FFCP PHASE1:Hg19::chr19:47615498..47615522,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:47615498..47615522,-
|short_description=p1@ZC3H4
|description=CAGE_peak_1_at_ZC3H4_5end
|association_with_transcript=-12bp_to_uc002pgb.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23211 | |EntrezGene=23211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17808 | |HGNC=17808 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_uc002pgb.1_5end | |||
|cluster_id=chr19:47615498..47615522,- | |||
|description=CAGE_peak_1_at_ZC3H4_5end | |||
|id=chr19:47615498..47615522,- | |||
|ontology_enrichment_celltype=CL:0000763!4.90e-15!112;CL:0000049!4.90e-15!112;CL:0002032!1.53e-11!165;CL:0000837!1.53e-11!165;CL:0000988!1.54e-11!182;CL:0000037!1.46e-10!172;CL:0000566!1.46e-10!172;CL:0000115!1.43e-09!35;CL:0002057!1.81e-08!42;CL:0002371!1.10e-07!591;CL:0000144!1.59e-07!625;CL:0000766!1.67e-07!76;CL:0000860!2.84e-07!45;CL:0000071!3.26e-07!18;CL:0002546!3.26e-07!18;CL:0002078!6.22e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-11;33!CL:0002057;1.06e-11;33!CL:0000115;1.96e-08;36!CL:0000763;1.16e-07;100!CL:0000473;3.41e-07;39!CL:0000234;3.41e-07;39!CL:0000071;3.92e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.99e-17,108;CL:0000049,8.99e-17,108;CL:0002032,1.09e-12,161;CL:0000837,1.09e-12,161;CL:0000988,2.79e-12,177;CL:0000037,1.27e-11,168;CL:0000115,4.79e-10,36;CL:0000766,7.01e-09,72;CL:0000860,1.81e-08,42;CL:0002057,1.81e-08,42;CL:0000839,1.23e-07,66;CL:0002078,2.47e-07,45;CL:0000071,3.26e-07,18;CL:0002546,3.26e-07,18;CL:0000557,3.45e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002546;3.92e-07;18!CL:0002057;9.04e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!5.12e-09!31;DOID:1240!1.06e-08!39;DOID:2531!1.95e-07!51;DOID:0060083!1.95e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.68e-09;31!DOID:1240;4.96e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.12e-09,31;DOID:1240,1.06e-08,39;DOID:2531,1.95e-07,51;DOID:0060083,1.95e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.62e-08!216;UBERON:0002193!1.83e-08!112;UBERON:0002390!6.85e-08!102;UBERON:0003061!6.85e-08!102;UBERON:0001986!3.26e-07!18;UBERON:0004638!3.26e-07!18;UBERON:0004852!3.26e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.92e-07;18!UBERON:0001986;3.92e-07;18!UBERON:0004852;3.92e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.22e-09,108;UBERON:0003081,4.04e-09,203;UBERON:0002390,4.48e-09,98;UBERON:0003061,4.48e-09,98;UBERON:0002405,4.93e-08,93;UBERON:0001474,2.20e-07,82;UBERON:0002371,3.09e-07,76;UBERON:0004638,3.26e-07,18;UBERON:0001986,3.26e-07,18;UBERON:0004852,3.26e-07,18 | |||
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| ||
|short_description=p1@ZC3H4 | |||
}} | }} |
Latest revision as of 22:34, 18 September 2015
Short description: | p1@ZC3H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZC3H4_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_uc002pgb.1_5end |
EntrezGene: | ZC3H4 |
HGNC: | 17808 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.99e-17 | 108 |
common myeloid progenitor | 8.99e-17 | 108 |
hematopoietic oligopotent progenitor cell | 1.09e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-12 | 161 |
hematopoietic cell | 2.79e-12 | 177 |
hematopoietic stem cell | 1.27e-11 | 168 |
endothelial cell | 4.79e-10 | 36 |
myeloid leukocyte | 7.01e-09 | 72 |
classical monocyte | 1.81e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-08 | 42 |
myeloid lineage restricted progenitor cell | 1.23e-07 | 66 |
meso-epithelial cell | 2.47e-07 | 45 |
blood vessel endothelial cell | 3.26e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.26e-07 | 18 |
granulocyte monocyte progenitor cell | 3.45e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.22e-09 | 108 |
lateral plate mesoderm | 4.04e-09 | 203 |
hematopoietic system | 4.48e-09 | 98 |
blood island | 4.48e-09 | 98 |
immune system | 4.93e-08 | 93 |
bone element | 2.20e-07 | 82 |
bone marrow | 3.09e-07 | 76 |
blood vessel endothelium | 3.26e-07 | 18 |
endothelium | 3.26e-07 | 18 |
cardiovascular system endothelium | 3.26e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.12e-09 | 31 |
leukemia | 1.06e-08 | 39 |
hematologic cancer | 1.95e-07 | 51 |
immune system cancer | 1.95e-07 | 51 |