FFCP PHASE1:Hg19::chr2:29149934..29149959,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26796 | |EntrezGene=26796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10203 | |HGNC=10203 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_NR_002741,uc002rmq.1_5end | |association_with_transcript=1bp_to_NR_002741,uc002rmq.1_5end | ||
|cluster_id=chr2:29149934..29149959,+ | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_1_at_SNORD53_5end | |description=CAGE_peak_1_at_SNORD53_5end | ||
|id=chr2:29149934..29149959,+ | |id=chr2:29149934..29149959,+ | ||
|ontology_enrichment_celltype=CL:0002621!1.08e-09!3 | |ontology_enrichment_celltype=CL:0002621!1.08e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002166;4.27e-34;3!CL:0002521;5.96e-34;3!CL:0000136;5.70e-09;13!CL:0002159;1.86e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,4.27e-34,3;CL:0002521,5.96e-34,3;CL:0002159,1.86e-08,14;CL:0000136,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.08e-09!3 | |ontology_enrichment_uberon=UBERON:0001949!1.08e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.96e-34;3!UBERON:0001708;5.56e-26;4!UBERON:0008895;5.56e-26;4!UBERON:0011159;4.21e-21;5!UBERON:0002072;5.15e-21;5!UBERON:0011137;2.16e-10;11!UBERON:0010323;2.16e-10;11!UBERON:0001013;2.00e-08;14!UBERON:0000075;1.45e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,5.96e-34,3;UBERON:0001708,5.56e-26,4;UBERON:0008895,5.56e-26,4;UBERON:0011159,4.21e-21,5;UBERON:0002072,5.15e-21,5;UBERON:0010188,7.67e-18,6;UBERON:0002539,7.67e-18,6;UBERON:0008816,7.67e-18,6;UBERON:0010323,2.16e-10,11;UBERON:0011137,1.86e-08,14;UBERON:0001013,2.00e-08,14;UBERON:0000075,1.45e-07,16;UBERON:0008814,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71139235876122,0.850650583454319,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71139235876122,0.850650583454319,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p1@SNORD53 | |short_description=p1@SNORD53 | ||
}} | }} |
Latest revision as of 20:06, 16 September 2015
Short description: | p1@SNORD53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD53_5end |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | 1bp_to_NR_002741, uc002rmq.1_5end |
EntrezGene: | SNORD53 |
HGNC: | 10203 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 4.27e-34 | 3 |
subcutaneous fat cell | 5.96e-34 | 3 |
general ecto-epithelial cell | 1.86e-08 | 14 |
fat cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 5.96e-34 | 3 |
jaw skeleton | 5.56e-26 | 4 |
splanchnocranium | 5.56e-26 | 4 |
primary subdivision of cranial skeletal system | 4.21e-21 | 5 |
hypodermis | 5.15e-21 | 5 |
protuberance | 7.67e-18 | 6 |
pharyngeal arch | 7.67e-18 | 6 |
embryonic head | 7.67e-18 | 6 |
cranial skeletal system | 2.16e-10 | 11 |
axial skeletal system | 1.86e-08 | 14 |
adipose tissue | 2.00e-08 | 14 |
subdivision of skeletal system | 1.45e-07 | 16 |
pharyngeal arch system | 7.18e-07 | 18 |