FFCP PHASE1:Hg19::chr10:52339649..52339671,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:52339649..52339671,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_at_chr10:52339649..52339671,- | |description=CAGE_peak_at_chr10:52339649..52339671,- | ||
|id=chr10:52339649..52339671,- | |id=chr10:52339649..52339671,- | ||
|ontology_enrichment_celltype=CL:0000039!7.81e-12!7;CL:0000586!7.81e-12!7;CL:0002541!5.49e-11!3 | |ontology_enrichment_celltype=CL:0000039!7.81e-12!7;CL:0000586!7.81e-12!7;CL:0002541!5.49e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.63e-13;3!CL:0000039;1.45e-12;7!CL:0000586;1.45e-12;7!CL:0002563;5.71e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.40e-13,3;CL:0000039,1.45e-12,7;CL:0000586,1.45e-12,7;CL:0002563,5.97e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.73e-11;1!UBERON:0005754;8.14e-11;1!UBERON:0000358;3.01e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;1.98e-10;1!DOID:10165;1.98e-10;1!DOID:1798;1.98e-10;1!DOID:178;3.01e-10;1!DOID:326;3.01e-10;1!DOID:3978;3.01e-10;1!DOID:3394;3.01e-10;1!DOID:5844;3.01e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.08e-10,1;DOID:10165,2.08e-10,1;DOID:1798,2.08e-10,1;DOID:178,3.01e-10,1;DOID:326,3.01e-10,1;DOID:3978,3.01e-10,1;DOID:3394,3.01e-10,1;DOID:5844,3.01e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.25e-13!11;UBERON:0006947!1.86e-11!3;UBERON:0004054!1.86e-11!3;UBERON:0005631!3.55e-11!14;UBERON:0000158!3.55e-11!14;UBERON:0000476!5.49e-11!3;UBERON:0000920!5.49e-11!3;UBERON:0003101!1.65e-10!22;UBERON:0000079!1.65e-10!22;UBERON:0005904!1.11e-08!4;UBERON:0003124!3.43e-08!7;UBERON:0000478!6.99e-08!24 | |ontology_enrichment_uberon=UBERON:0003135!1.25e-13!11;UBERON:0006947!1.86e-11!3;UBERON:0004054!1.86e-11!3;UBERON:0005631!3.55e-11!14;UBERON:0000158!3.55e-11!14;UBERON:0000476!5.49e-11!3;UBERON:0000920!5.49e-11!3;UBERON:0003101!1.65e-10!22;UBERON:0000079!1.65e-10!22;UBERON:0005904!1.11e-08!4;UBERON:0003124!3.43e-08!7;UBERON:0000478!6.99e-08!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.33e-13;3!UBERON:0004054;1.33e-13;3!UBERON:0003124;7.63e-13;3!UBERON:0000920;7.63e-13;3!UBERON:0001000;7.40e-11;1!UBERON:0005352;7.40e-11;1!UBERON:0000998;8.14e-11;1!UBERON:0006868;8.14e-11;1!UBERON:0005904;1.99e-10;4!UBERON:0007029;2.28e-10;1!UBERON:0001052;5.46e-10;4!UBERON:0001242;5.71e-10;4!UBERON:0001262;5.71e-10;4!UBERON:0004786;5.71e-10;4!UBERON:0004808;5.71e-10;4!UBERON:0001277;5.71e-10;4!UBERON:0000478;2.39e-09;24!UBERON:0005631;1.12e-08;10!UBERON:0000158;1.12e-08;10!UBERON:0004907;3.65e-08;5!UBERON:0003937;2.53e-07;12!UBERON:0005399;2.53e-07;12!UBERON:0003101;7.67e-07;22!UBERON:0000079;7.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.33e-13,3;UBERON:0004054,1.33e-13,3;UBERON:0000920,7.40e-13,3;UBERON:0003124,2.60e-12,7;UBERON:0001000,7.40e-11,1;UBERON:0005352,7.40e-11,1;UBERON:0000998,8.14e-11,1;UBERON:0006868,8.14e-11,1;UBERON:0005631,1.14e-10,14;UBERON:0000158,1.14e-10,14;UBERON:0005904,1.99e-10,4;UBERON:0007029,2.28e-10,1;UBERON:0001052,5.71e-10,4;UBERON:0001242,5.97e-10,4;UBERON:0001262,5.97e-10,4;UBERON:0004786,5.97e-10,4;UBERON:0004808,5.97e-10,4;UBERON:0001277,5.97e-10,4;UBERON:0000478,2.46e-09,24;UBERON:0004907,3.78e-08,5;UBERON:0001046,9.95e-08,19;UBERON:0003937,2.47e-07,12;UBERON:0005399,2.47e-07,12;UBERON:0003101,7.55e-07,22;UBERON:0000079,7.55e-07,22 | |||
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| ||
|short_description=p@chr10:52339649..52339671,- | |short_description=p@chr10:52339649..52339671,- | ||
}} | }} |
Latest revision as of 14:06, 23 July 2015
Short description: | p@chr10:52339649..52339671, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52339649..52339671, - |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.40e-13 | 3 |
germ line cell | 1.45e-12 | 7 |
germ cell | 1.45e-12 | 7 |
intestinal epithelial cell | 5.97e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.33e-13 | 3 |
internal male genitalia | 1.33e-13 | 3 |
egg chorion | 7.40e-13 | 3 |
chorion | 2.60e-12 | 7 |
vas deferens | 7.40e-11 | 1 |
spermatic cord | 7.40e-11 | 1 |
seminal vesicle | 8.14e-11 | 1 |
seminal fluid secreting gland | 8.14e-11 | 1 |
extraembryonic membrane | 1.14e-10 | 14 |
membranous layer | 1.14e-10 | 14 |
duct of male reproductive system | 1.99e-10 | 4 |
surface | 2.28e-10 | 1 |
rectum | 5.71e-10 | 4 |
intestinal mucosa | 5.97e-10 | 4 |
wall of intestine | 5.97e-10 | 4 |
gastrointestinal system mucosa | 5.97e-10 | 4 |
gastrointestinal system epithelium | 5.97e-10 | 4 |
intestinal epithelium | 5.97e-10 | 4 |
extraembryonic structure | 2.46e-09 | 24 |
lower digestive tract | 3.78e-08 | 5 |
hindgut | 9.95e-08 | 19 |
sex gland | 2.47e-07 | 12 |
male reproductive gland | 2.47e-07 | 12 |
male organism | 7.55e-07 | 22 |
male reproductive system | 7.55e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.08e-10 | 1 |
endocrine pancreas cancer | 2.08e-10 | 1 |
pancreatic endocrine carcinoma | 2.08e-10 | 1 |
vascular disease | 3.01e-10 | 1 |
ischemia | 3.01e-10 | 1 |
extrinsic cardiomyopathy | 3.01e-10 | 1 |
myocardial ischemia | 3.01e-10 | 1 |
myocardial infarction | 3.01e-10 | 1 |