FFCP PHASE1:Hg19::chr10:106205565..106205599,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:106205565..106205599,+ | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_at_chr10:106205565..106205599,+ | |description=CAGE_peak_at_chr10:106205565..106205599,+ | ||
|id=chr10:106205565..106205599,+ | |id=chr10:106205565..106205599,+ | ||
|ontology_enrichment_celltype=CL:0002166!4.49e-44!3;CL:0002159!2.13e-27!13;CL:0002621!4.02e-20!3;CL:0000312!4.44e-12!5;CL:0002077!7.96e-11!33;CL:0000240!3.19e-10!6;CL:0000311!3.19e-10!6;CL:0000079!3.19e-10!6;CL:0000237!3.19e-10!6;CL:0000036!3.19e-10!6;CL:0000357!3.19e-10!6;CL:0000114!3.19e-10!6;CL:0000221!5.00e-09!71;CL:0002535!2.15e-08!2;CL:0000362!6.86e-08!8 | |ontology_enrichment_celltype=CL:0002166!4.49e-44!3;CL:0002159!2.13e-27!13;CL:0002621!4.02e-20!3;CL:0000312!4.44e-12!5;CL:0002077!7.96e-11!33;CL:0000240!3.19e-10!6;CL:0000311!3.19e-10!6;CL:0000079!3.19e-10!6;CL:0000237!3.19e-10!6;CL:0000036!3.19e-10!6;CL:0000357!3.19e-10!6;CL:0000114!3.19e-10!6;CL:0000221!5.00e-09!71;CL:0002535!2.15e-08!2;CL:0000362!6.86e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002166;8.98e-131;3!CL:0002159;2.55e-29;14!CL:0002077;1.65e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.98e-131,3;CL:0002159,2.55e-29,14;CL:0002077,6.62e-13,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!2.89e-33!4;UBERON:0001704!2.89e-33!4;UBERON:0002090!1.97e-22!6;UBERON:0001949!4.02e-20!3;UBERON:0003129!1.56e-12!11;UBERON:0000075!1.08e-10!13;UBERON:0005944!1.08e-10!13;UBERON:0004288!1.08e-10!13;UBERON:0003089!1.08e-10!13;UBERON:0006955!2.15e-08!2;UBERON:0004801!2.15e-08!2;UBERON:0001828!3.90e-08!8 | |ontology_enrichment_uberon=UBERON:0001708!2.89e-33!4;UBERON:0001704!2.89e-33!4;UBERON:0002090!1.97e-22!6;UBERON:0001949!4.02e-20!3;UBERON:0003129!1.56e-12!11;UBERON:0000075!1.08e-10!13;UBERON:0005944!1.08e-10!13;UBERON:0004288!1.08e-10!13;UBERON:0003089!1.08e-10!13;UBERON:0006955!2.15e-08!2;UBERON:0004801!2.15e-08!2;UBERON:0001828!3.90e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.55e-98;4!UBERON:0008895;1.55e-98;4!UBERON:0011159;3.49e-79;5!UBERON:0011137;6.80e-37;11!UBERON:0010323;6.80e-37;11!UBERON:0000075;7.63e-26;16!UBERON:0004765;1.86e-16;26!UBERON:0001434;1.76e-12;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.55e-98,4;UBERON:0008895,1.55e-98,4;UBERON:0011159,3.49e-79,5;UBERON:0010188,2.83e-66,6;UBERON:0002539,2.83e-66,6;UBERON:0008816,2.83e-66,6;UBERON:0010323,6.80e-37,11;UBERON:0011137,2.55e-29,14;UBERON:0000075,7.63e-26,16;UBERON:0008814,3.88e-23,18;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
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|short_description=p@chr10:106205565..106205599,+ | |short_description=p@chr10:106205565..106205599,+ | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p@chr10:106205565..106205599, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106205565..106205599, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 8.98e-131 | 3 |
general ecto-epithelial cell | 2.55e-29 | 14 |
ecto-epithelial cell | 6.62e-13 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.55e-98 | 4 |
splanchnocranium | 1.55e-98 | 4 |
primary subdivision of cranial skeletal system | 3.49e-79 | 5 |
protuberance | 2.83e-66 | 6 |
pharyngeal arch | 2.83e-66 | 6 |
embryonic head | 2.83e-66 | 6 |
cranial skeletal system | 6.80e-37 | 11 |
axial skeletal system | 2.55e-29 | 14 |
subdivision of skeletal system | 7.63e-26 | 16 |
pharyngeal arch system | 3.88e-23 | 18 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |