FFCP PHASE1:Hg19::chr10:681520..681525,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:681520..681525,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_at_chr10:681520..681525,- | |description=CAGE_peak_at_chr10:681520..681525,- | ||
|id=chr10:681520..681525,- | |id=chr10:681520..681525,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.53e-76!57;UBERON:0005068!3.53e-76!57;UBERON:0006241!3.53e-76!57;UBERON:0007135!3.53e-76!57;UBERON:0002780!2.72e-69!41;UBERON:0001890!2.72e-69!41;UBERON:0006240!2.72e-69!41;UBERON:0002616!1.68e-68!59;UBERON:0003080!1.50e-67!42;UBERON:0000955!1.96e-65!69;UBERON:0006238!1.96e-65!69;UBERON:0002020!2.77e-64!34;UBERON:0003528!2.77e-64!34;UBERON:0001893!3.44e-64!34;UBERON:0002791!2.85e-60!33;UBERON:0001017!5.23e-58!82;UBERON:0001869!6.44e-56!32;UBERON:0005743!4.63e-55!86;UBERON:0000073!2.56e-49!94;UBERON:0001016!2.56e-49!94;UBERON:0007023!6.18e-49!115;UBERON:0003075!1.37e-48!86;UBERON:0007284!1.37e-48!86;UBERON:0002346!3.67e-46!90;UBERON:0002619!1.16e-45!22;UBERON:0003056!4.19e-45!61;UBERON:0000956!5.26e-40!25;UBERON:0000203!5.26e-40!25;UBERON:0001950!1.93e-37!20;UBERON:0000033!1.15e-36!123;UBERON:0000153!1.13e-34!129;UBERON:0007811!1.13e-34!129;UBERON:0002308!1.33e-26!9;UBERON:0000125!1.33e-26!9;UBERON:0004121!8.44e-25!169;UBERON:0000924!4.45e-24!173;UBERON:0006601!4.45e-24!173;UBERON:0002298!1.86e-21!8;UBERON:0000200!7.21e-21!6;UBERON:0002420!7.57e-20!9;UBERON:0007245!7.57e-20!9;UBERON:0010009!7.57e-20!9;UBERON:0010011!7.57e-20!9;UBERON:0000454!7.57e-20!9;UBERON:0000025!5.57e-18!194;UBERON:0009663!5.97e-18!7;UBERON:0000349!1.37e-16!5;UBERON:0002771!3.46e-16!3;UBERON:0001871!5.85e-16!7;UBERON:0006331!7.01e-16!3;UBERON:0000988!2.55e-15!3;UBERON:0004111!3.44e-13!241;UBERON:0001897!9.75e-12!2;UBERON:0000369!1.11e-11!4;UBERON:0002435!1.11e-11!4;UBERON:0000204!1.11e-11!4;UBERON:0010082!1.11e-11!4;UBERON:0001954!3.02e-11!2;UBERON:0003022!3.02e-11!2;UBERON:0002421!3.02e-11!2;UBERON:0002600!3.02e-11!2;UBERON:0003076!4.51e-11!15;UBERON:0003057!4.51e-11!15;UBERON:0000477!5.24e-11!286;UBERON:0002148!5.26e-11!2;UBERON:0009662!5.26e-11!2;UBERON:0000064!2.06e-10!219;UBERON:0004733!7.45e-10!12;UBERON:0002028!7.45e-10!12;UBERON:0007277!7.45e-10!12;UBERON:0001872!1.32e-09!5;UBERON:0002021!1.32e-09!5;UBERON:0000475!1.78e-09!365;UBERON:0004732!4.46e-09!13;UBERON:0000483!7.74e-09!309;UBERON:0000119!1.09e-08!312;UBERON:0005383!1.81e-07!3;UBERON:0005382!1.81e-07!3;UBERON:0001894!2.75e-07!7;UBERON:0006222!2.75e-07!7;UBERON:0001896!3.45e-07!3;UBERON:0005290!3.45e-07!3;UBERON:0010096!3.45e-07!3;UBERON:0000062!3.61e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!3.53e-76!57;UBERON:0005068!3.53e-76!57;UBERON:0006241!3.53e-76!57;UBERON:0007135!3.53e-76!57;UBERON:0002780!2.72e-69!41;UBERON:0001890!2.72e-69!41;UBERON:0006240!2.72e-69!41;UBERON:0002616!1.68e-68!59;UBERON:0003080!1.50e-67!42;UBERON:0000955!1.96e-65!69;UBERON:0006238!1.96e-65!69;UBERON:0002020!2.77e-64!34;UBERON:0003528!2.77e-64!34;UBERON:0001893!3.44e-64!34;UBERON:0002791!2.85e-60!33;UBERON:0001017!5.23e-58!82;UBERON:0001869!6.44e-56!32;UBERON:0005743!4.63e-55!86;UBERON:0000073!2.56e-49!94;UBERON:0001016!2.56e-49!94;UBERON:0007023!6.18e-49!115;UBERON:0003075!1.37e-48!86;UBERON:0007284!1.37e-48!86;UBERON:0002346!3.67e-46!90;UBERON:0002619!1.16e-45!22;UBERON:0003056!4.19e-45!61;UBERON:0000956!5.26e-40!25;UBERON:0000203!5.26e-40!25;UBERON:0001950!1.93e-37!20;UBERON:0000033!1.15e-36!123;UBERON:0000153!1.13e-34!129;UBERON:0007811!1.13e-34!129;UBERON:0002308!1.33e-26!9;UBERON:0000125!1.33e-26!9;UBERON:0004121!8.44e-25!169;UBERON:0000924!4.45e-24!173;UBERON:0006601!4.45e-24!173;UBERON:0002298!1.86e-21!8;UBERON:0000200!7.21e-21!6;UBERON:0002420!7.57e-20!9;UBERON:0007245!7.57e-20!9;UBERON:0010009!7.57e-20!9;UBERON:0010