FFCP PHASE1:Hg19::chr13:108922469..108922474,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10673 | |EntrezGene=10673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |HGNC=11929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000479435_5end | |association_with_transcript=-100bp_to_ENST00000479435_5end | ||
|cluster_id=chr13:108922469..108922474,+ | |||
|coexpression_cluster_id=C1186 | |coexpression_cluster_id=C1186 | ||
|description=CAGE_peak_10_at_TNFSF13B_5end | |description=CAGE_peak_10_at_TNFSF13B_5end | ||
|id=chr13:108922469..108922474,+ | |id=chr13:108922469..108922474,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.34e-52!112;CL:0000049!3.34e-52!112;CL:0002057!3.72e-47!42;CL:0000860!3.73e-43!45;CL:0000037!1.81e-42!172;CL:0000566!1.81e-42!172;CL:0002032!3.23e-41!165;CL:0000837!3.23e-41!165;CL:0000766!6.29e-41!76;CL:0000988!7.87e-39!182;CL:0002194!4.63e-38!63;CL:0000576!4.63e-38!63;CL:0000040!4.63e-38!63;CL:0000559!4.63e-38!63;CL:0002009!1.80e-36!65;CL:0000557!3.31e-34!71;CL:0000839!6.79e-33!70;CL:0000738!1.12e-32!140;CL:0002087!8.25e-28!119;CL:0002031!1.21e-22!124;CL:0002393!5.55e-10!9;CL:0002397!5.55e-10!9;CL:0000134!1.73e-09!358;CL:0002320!6.23e-09!365;CL:0000094!5.00e-08!8;CL:0000219!2.18e-07!390 | |ontology_enrichment_celltype=CL:0000763!3.34e-52!112;CL:0000049!3.34e-52!112;CL:0002057!3.72e-47!42;CL:0000860!3.73e-43!45;CL:0000037!1.81e-42!172;CL:0000566!1.81e-42!172;CL:0002032!3.23e-41!165;CL:0000837!3.23e-41!165;CL:0000766!6.29e-41!76;CL:0000988!7.87e-39!182;CL:0002194!4.63e-38!63;CL:0000576!4.63e-38!63;CL:0000040!4.63e-38!63;CL:0000559!4.63e-38!63;CL:0002009!1.80e-36!65;CL:0000557!3.31e-34!71;CL:0000839!6.79e-33!70;CL:0000738!1.12e-32!140;CL:0002087!8.25e-28!119;CL:0002031!1.21e-22!124;CL:0002393!5.55e-10!9;CL:0002397!5.55e-10!9;CL:0000134!1.73e-09!358;CL:0002320!6.23e-09!365;CL:0000094!5.00e-08!8;CL:0000219!2.18e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.78e-27;33!CL:0002057;8.78e-27;33!CL:0000473;1.31e-20;39!CL:0000234;1.31e-20;39!CL:0000763;5.27e-17;100!CL:0000576;1.49e-15;48!CL:0000771;5.23e-13;2!CL:0000094;3.47e-12;8!CL:0000766;1.81e-11;69!CL:0000775;5.93e-09;3!CL:0000081;7.04e-09;11!CL:0002032;9.23e-07;1!CL:0000557;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.78e-41,108;CL:0000049,8.78e-41,108;CL:0002032,1.59e-27,161;CL:0000837,1.59e-27,161;CL:0000860,7.66e-27,42;CL:0002057,7.66e-27,42;CL:0000766,7.89e-27,72;CL:0000473,1.50e-26,48;CL:0000234,1.50e-26,48;CL:0000037,3.89e-26,168;CL:0000988,1.65e-24,177;CL:0002194,1.49e-20,59;CL:0000576,1.49e-20,59;CL:0000040,1.49e-20,59;CL:0000559,1.49e-20,59;CL:0000557,3.62e-20,67;CL:0002009,8.86e-20,61;CL:0000839,4.78e-18,66;CL:0000738,9.92e-14,136;CL:0000771,5.24e-13,2;CL:0000094,3.48e-12,8;CL:0002087,2.48e-10,115;CL:0002031,9.27e-10,120;CL:0000134,3.21e-09,354;CL:0000775,5.94e-09,3;CL:0002320,6.38e-09,361;CL:0000081,7.05e-09,11;CL:0000219,7.21e-08,386;CL:0000048,2.48e-07,427;CL:0000723,3.84e-07,433;CL:0000034,6.77e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-20;42!CL:0000049;2.44e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!6.11e-08!31 | |ontology_enrichment_disease=DOID:8692!6.11e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.52e-13;31!DOID:1240;2.44e-08;39!DOID:630;9.23e-07;1!DOID:0050177;9.23e-07;1!DOID:0050427;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.69e-13,31;DOID:1240,4.50e-10,39;DOID:2531,2.33e-07,51;DOID:0060083,2.33e-07,51;DOID:630,8.02e-07,1;DOID:0050177,8.02e-07,1;DOID:0050427,8.