FFCP PHASE1:Hg19::chr3:170469063..170469069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170469063..170469069,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr3:170469063..170469069,+ | |description=CAGE_peak_at_chr3:170469063..170469069,+ | ||
|id=chr3:170469063..170469069,+ | |id=chr3:170469063..170469069,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.46e-22!119;CL:0000055!1.47e-18!180;CL:0000680!4.66e-15!57;CL:0000056!4.66e-15!57;CL:0000355!4.66e-15!57;CL:0000220!5.53e-13!246;CL:0002321!9.03e-13!248;CL:0000187!8.21e-12!54;CL:0000183!1.42e-11!59;CL:0000076!3.63e-10!62;CL:0000393!4.11e-10!60;CL:0000211!4.11e-10!60;CL:0000057!1.62e-09!75;CL:0000213!4.79e-09!57;CL:0000215!4.79e-09!57;CL:0000077!5.46e-09!19;CL:0000188!2.12e-08!9;CL:0000144!5.72e-08!625;CL:0000192!1.26e-07!42;CL:0000514!1.26e-07!42;CL:0000594!1.40e-07!3;CL:0000071!2.94e-07!18;CL:0002546!2.94e-07!18 | |ontology_enrichment_celltype=CL:0000222!7.46e-22!119;CL:0000055!1.47e-18!180;CL:0000680!4.66e-15!57;CL:0000056!4.66e-15!57;CL:0000355!4.66e-15!57;CL:0000220!5.53e-13!246;CL:0002321!9.03e-13!248;CL:0000187!8.21e-12!54;CL:0000183!1.42e-11!59;CL:0000076!3.63e-10!62;CL:0000393!4.11e-10!60;CL:0000211!4.11e-10!60;CL:0000057!1.62e-09!75;CL:0000213!4.79e-09!57;CL:0000215!4.79e-09!57;CL:0000077!5.46e-09!19;CL:0000188!2.12e-08!9;CL:0000144!5.72e-08!625;CL:0000192!1.26e-07!42;CL:0000514!1.26e-07!42;CL:0000594!1.40e-07!3;CL:0000071!2.94e-07!18;CL:0002546!2.94e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.48e-16;3!CL:1000428;1.48e-16;3!CL:0000077;2.52e-15;19!CL:0002591;4.76e-13;1!CL:0002559;2.58e-10;5!CL:0002543;9.62e-09;6!CL:0000076;2.38e-08;63!CL:0002554;2.28e-07;2!CL:0000317;3.69e-07;2!CL:1000448;3.69e-07;2!CL:0002308;3.69e-07;2!CL:0002140;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.00e-16,3;CL:1000428,1.00e-16,3;CL:0000077,2.24e-15,19;CL:0000076,6.01e-14,63;CL:0002591,7.68e-13,1;CL:0000213,4.58e-12,58;CL:0000215,4.58e-12,58;CL:0002559,2.04e-10,5;CL:0002543,1.04e-08,6;CL:0000222,2.14e-08,121;CL:0002554,2.28e-07,2;CL:0002321,3.26e-07,250;CL:0000317,4.42e-07,2;CL:1000448,4.42e-07,2;CL:0002308,4.42e-07,2;CL:0002140,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.82e-18!70;UBERON:0000914!5.35e-18!83;UBERON:0002329!5.35e-18!83;UBERON:0003077!5.35e-18!83;UBERON:0003059!5.35e-18!83;UBERON:0007282!5.35e-18!83;UBERON:0009618!5.35e-18!83;UBERON:0007285!5.35e-18!83;UBERON:0000486!1.58e-15!82;UBERON:0001134!1.17e-13!61;UBERON:0002036!1.17e-13!61;UBERON:0003082!1.17e-13!61;UBERON:0002385!4.99e-13!63;UBERON:0001015!4.99e-13!63;UBERON:0000383!4.99e-13!63;UBERON:0000490!9.17e-11!138;UBERON:0001637!1.52e-10!42;UBERON:0003509!1.52e-10!42;UBERON:0004572!1.52e-10!42;UBERON:0005256!5.71e-10!143;UBERON:0000055!1.46e-09!69;UBERON:0002049!1.54e-09!79;UBERON:0007798!1.54e-09!79;UBERON:0001981!2.47e-09!60;UBERON:0007500!2.47e-09!60;UBERON:0004537!2.47e-09!60;UBERON:0006965!2.47e-09!60;UBERON:0000119!5.08e-09!312;UBERON:0002097!7.06e-09!40;UBERON:0000483!1.07e-08!309;UBERON:0003102!4.86e-08!95;UBERON:0002199!1.66e-07!45;UBERON:0002416!1.66e-07!45;UBERON:0001986!2.94e-07!18;UBERON:0004638!2.94e-07!18;UBERON:0004852!2.94e-07!18;UBERON:0004872!7.10e-07!84 | |ontology_enrichment_uberon=UBERON:0004290!4.82e-18!70;UBERON:0000914!5.35e-18!83;UBERON:0002329!5.35e-18!83;UBERON:0003077!5.35e-18!83;UBERON:0003059!5.35e-18!83;UBERON:0007282!5.35e-18!83;UBERON:0009618!5.35e-18!83;UBERON:0007285!5.35e-18!83;UBERON:0000486!1.58e-15!82;UBERON:0001134!1.17e-13!61;UBERON:0002036!1.17e-13!61;UBERON:0003082!1.17e-13!61;UBERON:0002385!4.99e-13!63;UBERON:0001015!4.99e-13!63;UBERON:0000383!4.99e-13!63;UBERON:0000490!9.17e-11!138;UBERON:0001637!1.52e-10!42;UBERON:0003509!1.52e-10!42;UBERON:0004572!1.52e-10!42;UBERON:0005256!5.71e-10!143;UBERON:0000055!1.46e-09!69;UBERON:0002049!1.54e-09!79;UBERON:0007798!1.54e-09!79;UBERON:0001981!2.47e-09!60;UBERON:0007500!2.47e-09!60;UBERON:0004537!2.47e-09!60;UBERON:0006965!2.47e-09!60;UBERON:0000119!5.08e-09!312;UBERON:0002097!7.06e-09!40;UBERON:0000483!1.07e-08!309;UBERON:0003102!4.86e-08!95;UBERON:0002199!1.66e-07!45;UBERON:0002416!1.66e-07!45;UBERON:0001986!2.94e-07!18;UBERON:0004638!2.94e-07!18;UBERON:0004852!2.94e-07!18;UBERON:0004872!7.10e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.48e-16;3!UBERON:0001992;1.48e-16;3!UBERON:0002073;2.58e-10;5!UBERON:0001003;1.37e-07;15!UBERON:0007376;1.37e-07;15!UBERON:0002419;3.69e-07;2!UBERON:0007771;3.69e-07;2!UBERON:0000078;3.69e-07;2!UBERON:0003297;3.69e-07;2!UBERON:0001821;3.69e-07;2!UBERON:0003487;3.69e-07;2!UBERON:0002012;3.69e-07;2!UBERON:0001820;3.69e-07;2!UBERON:0008886;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.00e-16,3;UBERON:0001992,1.00e-16,3;UBERON:0002073,2.04e-10,5;UBERON:0005086,2.04e-10,5;UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15;UBERON:0002419,4.42e-07,2;UBERON:0007771,4.42e-07,2;UBERON:0003297,4.42e-07,2;UBERON:0001821,4.42e-07,2;UBERON:0003487,4.42e-07,2;UBERON:0001820,4.42e-07,2;UBERON:0005089,4.42e-07,2;UBERON:0005088,4.42e-07,2;UBERON:0000078,4.69e-07,2;UBERON:0007497,4.69e-07,2;UBERON:0003643,4.69e-07,2;UBERON:0003504,4.69e-07,2;UBERON:0003469,4.69e-07,2;UBERON:0003496,4.69e-07,2;UBERON:0002012,4.69e-07,2;UBERON:0008886,4.69e-07,2;UBERON:0007303,4.69e-07,2;UBERON:0002061,4.69e-07,2;UBERON:0005432,4.69e-07,2;UBERON:0004363,4.69e-07,2 | |||
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|short_description=p@chr3:170469063..170469069,+ | |short_description=p@chr3:170469063..170469069,+ | ||
}} | }} |
Latest revision as of 18:12, 29 July 2015
Short description: | p@chr3:170469063..170469069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170469063..170469069, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.00e-16 | 3 |
stem cell of epidermis | 1.00e-16 | 3 |
mesothelial cell | 2.24e-15 | 19 |
squamous epithelial cell | 6.01e-14 | 63 |
smooth muscle cell of the pulmonary artery | 7.68e-13 | 1 |
lining cell | 4.58e-12 | 58 |
barrier cell | 4.58e-12 | 58 |
hair follicle cell | 2.04e-10 | 5 |
vein endothelial cell | 1.04e-08 | 6 |
mesodermal cell | 2.14e-08 | 121 |
fibroblast of lymphatic vessel | 2.28e-07 | 2 |
embryonic cell | 3.26e-07 | 250 |
sebum secreting cell | 4.42e-07 | 2 |
epithelial cell of sweat gland | 4.42e-07 | 2 |
epithelial cell of skin gland | 4.42e-07 | 2 |
acinar cell of sebaceous gland | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.00e-16 | 3 |
papillary layer of dermis | 1.00e-16 | 3 |
hair follicle | 2.04e-10 | 5 |
hair follicle placode | 2.04e-10 | 5 |
skin epidermis | 1.31e-07 | 15 |
outer epithelium | 1.31e-07 | 15 |
enveloping layer of ectoderm | 1.31e-07 | 15 |
skin gland | 4.42e-07 | 2 |
epidermis gland | 4.42e-07 | 2 |
gland of integumental system | 4.42e-07 | 2 |
sebaceous gland | 4.42e-07 | 2 |
skin sebaceous gland | 4.42e-07 | 2 |
sweat gland | 4.42e-07 | 2 |
sweat gland placode | 4.42e-07 | 2 |
sebaceous gland placode | 4.42e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.69e-07 | 2 |
developing epithelial placode | 4.69e-07 | 2 |
respiratory system arterial blood vessel | 4.69e-07 | 2 |
respiratory system blood vessel | 4.69e-07 | 2 |
respiratory system artery | 4.69e-07 | 2 |
head blood vessel | 4.69e-07 | 2 |
pulmonary artery | 4.69e-07 | 2 |
pulmonary vascular system | 4.69e-07 | 2 |
pharyngeal vasculature | 4.69e-07 | 2 |
truncus arteriosus | 4.69e-07 | 2 |
aortic sac | 4.69e-07 | 2 |
pharyngeal arch artery | 4.69e-07 | 2 |