FFCP PHASE1:Hg19::chr5:55069021..55069040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153129 | |EntrezGene=153129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26907 | |HGNC=26907 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504880_5end | |association_with_transcript=0bp_to_ENST00000504880_5end | ||
|cluster_id=chr5:55069021..55069040,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_8_at_SLC38A9_5end | |description=CAGE_peak_8_at_SLC38A9_5end | ||
|id=chr5:55069021..55069040,- | |id=chr5:55069021..55069040,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0003056;1.71e-14;3!UBERON:0006601;4.12e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-75!57;UBERON:0005068!1.28e-75!57;UBERON:0006241!1.28e-75!57;UBERON:0007135!1.28e-75!57;UBERON:0002020!5.58e-66!34;UBERON:0003528!5.58e-66!34;UBERON:0002616!1.33e-62!59;UBERON:0002791!1.69e-61!33;UBERON:0002780!8.28e-60!41;UBERON:0001890!8.28e-60!41;UBERON:0006240!8.28e-60!41;UBERON:0001893!1.28e-59!34;UBERON:0003080!2.62e-58!42;UBERON:0001017!2.83e-58!82;UBERON:0000955!2.01e-56!69;UBERON:0006238!2.01e-56!69;UBERON:0005743!2.33e-55!86;UBERON:0000073!2.17e-53!94;UBERON:0001016!2.17e-53!94;UBERON:0003075!4.38e-52!86;UBERON:0007284!4.38e-52!86;UBERON:0001869!9.22e-51!32;UBERON:0002346!1.53e-49!90;UBERON:0007023!2.81e-47!115;UBERON:0002619!2.13e-44!22;UBERON:0001950!3.45e-42!20;UBERON:0003056!5.36e-39!61;UBERON:0000956!6.08e-39!25;UBERON:0000203!6.08e-39!25;UBERON:0000033!4.13e-32!123;UBERON:0000153!2.25e-30!129;UBERON:0007811!2.25e-30!129;UBERON:0002308!3.02e-30!9;UBERON:0000125!3.02e-30!9;UBERON:0004121!1.51e-29!169;UBERON:0000924!9.76e-29!173;UBERON:0006601!9.76e-29!173;UBERON:0002298!5.76e-25!8;UBERON:0002420!4.18e-22!9;UBERON:0007245!4.18e-22!9;UBERON:0010009!4.18e-22!9;UBERON:0010011!4.18e-22!9;UBERON:0000454!4.18e-22!9;UBERON:0009663!3.93e-20!7;UBERON:0000025!5.65e-20!194;UBERON:0006331!4.88e-18!3;UBERON:0000988!5.47e-18!3;UBERON:0003076!1.29e-17!15;UBERON:0003057!1.29e-17!15;UBERON:0002771!2.39e-17!3;UBERON:0001871!3.81e-17!7;UBERON:0004732!2.77e-15!13;UBERON:0000200!4.70e-15!6;UBERON:0004111!6.26e-15!241;UBERON:0000477!6.85e-14!286;UBERON:0000483!1.90e-13!309;UBERON:0000119!2.94e-13!312;UBERON:0000369!3.94e-13!4;UBERON:0002435!3.94e-13!4;UBERON:0000204!3.94e-13!4;UBERON:0010082!3.94e-13!4;UBERON:0005162!4.66e-13!2;UBERON:0000122!4.66e-13!2;UBERON:0002148!1.18e-12!2;UBERON:0009662!1.18e-12!2;UBERON:0004733!1.37e-11!12;UBERON:0002028!1.37e-11!12;UBERON:0007277!1.37e-11!12;UBERON:0001872!8.29e-11!5;UBERON:0000064!1.14e-10!219;UBERON:0002021!1.41e-10!5;UBERON:0000475!1.75e-10!365;UBERON:0000349!2.03e-10!5;UBERON:0002240!1.49e-08!3;UBERON:0005383!2.01e-08!3;UBERON:0005382!2.01e-08!3;UBERON:0001896!3.37e-08!3;UBERON:0005290!3.37e-08!3;UBERON:0010096!3.37e-08!3;UBERON:0000062!9.19e-08!511;UBERON:0000941!2.22e-07!1;UBERON:0004904!2.22e-07!1;UBERON:0002464!2.22e-07!1;UBERON:0001021!2.22e-07!1;UBERON:0001785!2.22e-07!1;UBERON:0002336!2.36e-07!1;UBERON:0001018!2.36e-07!1;UBERON:0002473!2.36e-07!1;UBERON:0005340!2.36e-07!1;UBERON:0002316!2.36e-07!1;UBERON:0003544!2.36e-07!1;UBERON:0001020!2.36e-07!1;UBERON:0005970!2.36e-07!1;UBERON:0002437!2.36e-07!1;UBERON:0001874!2.99e-07!1;UBERON:0003112!3.78e-07!1;UBERON:0000032!3.78e-07!1;UBERON:0005253!3.78e-07!1;UBERON:0003128!3.78e-07!1;UBERON:0002241!3.78e-07!1;UBERON:0001703!3.78e-07!1;UBERON:0004761!3.78e-07!1;UBERON:0009617!3.78e-07!1;UBERON:0002038!4.25e-07!1;UBERON:0009661!4.25e-07!1;UBERON:0002022!5.69e-07!1;UBERON:0002581!7.57e-07!1;UBERON:0001882!8.02e-07!1;UBERON:0005403!8.02e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.28e-75!57;UBERON:0005068!1.28e-75!57;UBERON:0006241!1.28e-75!57;UBERON:0007135!1.28e-75!57;UBERON:0002020!5.58e-66!34;UBERON:0003528!5.58e-66!34;UBERON:0002616!1.33e-62!59;UBERON:0002791!1.69e-61!33;UBERON:0002780!8.28e-60!41;UBERON:0001890!8.28e-60!41;UBERON:0006240!8.28e-60!41;UBERON:0001893!1.28e-59!34;UBERON:0003080!2.62e-58!42;UBERON:0001017!2.83e-58!82;UBERON:0000955!2.01e-56!69;UBERON:0006238!2.01e-56!69;UBERON:0005743!2.33e-55!86;UBERON:0000073!2.17e-53!94;UBERON:0001016!2.17e-53!94;UBERON:0003075!4.38e-52!86;UBERON:0007284!4.38e-52!86;UBERON:0001869!9.22e-51!32;UBERON:0002346!1.53e-49!90;UBERON:0007023!2.81e-47!115;UBERON:0002619!2.13e-44!22;UBERON:0001950!3.45e-42!20;UBERON:0003056!5.36e-39!61;UBERON:0000956!6.08e-39!25;UBERON:0000203!6.08e-39!25;UBERON:0000033!4.13e-32!123;UBERON:0000153!2.25e-30!129;UBERON:0007811!2.25e-30!129;UBERON:0002308!3.02e-30!9;UBERON:0000125!3.02e-30!9;UBERON:0004121!1.51e-29!169;UBERON:0000924!9.76e-29!173;UBERON:0006601!9.76e-29!173;UBERON:0002298!5.76e-25!8;UBERON:0002420!4.18e-22!9;UBERON:0007245!4.18e-22!9;UBERON:0010009!4.18e-22!9;UBERON:0010011!4.18e-22!9;UBERON:0000454!4.18e-22!9;UBERON:0009663!3.93e-20!7;UBERON:0000025!5.65e-20!194;UBERON:0006331!4.88e-18!3;UBERON:0000988!5.47e-18!3;UBERON:0003076!1.29e-17!15;UBERON:0003057!1.29e-17!15;UBERON:0002771!2.39e-17!3;UBERON:0001871!3.81e-17!7;UBERON:0004732!2.77e-15!13;UBERON:0000200!4.70e-15!6;UBERON:0004111!6.26e-15!241;UBERON:0000477!6.85e-14!286;UBERON:0000483!1.90e-13!309;UBERON:0000119!2.94e-13!312;UBERON:0000369!3.94e-13!4;UBERON:0002435!3.94e-13!4;UBERON:0000204!3.94e-13!4;UBERON:0010082!3.94e-13!4;UBERON:0005162!4.66e-13!2;UBERON:0000122!4.66e-13!2;UBERON:0002148!1.18e-12!2;UBERON:0009662!1.18e-12!2;UBERON:0004733!1.37e-11!12;UBERON:0002028!1.37e-11!12;UBERON:0007277!1.37e-11!12;UBERON:0001872!8.29e-11!5;UBERON:0000064!1.14e-10!219;UBERON:0002021!1.41e-10!5;UBERON:0000475!1.75e-10!365;UBERON:0000349!2.03e-10!5;UBERON:0002240!1.49e-08!3;UBERON:0005383!2.01e-08!3;UBERON:0005382!2.01e-08!3;UBERON:0001896!3.37e-08!3;UBERON:0005290!3.37e-08!3;UBERON:0010096!3.37e-08!3;UBERON:0000062!9.19e-08!511;UBERON:0000941!2.22e-07!1;UBERON:0004904!2.22e-07!1;UBERON:0002464!2.22e-07!1;UBERON:0