011!7.57e-20!9;UBERON:0000454!7.57e-20!9;UBERON:0000025!5.57e-18!194;UBERON:0009663!5.97e-18!7;UBERON:0000349!1.37e-16!5;UBERON:0002771!3.46e-16!3;UBERON:0001871!5.85e-16!7;UBERON:0006331!7.01e-16!3;UBERON:0000988!2.55e-15!3;UBERON:0004111!3.44e-13!241;UBERON:0001897!9.75e-12!2;UBERON:0000369!1.11e-11!4;UBERON:0002435!1.11e-11!4;UBERON:0000204!1.11e-11!4;UBERON:0010082!1.11e-11!4;UBERON:0001954!3.02e-11!2;UBERON:0003022!3.02e-11!2;UBERON:0002421!3.02e-11!2;UBERON:0002600!3.02e-11!2;UBERON:0003076!4.51e-11!15;UBERON:0003057!4.51e-11!15;UBERON:0000477!5.24e-11!286;UBERON:0002148!5.26e-11!2;UBERON:0009662!5.26e-11!2;UBERON:0000064!2.06e-10!219;UBERON:0004733!7.45e-10!12;UBERON:0002028!7.45e-10!12;UBERON:0007277!7.45e-10!12;UBERON:0001872!1.32e-09!5;UBERON:0002021!1.32e-09!5;UBERON:0000475!1.78e-09!365;UBERON:0004732!4.46e-09!13;UBERON:0000483!7.74e-09!309;UBERON:0000119!1.09e-08!312;UBERON:0005383!1.81e-07!3;UBERON:0005382!1.81e-07!3;UBERON:0001894!2.75e-07!7;UBERON:0006222!2.75e-07!7;UBERON:0001896!3.45e-07!3;UBERON:0005290!3.45e-07!3;UBERON:0010096!3.45e-07!3;UBERON:0000062!3.61e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.83e-66;2!UBERON:0010225;2.83e-66;2!UBERON:0002784;8.35e-34;4!UBERON:0001894;7.84e-20;7!UBERON:0002702;8.34e-18;2!UBERON:0001875;8.34e-18;2!UBERON:0006514;8.34e-18;2!UBERON:0002780;2.80e-15;41!UBERON:0001890;2.80e-15;41!UBERON:0001870;2.45e-12;3!UBERON:0000955;1.45e-10;68!UBERON:0000073;2.97e-10;53!UBERON:0002616;2.97e-10;53!UBERON:0002791;1.32e-09;32!UBERON:0001869;1.32e-09;32!UBERON:0001017;2.10e-09;75!UBERON:0001893;2.75e-09;34!UBERON:0001872;6.33e-08;5!UBERON:0001950;2.77e-07;20!UBERON:0003528;3.65e-07;34!UBERON:0002020;3.65e-07;34!UBERON:0000200;8.25e-07;6!UBERON:0002619;9.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,1.45e-66,2;UBERON:0010225,1.45e-66,2;UBERON:0002784,5.98e-34,4;UBERON:0002780,5.03e-20,41;UBERON:0001890,5.03e-20,41;UBERON:0003080,5.03e-20,41;UBERON:0006240,5.03e-20,41;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0001875,9.07e-18,2;UBERON:0006514,9.07e-18,2;UBERON:0002702,1.27e-17,2;UBERON:0000955,2.22e-17,68;UBERON:0006238,2.22e-17,68;UBERON:0000073,1.06e-15,53;UBERON:0002616,1.06e-15,53;UBERON:0001049,6.69e-15,56;UBERON:0005068,6.69e-15,56;UBERON:0006241,6.69e-15,56;UBERON:0007135,6.69e-15,56;UBERON:0001017,9.81e-15,81;UBERON:0003056,9.68e-14,61;UBERON:0001016,2.44e-13,89;UBERON:0001870,3.24e-12,3;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002346,6.36e-10,86;UBERON:0002791,1.05e-09,32;UBERON:0001869,1.05e-09,32;UBERON:0003528,3.43e-09,34;UBERON:0002020,3.43e-09,34;UBERON:0001893,3.43e-09,34;UBERON:0010371,2.74e-08,104;UBERON:0001872,7.01e-08,5;UBERON:0007023,1.08e-07,114;UBERON:0001950,3.14e-07,20;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0000200,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,1.001527445652,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.957803154342908,0.205116364240755,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.2401207790071,0.253663240775627,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,1.65492793379032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,1.001527445652,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.957803154342908,0.205116364240755,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.2401207790071,0.253663240775627,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,1.65492793379032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:681520..681525,- | |short_description=p@chr10:681520..681525,- | ||
}} | }} |
Latest revision as of 14:51, 23 July 2015
Short description: | p@chr10:681520..681525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:681520..681525, - |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data