FF:384-1E2: Difference between revisions

Latest revision as of 19:14, 4 June 2020

Name:	forelimb, embryo E13
Species:	Mouse (Mus musculus)
Library ID:	CNhs10589
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	forelimb
dev stage	13 days embryo
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005279

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10589		CAGE		DRX008965		DRR009839

Accession ID Mm9

Library id		BAM		CTSS
CNhs10589		DRZ001264		DRZ002647

Accession ID Mm10

Library id		BAM		CTSS
CNhs10589		DRZ012614		DRZ013997

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs10589

0	0
1	0
10	0
100	0
1000	0
1001	-0.0234
1002	0.0584
1003	0.208
1004	0
1005	-0.0389
1006	-0.0825
1007	0.114
1008	0
1009	-0.006
101	0.103
1010	0
1011	0.0498
1012	0
1013	-0.188
1014	0.218
1015	0.253
1016	0.46
1017	0
1018	0.231
1019	0
102	0
1020	0
1021	0
1022	0
1023	0
1024	0
1025	0
1026	0.102
1027	0.07
1028	0
1029	0.173
103	0.131
1030	0
1031	0.231
1032	-0.184
1033	0.11
1034	0
1035	0
1036	0.177
1037	0
1038	0.044
1039	-0.194
104	0
1040	0.153
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10589

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	3.08786e-4
MA0003.1	MA0003.1	0.134
MA0004.1	MA0004.1	0.969
MA0006.1	MA0006.1	0.386
MA0007.1	MA0007.1	0.244
MA0009.1	MA0009.1	0.281
MA0014.1	MA0014.1	0.0905
MA0017.1	MA0017.1	6.1793e-7
MA0018.2	MA0018.2	0.557
MA0019.1	MA0019.1	0.663
MA0024.1	MA0024.1	8.35905e-4
MA0025.1	MA0025.1	0.104
MA0027.1	MA0027.1	0.0991
MA0028.1	MA0028.1	0.575
MA0029.1	MA0029.1	0.967
MA0030.1	MA0030.1	0.155
MA0031.1	MA0031.1	0.0607
MA0035.2	MA0035.2	1.51197e-4
MA0038.1	MA0038.1	0.0395
MA0039.2	MA0039.2	0.0449
MA0040.1	MA0040.1	0.116
MA0041.1	MA0041.1	0.404
MA0042.1	MA0042.1	0.31
MA0043.1	MA0043.1	0.0373
MA0046.1	MA0046.1	5.05515e-19
MA0047.2	MA0047.2	0.00352
MA0048.1	MA0048.1	0.365
MA0050.1	MA0050.1	8.43025e-4
MA0051.1	MA0051.1	0.00143
MA0052.1	MA0052.1	0.92
MA0055.1	MA0055.1	0.283
MA0057.1	MA0057.1	0.14
MA0058.1	MA0058.1	0.97
MA0059.1	MA0059.1	0.598
MA0060.1	MA0060.1	1.84008e-11
MA0061.1	MA0061.1	0.156
MA0062.2	MA0062.2	0.97
MA0065.2	MA0065.2	7.0341e-5
MA0066.1	MA0066.1	0.0786
MA0067.1	MA0067.1	0.45
MA0068.1	MA0068.1	0.348
MA0069.1	MA0069.1	0.393
MA0070.1	MA0070.1	0.77
MA0071.1	MA0071.1	0.0304
MA0072.1	MA0072.1	0.0242
MA0073.1	MA0073.1	0.794
MA0074.1	MA0074.1	0.379
MA0076.1	MA0076.1	0.321
MA0077.1	MA0077.1	0.0699
MA0078.1	MA0078.1	0.657
MA0079.2	MA0079.2	0.419
MA0080.2	MA0080.2	5.49812e-9
MA0081.1	MA0081.1	0.453
MA0083.1	MA0083.1	0.629
MA0084.1	MA0084.1	0.363
MA0087.1	MA0087.1	0.972
MA0088.1	MA0088.1	0.378
MA0090.1	MA0090.1	0.793
MA0091.1	MA0091.1	0.358
MA0092.1	MA0092.1	0.577
MA0093.1	MA0093.1	0.955
MA0099.2	MA0099.2	4.92672e-4
MA0100.1	MA0100.1	0.756
MA0101.1	MA0101.1	0.512
MA0102.2	MA0102.2	0.691
MA0103.1	MA0103.1	0.00265
MA0104.2	MA0104.2	0.919
MA0105.1	MA0105.1	0.00896
MA0106.1	MA0106.1	0.359
MA0107.1	MA0107.1	0.306
MA0108.2	MA0108.2	0.646
MA0111.1	MA0111.1	0.21
MA0112.2	MA0112.2	1.66366e-6
MA0113.1	MA0113.1	0.244
MA0114.1	MA0114.1	7.72762e-5
MA0115.1	MA0115.1	0.00981
MA0116.1	MA0116.1	0.00125
MA0117.1	MA0117.1	0.268
MA0119.1	MA0119.1	0.0381
MA0122.1	MA0122.1	0.593
MA0124.1	MA0124.1	0.316
MA0125.1	MA0125.1	0.094
MA0131.1	MA0131.1	0.303
MA0135.1	MA0135.1	0.285
MA0136.1	MA0136.1	5.5606e-5
MA0137.2	MA0137.2	0.375
MA0138.2	MA0138.2	3.79914e-5
MA0139.1	MA0139.1	0.0153
MA0140.1	MA0140.1	8.7027e-4
MA0141.1	MA0141.1	3.66811e-4
MA0142.1	MA0142.1	0.603
MA0143.1	MA0143.1	0.12
MA0144.1	MA0144.1	0.228
MA0145.1	MA0145.1	0.0422
MA0146.1	MA0146.1	0.302
MA0147.1	MA0147.1	0.95
MA0148.1	MA0148.1	8.71767e-5
MA0149.1	MA0149.1	0.00403
MA0150.1	MA0150.1	6.32051e-4
MA0152.1	MA0152.1	0.104
MA0153.1	MA0153.1	2.99867e-17
MA0154.1	MA0154.1	5.04855e-4
MA0155.1	MA0155.1	0.788
MA0156.1	MA0156.1	0.0977
MA0157.1	MA0157.1	0.281
MA0159.1	MA0159.1	0.00151
MA0160.1	MA0160.1	0.00433
MA0162.1	MA0162.1	0.31
MA0163.1	MA0163.1	0.00234
MA0164.1	MA0164.1	0.96
MA0258.1	MA0258.1	3.01546e-4
MA0259.1	MA0259.1	0.699

