FFCP PHASE1:Hg19::chr11:131781290..131781355,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000425719,ENST00000479431_5end | |association_with_transcript=0bp_to_ENST00000425719,ENST00000479431_5end | ||
|cluster_id=chr11:131781290..131781355,+ | |||
|coexpression_cluster_id=C2112 | |coexpression_cluster_id=C2112 | ||
|description=CAGE_peak_2_at_NTM_5end | |description=CAGE_peak_2_at_NTM_5end | ||
|id=chr11:131781290..131781355,+ | |id=chr11:131781290..131781355,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.84e-32!180;CL:0000057!1.47e-17!75;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000359!3.64e-15!32;CL:0000183!5.59e-15!59;CL:0000187!8.26e-15!54;CL:0000192!4.87e-14!42;CL:0000514!4.87e-14!42;CL:0000393!3.05e-12!60;CL:0000211!3.05e-12!60;CL:0000220!1.67e-07!246;CL:0002321!1.74e-07!248;CL:0002620!6.48e-07!23;CL:0002539!7.59e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.84e-32!180;CL:0000057!1.47e-17!75;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000359!3.64e-15!32;CL:0000183!5.59e-15!59;CL:0000187!8.26e-15!54;CL:0000192!4.87e-14!42;CL:0000514!4.87e-14!42;CL:0000393!3.05e-12!60;CL:0000211!3.05e-12!60;CL:0000220!1.67e-07!246;CL:0002321!1.74e-07!248;CL:0002620!6.48e-07!23;CL:0002539!7.59e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.06e-17;32!CL:0000192;6.30e-12;43!CL:0002539;6.09e-08;10!CL:0000057;9.00e-08;73!CL:0002620;4.58e-07;23!CL:0000187;5.01e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.39e-18,76;CL:0000359,4.55e-18,32;CL:0000192,1.61e-16,43;CL:0000514,1.61e-16,43;CL:0000680,1.33e-15,58;CL:0000056,1.33e-15,58;CL:0000355,1.33e-15,58;CL:0000187,2.56e-14,55;CL:0000393,1.90e-11,61;CL:0000211,1.90e-11,61;CL:0002539,5.58e-08,10;CL:0002321,2.22e-07,250;CL:0002620,4.60e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;6.30e-12;43!CL:0000355;8.29e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.48e-08!14 | |ontology_enrichment_disease=DOID:2394!3.48e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.26e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.82e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.93e-23!83;UBERON:0002329!3.93e-23!83;UBERON:0003077!3.93e-23!83;UBERON:0003059!3.93e-23!83;UBERON:0007282!3.93e-23!83;UBERON:0009618!3.93e-23!83;UBERON:0007285!3.93e-23!83;UBERON:0000475!8.96e-23!365;UBERON:0000119!4.14e-21!312;UBERON:0000486!2.55e-20!82;UBERON:0000483!4.86e-20!309;UBERON:0004290!3.53e-18!70;UBERON:0000481!3.57e-17!347;UBERON:0001134!1.94e-15!61;UBERON:0002036!1.94e-15!61;UBERON:0003082!1.94e-15!61;UBERON:0002385!2.67e-15!63;UBERON:0001015!2.67e-15!63;UBERON:0000383!2.67e-15!63;UBERON:0005256!2.20e-14!143;UBERON:0000033!5.03e-14!123;UBERON:0000924!6.73e-13!173;UBERON:0006601!6.73e-13!173;UBERON:0000468!7.22e-13!659;UBERON:0000153!7.65e-13!129;UBERON:0007811!7.65e-13!129;UBERON:0004121!2.98e-12!169;UBERON:0004872!3.28e-12!84;UBERON:0000467!6.08e-12!625;UBERON:0001637!7.50e-12!42;UBERON:0003509!7.50e-12!42;UBERON:0004572!7.50e-12!42;UBERON:0000480!9.28e-12!626;UBERON:0000477!9.45e-12!286;UBERON:0003102!2.03e-11!95;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0002049!1.40e-10!79;UBERON:0007798!1.40e-10!79;UBERON:0004111!1.41e-10!241;UBERON:0000025!6.59e-10!194;UBERON:0004573!1.15e-09!33;UBERON:0004571!1.15e-09!33;UBERON:0002050!1.47e-09!605;UBERON:0005423!1.47e-09!605;UBERON:0000923!1.87e-09!604;UBERON:0005291!1.87e-09!604;UBERON:0006598!1.87e-09!604;UBERON:0002532!1.87e-09!604;UBERON:0000922!1.94e-09!612;UBERON:0000479!7.10e-09!787;UBERON:0002097!1.19e-08!40;UBERON:0000055!1.35e-08!69;UBERON:0002346!1.84e-08!90;UBERON:0002199!3.95e-08!45;UBERON:0002416!3.95e-08!45;UBERON:0003075!7.34e-08!86;UBERON:0007284!7.34e-08!86;UBERON:0004535!1.01e-07!110;UBERON:0003914!1.25e-07!118;UBERON:0001009!1.46e-07!113;UBERON:0000490!2.29e-07!138;UBERON:0002100!5.14e-07!216;UBERON:0002616!7.10e-07!59;UBERON:0003129!7.29e-07!11;UBERON:0004237!7.59e-07!10;UBERON:0004695!7.59e-07!10;UBERON:0002111!7.59e-07!10;UBERON:0004178!7.59e-07!10;UBERON:0000955!7.68e-07!69;UBERON:0006238!7.68e-07!69;UBERON:0001135!7.70e-07!15;UBERON:0000064!9.17e-07!219 | |ontology_enrichment_uberon=UBERON:0000914!3.93e-23!83;UBERON:0002329!3.93e-23!83;UBERON:0003077!3.93e-23!83;UBERON:0003059!3.93e-23!83;UBERON:0007282!3.93e-23!83;UBERON:0009618!3.93e-23!83;UBERON:0007285!3.93e-23!83;UBERON:0000475!8.96e-23!365;UBERON:0000119!4.14e-21!312;UBERON:0000486!2.55e-20!82;UBERON:0000483!4.86e-20!309;UBERON:0004290!3.53e-18!70;UBERON:0000481!3.57e-17!347;UBERON:0001134!1.94e-15!61;UBERON:0002036!1.94e-15!61;UBERON:0003082!1.94e-15!61;UBERON:0002385!2.67e-15!63;UBERON:0001015!2.67e-15!63;UBERON:0000383!2.67e-15!63;UBERON:0005256!2.20e-14!143;UBERON:0000033!5.03e-14!123;UBERON:0000924!6.73e-13!173;UBERON:0006601!6.73e-13!173;UBERON:0000468!7.22e-13!659;UBERON:0000153!7.65e-13!129;UBERON:0007811!7.65e-13!129;UBERON:0004121!2.98e-12!169;UBERON:0004872!3.28e-12!84;UBERON:0000467!6.08e-12!625;UBERON:0001637!7.50e-12!42;UBERON:0003509!7.50e-12!42;UBERON:0004572!7.50e-12!42;UBERON:0000480!9.28e-12!626;UBERON:0000477!9.45e-12!286;UBERON:0003102!2.03e-11!95;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0002049!1.40e-10!79;UBERON:0007798!1.40e-10!79;UBERON:0004111!1.41e-10!241;UBERON:0000025!6.59e-10!194;UBERON:0004573!1.15e-09!33;UBERON:0004571!1.15e-09!33;UBERON:0002050!1.47e-09!605;UBERON:0005423!1.47e-09!605;UBERON:0000923!1.87e-09!604;UBERON:0005291!1.87e-09!604;UBERON:0006598!1.87e-09!604;UBERON:0002532!1.87e-09!604;UBERON:0000922!1.94e-09!612;UBERON:0000479!7.10e-09!787;UBERON:0002097!1.19e-08!40;UBERON:0000055!1.35e-08!69;UBERON:0002346!1.84e-08!90;UBERON:0002199!3.95e-08!45;UBERON:0002416!3.95e-08!45;UBERON:0003075!7.34e-08!86;UBERON:0007284!7.34e-08!86;UBERON:0004535!1.01e-07!110;UBERON:0003914!1.25e-07!118;UBERON:0001009!1.46e-07!113;UBERON:0000490!2.29e-07!138;UBERON:0002100!5.14e-07!216;UBERON:0002616!7.10e-07!59;UBERON:0003129!7.29e-07!11;UBERON:0004237!7.59e-07!10;UBERON:0004695!7.59e-07!10;UBERON:0002111!7.59e-07!10;UBERON:0004178!7.59e-07!10;UBERON:0000955!7.68e-07!69;UBERON:0006238!7.68e-07!69;UBERON:0001135!7.70e-07!15;UBERON:0000064!9.17e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.58e-09;33!UBERON:0004571;2.58e-09;33!UBERON:0001637;1.81e-08;42!UBERON:0003509;1.81e-08;42!UBERON:0004572;1.81e-08;42!UBERON:0011137;5.62e-08;11!UBERON:0010323;5.62e-08;11!UBERON:0004237;6.09e-08;10!UBERON:0004695;6.09e-08;10!UBERON:0002111;6.09e-08;10!UBERON:0004178;6.09e-08;10 | |||
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| ||
|short_description=p2@NTM | |short_description=p2@NTM | ||
}} | }} |
Latest revision as of 19:07, 16 September 2015
Short description: | p2@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NTM_5end |
Coexpression cluster: | C2112_Smooth_Amniotic_mesenchymal_Myoblast_Fibroblast_Lens_cerebellum |
Association with transcript: | 0bp_to_ENST00000425719, ENST00000479431_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.39e-18 | 76 |
vascular associated smooth muscle cell | 4.55e-18 | 32 |
smooth muscle cell | 1.61e-16 | 43 |
smooth muscle myoblast | 1.61e-16 | 43 |
muscle precursor cell | 1.33e-15 | 58 |
myoblast | 1.33e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-15 | 58 |
muscle cell | 2.56e-14 | 55 |
electrically responsive cell | 1.90e-11 | 61 |
electrically active cell | 1.90e-11 | 61 |
aortic smooth muscle cell | 5.58e-08 | 10 |
embryonic cell | 2.22e-07 | 250 |
skin fibroblast | 4.60e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.82e-10 | 14 |