FFCP PHASE1:Hg19::chr17:4890649..4890664,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:4890649..4890664,-
|short_description=p5@CAMTA2
|description=CAGE_peak_5_at_CAMTA2_5end
|association_with_transcript=0bp_to_ENST00000361571,ENST0000041404...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23125 | |EntrezGene=23125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18807 | |HGNC=18807 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWU5,O94983 | |UniProt=E7EWU5,O94983 | ||
|association_with_transcript=0bp_to_ENST00000361571,ENST00000414043,NM_001171167,NM_001171168,uc002gag.1,uc010cku.1_5end | |||
|cluster_id=chr17:4890649..4890664,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_5_at_CAMTA2_5end | |||
|id=chr17:4890649..4890664,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002596;1.33e-09;2!CL:0002593;1.33e-09;2!CL:0002144;8.14e-07;3!CL:0000307;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,9.46e-10,2;CL:0002593,1.22e-09,2;CL:0002144,6.88e-07,3;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.20e-07;10!UBERON:0007687;1.20e-07;10!CL:0000377;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.36e-18;1!UBERON:0002456;1.33e-09;2!UBERON:0005396;1.33e-09;2!UBERON:0010523;8.14e-07;3!UBERON:0001915;8.14e-07;3!UBERON:0001982;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.03e-17,1;UBERON:0005396,9.46e-10,2;UBERON:0002456,1.22e-09,2;UBERON:0010523,6.88e-07,3;UBERON:0001915,6.88e-07,3;UBERON:0001982,6.88e-07,3 | |||
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| ||
|short_description=p5@CAMTA2 | |||
}} | }} |
Latest revision as of 04:15, 16 September 2015
Short description: | p5@CAMTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAMTA2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 0bp_to_ENST00000361571, ENST00000414043, NM_001171167, NM_001171168, uc002gag.1, uc010cku.1_5end |
EntrezGene: | CAMTA2 |
HGNC: | 18807 |
UniProt: | E7EWU5O94983 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 9.46e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.22e-09 | 2 |
capillary endothelial cell | 6.88e-07 | 3 |
duct epithelial cell | 9.64e-07 | 3 |
branched duct epithelial cell | 9.64e-07 | 3 |
tracheal epithelial cell | 9.64e-07 | 3 |
tracheoblast | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.03e-17 | 1 |
carotid artery segment | 9.46e-10 | 2 |
internal thoracic artery | 1.22e-09 | 2 |
microcirculatory vessel | 6.88e-07 | 3 |
endothelium of capillary | 6.88e-07 | 3 |
capillary | 6.88e-07 | 3 |