FFCP PHASE1:Hg19::chr6:119590894..119590904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000406333_5end | |association_with_transcript=-15bp_to_ENST00000406333_5end | ||
|cluster_id=chr6:119590894..119590904,- | |||
|coexpression_cluster_id=C204 | |coexpression_cluster_id=C204 | ||
|description=CAGE_peak_1_at_ENST00000406333_5end | |description=CAGE_peak_1_at_ENST00000406333_5end | ||
|id=chr6:119590894..119590904,- | |id=chr6:119590894..119590904,- | ||
|ontology_enrichment_celltype=CL:0000064!4.08e-07!3;CL:0005012!4.08e-07!3;CL:0000067!4.08e-07!3;CL:0002304!4.08e-07!3;CL:0002150!8.50e-07!3;CL:0000861!8.50e-07!3 | |ontology_enrichment_celltype=CL:0000064!4.08e-07!3;CL:0005012!4.08e-07!3;CL:0000067!4.08e-07!3;CL:0002304!4.08e-07!3;CL:0002150!8.50e-07!3;CL:0000861!8.50e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.34e-66;1!CL:0000135;3.66e-23;3!CL:0000388;3.66e-23;3!CL:0000359;6.09e-10;32!CL:0002539;5.73e-08;10!CL:0000192;2.46e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.66e-66,1;CL:0000135,3.27e-23,3;CL:0000388,3.27e-23,3;CL:0000359,2.22e-09,32;CL:0002539,5.73e-08,10;CL:0000192,2.95e-07,43;CL:0000514,2.95e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000514;2.46e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!4.08e-07!3;UBERON:0001775!4.08e-07!3 | |ontology_enrichment_uberon=UBERON:0001778!4.08e-07!3;UBERON:0001775!4.08e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.96e-34;2!UBERON:0002012;5.96e-34;2!UBERON:0008886;5.96e-34;2!UBERON:0007846;3.66e-23;3!UBERON:0000043;3.66e-23;3!UBERON:0007845;3.66e-23;3!UBERON:0004237;5.73e-08;10!UBERON:0004695;5.73e-08;10!UBERON:0002111;5.73e-08;10!UBERON:0004178;5.73e-08;10!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.05e-34,2;UBERON:0007497,7.05e-34,2;UBERON:0003643,7.05e-34,2;UBERON:0003504,7.05e-34,2;UBERON:0003469,7.05e-34,2;UBERON:0003496,7.05e-34,2;UBERON:0002012,7.05e-34,2;UBERON:0008886,7.05e-34,2;UBERON:0007303,7.05e-34,2;UBERON:0002061,7.05e-34,2;UBERON:0005432,7.05e-34,2;UBERON:0004363,7.05e-34,2;UBERON:0007846,3.27e-23,3;UBERON:0000043,3.27e-23,3;UBERON:0007845,3.27e-23,3;UBERON:0004145,4.09e-23,3;UBERON:0003498,1.83e-14,5;UBERON:0005985,1.83e-14,5;UBERON:0010188,2.74e-12,6;UBERON:0002539,2.74e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0008816,2.74e-12,6;UBERON:0000485,1.21e-08,9;UBERON:0004237,5.73e-08,10;UBERON:0004695,5.73e-08,10;UBERON:0002111,5.73e-08,10;UBERON:0004178,5.73e-08,10;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0001637,2.10e-07,42;UBERON:0003509,2.10e-07,42;UBERON:0004572,2.10e-07,42;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p1@ENST00000406333 | |short_description=p1@ENST00000406333 | ||
}} | }} |
Latest revision as of 18:48, 30 July 2015
Short description: | p1@ENST00000406333 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000406333_5end |
Coexpression cluster: | C204_Smooth_nasal_CD4_CD19_CD8_CD14_CD34 |
Association with transcript: | -15bp_to_ENST00000406333_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
fibrocyte | 3.27e-23 | 3 |
tendon cell | 3.27e-23 | 3 |
vascular associated smooth muscle cell | 2.22e-09 | 32 |
aortic smooth muscle cell | 5.73e-08 | 10 |
smooth muscle cell | 2.95e-07 | 43 |
smooth muscle myoblast | 2.95e-07 | 43 |