001021!2.22e-07!1;UBERON:0001785!2.22e-07!1;UBERON:0002336!2.36e-07!1;UBERON:0001018!2.36e-07!1;UBERON:0002473!2.36e-07!1;UBERON:0005340!2.36e-07!1;UBERON:0002316!2.36e-07!1;UBERON:0003544!2.36e-07!1;UBERON:0001020!2.36e-07!1;UBERON:0005970!2.36e-07!1;UBERON:0002437!2.36e-07!1;UBERON:0001874!2.99e-07!1;UBERON:0003112!3.78e-07!1;UBERON:0000032!3.78e-07!1;UBERON:0005253!3.78e-07!1;UBERON:0003128!3.78e-07!1;UBERON:0002241!3.78e-07!1;UBERON:0001703!3.78e-07!1;UBERON:0004761!3.78e-07!1;UBERON:0009617!3.78e-07!1;UBERON:0002038!4.25e-07!1;UBERON:0009661!4.25e-07!1;UBERON:0002022!5.69e-07!1;UBERON:0002581!7.57e-07!1;UBERON:0001882!8.02e-07!1;UBERON:0005403!8.02e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;5.21e-79;2!UBERON:0000122;5.21e-79;2!UBERON:0002336;1.81e-40;1!UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0011215;1.81e-40;1!UBERON:0001018;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0002473;1.81e-40;1!UBERON:0005340;1.81e-40;1!UBERON:0003544;1.81e-40;1!UBERON:0005970;1.81e-40;1!UBERON:0002316;1.81e-40;1!UBERON:0001020;1.81e-40;1!UBERON:0002437;1.81e-40;1!UBERON:0002148;5.15e-21;2!UBERON:0003714;5.15e-21;2!UBERON:0006331;5.15e-21;2!UBERON:0009662;5.15e-21;2!UBERON:0000988;1.71e-14;3!UBERON:0004732;3.43e-13;13!UBERON:0001872;2.53e-09;5!UBERON:0002298;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.34e-79,2;UBERON:0000122,2.34e-79,2;UBERON:0000941,9.91e-41,1;UBERON:0001785,9.91e-41,1;UBERON:0002464,9.91e-41,1;UBERON:0004904,9.91e-41,1;UBERON:0001021,9.91e-41,1;UBERON:0003902,9.91e-41,1;UBERON:0005425,9.91e-41,1;UBERON:0002336,1.48e-40,1;UBERON:0011215,1.48e-40,1;UBERON:0001018,1.48e-40,1;UBERON:0002473,1.48e-40,1;UBERON:0005340,1.48e-40,1;UBERON:0003544,1.48e-40,1;UBERON:0005970,1.48e-40,1;UBERON:0002316,1.48e-40,1;UBERON:0001020,1.48e-40,1;UBERON:0002437,1.48e-40,1;UBERON:0003714,3.81e-21,2;UBERON:0002148,6.96e-21,2;UBERON:0006331,6.96e-21,2;UBERON:0009662,6.96e-21,2;UBERON:0000988,2.09e-14,3;UBERON:0004732,3.43e-13,13;UBERON:0001016,2.13e-11,89;UBERON:0001781,2.80e-11,4;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0001872,2.53e-09,5;UBERON:0007023,2.58e-09,114;UBERON:0003075,2.59e-08,82;UBERON:0007284,2.59e-08,82;UBERON:0001017,2.69e-08,81;UBERON:0002346,5.87e-08,86;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0002298,7.25e-08,6;UBERON:0000073,2.12e-07,53;UBERON:0002616,2.12e-07,53;UBERON:0001049,4.78e-07,56;UBERON:0005068,4.78e-07,56;UBERON:0006241,4.78e-07,56;UBERON:0007135,4.78e-07,56 | |||
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|short_description=p8@SLC38A9 | |short_description=p8@SLC38A9 | ||
}} | }} |
Latest revision as of 04:23, 18 September 2015
Short description: | p8@SLC38A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC38A9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000504880_5end |
EntrezGene: | SLC38A9 |
HGNC: | 26907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data