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10589

Novel motif	Logo	P-value
1	1	0.0587
10	10	0.274
100	100	0.994
101	101	0.622
102	102	0.407
103	103	0.0387
104	104	0.651
105	105	0.393
106	106	0.00826
107	107	0.0852
108	108	0.822
109	109	0.0786
11	11	0.0918
110	110	0.204
111	111	0.0135
112	112	0.0199
113	113	0.679
114	114	0.0114
115	115	0.426
116	116	0.568
117	117	0.21
118	118	0.502
119	119	0.0406
12	12	0.671
120	120	0.42
121	121	0.897
122	122	0.96
123	123	0.104
124	124	0.272
125	125	0.255
126	126	0.349
127	127	0.128
128	128	0.0406
129	129	0.169
13	13	0.336
130	130	0.412
131	131	0.385
132	132	0.57
133	133	0.274
134	134	0.657
135	135	0.614
136	136	0.954
137	137	0.536
138	138	0.826
139	139	0.00656
14	14	0.327
140	140	0.0301
141	141	0.242
142	142	0.488
143	143	0.363
144	144	0.64
145	145	0.205
146	146	0.531
147	147	0.503
148	148	0.224
149	149	0.32
15	15	0.0653
150	150	0.422
151	151	0.0872
152	152	0.157
153	153	0.157
154	154	0.801
155	155	0.488
156	156	0.00194
157	157	0.548
158	158	0.388
159	159	0.598
160	160	0.652
161	161	0.343
162	162	0.935
163	163	0.116
164	164	0.157
165	165	0.138
166	166	0.458
167	167	0.736
168	168	0.569
169	169	0.00461
17	17	0.0579
18	18	0.241
19	19	0.135
2	2	0.944
20	20	0.977
21	21	0.904
22	22	0.312
23	23	0.227
24	24	0.648
25	25	0.371
26	26	0.333
27	27	0.488
28	28	0.344
29	29	0.295
3	3	0.15
30	30	0.969
31	31	0.294
32	32	0.2
33	33	0.596
34	34	0.676
35	35	0.146
36	36	0.0677
37	37	0.0631
38	38	0.375
39	39	0.765
4	4	0.476
40	40	0.213
41	41	0.251
42	42	0.461
43	43	0.121
44	44	0.0166
45	45	0.548
46	46	0.246
47	47	0.114
48	48	0.115
49	49	0.0966
5	5	0.119
50	50	0.844
51	51	0.607
52	52	0.315
53	53	0.68
54	54	0.361
55	55	0.315
56	56	0.334
57	57	0.507
58	58	0.276
59	59	0.0828
6	6	0.515
60	60	0.107
61	61	0.9
62	62	0.0703
63	63	0.192
64	64	0.37
65	65	0.156
66	66	0.623
67	67	0.69
68	68	0.00586
69	69	0.315
7	7	0.269
70	70	6.60004e-4
71	71	0.157
72	72	0.488
73	73	0.134
74	74	0.365
75	75	0.0446
76	76	0.829
77	77	0.126
78	78	0.366
79	79	0.31
8	8	0.07
80	80	0.138
81	81	0.346
82	82	0.0783
83	83	0.143
84	84	0.78
85	85	0.0115
86	86	0.72
87	87	0.292
88	88	0.869
89	89	0.174
9	9	0.626
90	90	0.0616
91	91	0.353
92	92	0.0868
93	93	0.734
94	94	0.661
95	95	0.114
96	96	0.15
97	97	0.733
98	98	0.139
99	99	0.541