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.26e-30!102;UBERON:0003061!5.26e-30!102;UBERON:0002371!8.43e-29!80;UBERON:0002193!1.97e-28!112;UBERON:0001474!7.76e-26!86;UBERON:0004765!5.21e-20!101;UBERON:0001434!5.21e-20!101;UBERON:0002405!7.22e-20!115;UBERON:0002204!3.68e-09!167;UBERON:0003081!1.01e-08!216;UBERON:0002384!3.51e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!5.26e-30!102;UBERON:0003061!5.26e-30!102;UBERON:0002371!8.43e-29!80;UBERON:0002193!1.97e-28!112;UBERON:0001474!7.76e-26!86;UBERON:0004765!5.21e-20!101;UBERON:0001434!5.21e-20!101;UBERON:0002405!7.22e-20!115;UBERON:0002204!3.68e-09!167;UBERON:0003081!1.01e-08!216;UBERON:0002384!3.51e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.21e-17,76;UBERON:0002390,3.16e-16,98;UBERON:0003061,3.16e-16,98;UBERON:0001474,7.31e-16,82;UBERON:0002193,2.30e-14,108;UBERON:0004765,3.78e-14,90;UBERON:0002405,1.40e-13,93;UBERON:0001434,2.17e-12,100;UBERON:0002384,1.63e-08,371;UBERON:0002204,5.48e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.393553906568396,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0,0.726991193897824,0.377875943688809,0.727752183563449,0.929716147622738,0,0.929119112685311,2.58923153089935,1.5369642391746,1.18241114944293,0.689491361473237,0,1.35426486594342,0.752969358170419,0.818718450173537,0.449446968890169,0.918251677112708,0,1.27867425159808,2.63881040149373,2.59302754908121,3.40979800426155,0.870627715885752,0,0.622822248995575,2.00998932205395,2.60741459210101,1.3031330682307,3.63239701580021,1.10483290796269,2.53169909952708,0.211255286311942,0.425208599930087,0.419317291016752,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0.829050053357545,0,0,0,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,5.24304916763028,0,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,1.23408681925858,0,1.08006287447623,0,0,0,0,0,0,0,0,1.39705560002972,0,0.635020748171649,0.324621940274555,1.96558024679421,0,1.56679895773023,0,0,0.963528450622197,1.00899853595524,3.40676990152261,1.03051603426729,0,0,0,0.19538809540204,1.67043704337145,1.23087398947712,0,0,8.45922030527097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.531459361253452,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0.129177819672012,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.393553906568396,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0,0.726991193897824,0.377875943688809,0.727752183563449,0.929716147622738,0,0.929119112685311,2.58923153089935,1.5369642391746,1.18241114944293,0.689491361473237,0,1.35426486594342,0.752969358170419,0.818718450173537,0.449446968890169,0.918251677112708,0,1.27867425159808,2.63881040149373,2.59302754908121,3.40979800426155,0.870627715885752,0,0.622822248995575,2.00998932205395,2.60741459210101,1.3031330682307,3.63239701580021,1.10483290796269,2.53169909952708,0.211255286311942,0.425208599930087,0.419317291016752,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0.829050053357545,0,0,0,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,5.24304916763028,0,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,1.23408681925858,0,1.08006287447623,0,0,0,0,0,0,0,0,1.39705560002972,0,0.635020748171649,0.324621940274555,1.96558024679421,0,1.56679895773023,0,0,0.963528450622197,1.00899853595524,3.40676990152261,1.03051603426729,0,0,0,0.19538809540204,1.67043704337145,1.23087398947712,0,0,8.45922030527097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.531459361253452,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0.129177819672012,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | ||
|short_description=p10@TNFSF13B | |short_description=p10@TNFSF13B | ||
}} | }} |
Latest revision as of 11:08, 16 September 2015
Short description: | p10@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | -100bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data