FFCP PHASE1:Hg19::chr18:56247468..56247487,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:56247468..56247487,-
|short_description=p18@ALPK2
|description=CAGE_peak_18_at_ALPK2_5end
|association_with_transcript=-67bp_to_AK125243_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_AK125243_5end | |||
|cluster_id=chr18:56247468..56247487,- | |||
|coexpression_cluster_id=C2468 | |||
|description=CAGE_peak_18_at_ALPK2_5end | |||
|id=chr18:56247468..56247487,- | |||
|ontology_enrichment_celltype=CL:0000128!2.43e-12!7;CL:0000126!2.43e-12!7;CL:0000127!2.43e-12!7;CL:0002453!2.43e-12!7;CL:0002057!6.74e-11!42;CL:0000860!8.11e-10!45;CL:0000243!3.36e-09!15;CL:0000125!3.36e-09!15;CL:0000030!3.36e-09!15;CL:0000339!3.36e-09!15;CL:0000095!5.62e-08!17;CL:0000123!5.62e-08!17;CL:0002605!4.65e-07!3;CL:0002620!9.76e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.22e-19;3!CL:0000860;2.46e-15;33!CL:0002057;2.46e-15;33!CL:0000128;1.85e-14;7!CL:0000126;1.85e-14;7!CL:0000127;1.85e-14;7!CL:0000243;1.13e-12;15!CL:0000125;1.13e-12;15!CL:0000453;2.74e-12;5!CL:0000095;2.79e-11;17!CL:0000473;2.91e-09;39!CL:0000234;2.91e-09;39!CL:0000576;1.61e-08;48!CL:0002319;9.08e-08;25!CL:0000990;5.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.23e-19,3;CL:0000128,1.92e-14,7;CL:0000126,1.92e-14,7;CL:0000127,1.92e-14,7;CL:0002453,1.92e-14,7;CL:0000243,1.08e-12,15;CL:0000125,1.08e-12,15;CL:0000030,1.08e-12,15;CL:0000339,1.08e-12,15;CL:0000860,1.76e-12,42;CL:0002057,1.76e-12,42;CL:0000453,2.75e-12,5;CL:0000095,2.69e-11,17;CL:0000123,2.69e-11,17;CL:0000473,1.04e-10,48;CL:0000234,1.04e-10,48;CL:0002194,3.15e-08,59;CL:0000576,3.15e-08,59;CL:0000040,3.15e-08,59;CL:0000559,3.15e-08,59;CL:0002009,6.57e-08,61;CL:0002319,8.87e-08,25;CL:0000839,3.40e-07,66;CL:0000557,4.59e-07,67;CL:0000990,5.15e-07,8;CL:0000763,6.91e-07,108;CL:0000049,6.91e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000339;1.13e-12;15!CL:0002057;3.70e-08;42!UBERON:0000358;1.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p18@ALPK2 | |||
}} | }} |
Latest revision as of 00:11, 20 September 2015
Short description: | p18@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -67bp_to_AK125243_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.23e-19 | 3 |
oligodendrocyte | 1.92e-14 | 7 |
macroglial cell | 1.92e-14 | 7 |
astrocyte | 1.92e-14 | 7 |
oligodendrocyte precursor cell | 1.92e-14 | 7 |
glial cell (sensu Vertebrata) | 1.08e-12 | 15 |
glial cell | 1.08e-12 | 15 |
glioblast | 1.08e-12 | 15 |
glioblast (sensu Vertebrata) | 1.08e-12 | 15 |
classical monocyte | 1.76e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-12 | 42 |
Langerhans cell | 2.75e-12 | 5 |
neuron associated cell | 2.69e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 2.69e-11 | 17 |
defensive cell | 1.04e-10 | 48 |
phagocyte | 1.04e-10 | 48 |
monopoietic cell | 3.15e-08 | 59 |
monocyte | 3.15e-08 | 59 |
monoblast | 3.15e-08 | 59 |
promonocyte | 3.15e-08 | 59 |
macrophage dendritic cell progenitor | 6.57e-08 | 61 |
neural cell | 8.87e-08 | 25 |
myeloid lineage restricted progenitor cell | 3.40e-07 | 66 |
granulocyte monocyte progenitor cell | 4.59e-07 | 67 |
conventional dendritic cell | 5.15e-07 | 8 |
myeloid cell | 6.91e-07 | 108 |
common myeloid progenitor | 6.91e-07 | 108 |