7!CL:0002603;4.58e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,7.68e-09,7;CL:0000126,7.68e-09,7;CL:0000127,7.68e-09,7;CL:0002453,7.68e-09,7;CL:0002603,3.03e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.79e-16;82!UBERON:0006241;4.32e-09;3!UBERON:0003057;4.32e-09;3!UBERON:0006215;4.92e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.73e-54!86;UBERON:0007284!5.73e-54!86;UBERON:0007023!2.21e-53!115;UBERON:0001049!3.10e-52!57;UBERON:0005068!3.10e-52!57;UBERON:0006241!3.10e-52!57;UBERON:0007135!3.10e-52!57;UBERON:0005743!6.33e-51!86;UBERON:0002346!2.76e-50!90;UBERON:0001017!1.55e-47!82;UBERON:0000033!4.15e-47!123;UBERON:0000955!2.92e-46!69;UBERON:0006238!2.92e-46!69;UBERON:0002616!3.21e-46!59;UBERON:0000153!1.20e-45!129;UBERON:0007811!1.20e-45!129;UBERON:0000073!3.05e-45!94;UBERON:0001016!3.05e-45!94;UBERON:0004121!4.91e-44!169;UBERON:0000924!3.63e-42!173;UBERON:0006601!3.63e-42!173;UBERON:0002780!5.48e-37!41;UBERON:0001890!5.48e-37!41;UBERON:0006240!5.48e-37!41;UBERON:0003056!7.16e-36!61;UBERON:0003080!9.94e-36!42;UBERON:0002020!4.27e-31!34;UBERON:0003528!4.27e-31!34;UBERON:0001893!4.63e-31!34;UBERON:0002791!4.06e-30!33;UBERON:0001869!6.44e-29!32;UBERON:0000956!1.18e-21!25;UBERON:0000203!1.18e-21!25;UBERON:0000475!5.16e-19!365;UBERON:0002619!6.58e-19!22;UBERON:0000481!9.28e-18!347;UBERON:0000483!1.00e-17!309;UBERON:0000119!1.12e-17!312;UBERON:0003076!2.62e-17!15;UBERON:0003057!2.62e-17!15;UBERON:0001950!8.79e-17!20;UBERON:0000477!2.34e-16!286;UBERON:0000062!1.52e-15!511;UBERON:0004111!2.10e-15!241;UBERON:0004732!6.86e-15!13;UBERON:0000064!2.53e-14!219;UBERON:0004733!6.62e-14!12;UBERON:0002028!6.62e-14!12;UBERON:0007277!6.62e-14!12;UBERON:0000467!1.47e-13!625;UBERON:0000922!1.66e-13!612;UBERON:0000480!1.89e-13!626;UBERON:0000923!2.73e-13!604;UBERON:0005291!2.73e-13!604;UBERON:0006598!2.73e-13!604;UBERON:0002532!2.73e-13!604;UBERON:0002050!3.51e-13!605;UBERON:0005423!3.51e-13!605;UBERON:0000025!7.78e-13!194;UBERON:0000468!1.78e-12!659;UBERON:0002420!4.87e-11!9;UBERON:0007245!4.87e-11!9;UBERON:0010009!4.87e-11!9;UBERON:0010011!4.87e-11!9;UBERON:0000454!4.87e-11!9;UBERON:0002308!5.84e-11!9;UBERON:0000125!5.84e-11!9;UBERON:0002680!1.78e-10!9;UBERON:0001895!1.78e-10!9;UBERON:0010092!1.78e-10!9;UBERON:0009663!7.25e-09!7;UBERON:0002298!1.28e-07!8;UBERON:0000200!1.74e-07!6;UBERON:0002037!1.74e-07!6;UBERON:0006215!1.74e-07!6;UBERON:0001894!2.90e-07!7;UBERON:0006222!2.90e-07!7;UBERON:0000349!6.14e-07!5;UBERON:0001032!7.96e-07!24;UBERON:0004456!7.96e-07!24 | |ontology_enrichment_uberon=UBERON:0003075!5.73e-54!86;UBERON:0007284!5.73e-54!86;UBERON:0007023!2.21e-53!115;UBERON:0001049!3.10e-52!57;UBERON:0005068!3.10e-52!57;UBERON:0006241!3.10e-52!57;UBERON:0007135!3.10e-52!57;UBERON:0005743!6.33e-51!86;UBERON:0002346!2.76e-50!90;UBERON:0001017!1.55e-47!82;UBERON:0000033!4.15e-47!123;UBERON:0000955!2.92e-46!69;UBERON:0006238!2.92e-46!69;UBERON:0002616!3.21e-46!59;UBERON:0000153!1.20e-45!129;UBERON:0007811!1.20e-45!129;UBERON:0000073!3.05e-45!94;UBERON:0001016!3.05e-45!94;UBERON:0004121!4.91e-44!169;UBERON:0000924!3.63e-42!173;UBERON:0006601!3.63e-42!173;UBERON:0002780!5.48e-37!41;UBERON:0001890!5.48e-37!41;UBERON:0006240!5.48e-37!41;UBERON:0003056!7.16e-36!61;UBERON:0003080!9.94e-36!42;UBERON:0002020!4.27e-31!34;UBERON:0003528!4.27e-31!34;UBERON:0001893!4.63e-31!34;UBERON:0002791!4.06e-30!33;UBERON:0001869!6.44e-29!32;UBERON:0000956!1.18e-21!25;UBERON:0000203!1.18e-21!25;UBERON:0000475!5.16e-19!365;UBERON:0002619!6.58e-19!22;UBERON:0000481!9.28e-18!347;UBERON:0000483!1.00e-17!309;UBERON:0000119!1.12e-17!312;UBERON:0003076!2.62e-17!15;UBERON:0003057!2.62e-17!15;UBERON:0001950!8.79e-17!20;UBERON:0000477!2.34e-16!286;UBERON:0000062!1.52e-15!511;UBERON:0004111!2.10e-15!241;UBERON:0004732!6.86e-15!13;UBERON:0000064!2.53e-14!219;UBERON:0004733!6.62e-14!12;UBERON:0002028!6.62e-14!12;UBERON:0007277!6.62e-14!12;UBERON:0000467!1.47e-13!625;UBERON:0000922!1.66e-13!612;UBERON:0000480!1.89e-13!626;UBERON:0000923!2.73e-13!604;UBERON:0005291!2.73e-13!604;UBERON:0006598!2.73e-13!604;UBERON:0002532!2.73e-13!604;UBERON:0002050!3.51e-13!605;UBERON:0005423!3.51e-13!605;UBERON:0000025!7.78e-13!194;UBERON:0000468!1.78e-12!659;UBERON:0002420!4.87e-11!9;UBERON:0007245!4.87e-11!9;UBERON:0010009!4.87e-11!9;UBERON:0010011!4.87e-11!9;UBERON:0000454!4.87e-11!9;UBERON:0002308!5.84e-11!9;UBERON:0000125!5.84e-11!9;UBERON:0002680!1.78e-10!9;UBERON:0001895!1.78e-10!9;UBERON:0010092!1.78e-10!9;UBERON:0009663!7.25e-09!7;UBERON:0002298!1.28e-07!8;UBERON:0000200!1.74e-07!6;UBERON:0002037!1.74e-07!6;UBERON:0006215!1.74e-07!6;UBERON:0001894!2.90e-07!7;UBERON:0006222!2.90e-07!7;UBERON:0000349!6.14e-07!5;UBERON:0001032!7.96e-07!24;UBERON:0004456!7.96e-07!24 | ||
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| ||
|short_description=p6@ITGB4 | |short_description=p6@ITGB4 | ||
}} | }} |
Latest revision as of 11:56, 17 September 2015
Short description: | p6@ITGB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -276bp_to_ENST00000200181, ENST00000339591, NM_000213, NM_001005731, uc002jpg.2, uc002jph.2_5end |
EntrezGene: | ITGB4 |
HGNC: | 6158 |
UniProt: | P16144A0AVL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 7.68e-09 | 7 |
macroglial cell | 7.68e-09 | 7 |
astrocyte | 7.68e-09 | 7 |
oligodendrocyte precursor cell | 7.68e-09 | 7 |
astrocyte of the cerebellum | 3.03e-08 | 3 |