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10589

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011331 mouse forelimb- embryo E13 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002102 (forelimb)
0000479 (tissue)
0000026 (appendage)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0004708 (paired limb/fin)
0002101 (limb)
0004710 (pectoral appendage)
0010317 (germ layer / neural crest derived structure)
0010707 (appendage girdle complex)
0000153 (anterior region of body)
0010708 (pectoral complex)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000293 (mouse embryonic day 13 sample)
0011331 (mouse forelimb- embryo E13 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005417 (forelimb bud)
UBERON:0005733 (limb field)
UBERON:0005732 (limb/fin field)
UBERON:0005729 (forelimb/pectoral fin field)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002102,UBERON:0000926,UBERON:0000479,UBERON:0000026,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0001062,UBERON:0005291,UBERON:0003102,UBERON:0004708,UBERON:0002101,UBERON:0004710,UBERON:0001048,UBERON:0006598,UBERON:0004357,UBERON:0009872,UBERON:0004347,UBERON:0005419,UBERON:0005732,UBERON:0002532,UBERON:0000153,UBERON:0003081,UBERON:0006603,UBERON:0005417,UBERON:0005733,UBERON:0005729
+|DRA_sample_Accession=CAGE@SAMD00005279
+|accession_numbers=CAGE;DRX008965;DRR009839;DRZ001264;DRZ002647;DRZ012614;DRZ013997
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002102,UBERON:0000479,UBERON:0000026,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0004708,UBERON:0002101,UBERON:0004710,UBERON:0010317,UBERON:0010707,UBERON:0000153,UBERON:0010708
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000999,FF:0000292,FF:0000004,FF:0000293,FF:0011331
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr12:34642510..34642530,+!p1@Twist1!2.16!432.31!Twist1;;chr1:165243591..165243625,-!p2@Prrx1!2.00!148.50!Prrx1;;chr2:74513125..74513143,+!p1@Hoxd12!1.96!90.44!Hoxd12;;chr1:140739014..140739032,-!p1@Lhx9!1.94!106.98!Lhx9;;chr6:52190467..52190500,-!p1@Hoxa10!1.85!70.03!Hoxa10;;chr8:59799772..59799789,+!p1@Hand2!1.75!153.61!Hand2;;chr3:99057269..99057306,+!p1@Tbx15!1.69!58.24!Tbx15;;chr6:52184901..52184959,-!p2@Hoxa10!1.63!41.35!Hoxa10;;chr12:37835120..37835133,+!p2@Meox2!1.55!48.74!Meox2;;chr5:38215819..38215823,-!p1@Msx1!1.54!85.16!Msx1;;chr6:52210774..52210787,-!p1@Hoxa13!1.49!29.91!Hoxa13;;chr9:87626083..87626108,-!p1@Tbx18!1.48!63.17!Tbx18;;chr1:165243379..165243402,-!p3@Prrx1!1.48!43.28!Prrx1;;chr2:74520048..74520064,+!p1@Hoxd11!1.48!28.86!Hoxd11;;chr3:66785857..66785873,-!p1@Shox2!1.47!28.68!Shox2;;chr6:52195795..52195825,-!p1@Hoxa11!1.47!28.50!Hoxa11;;chr13:53568104..53568156,-!p1@Msx2!1.45!39.76!Msx2;;chr12:3891810..3891829,+!p2@Dnmt3a!1.39!36.25!Dnmt3a;;chr10:119914001..119914078,-!p4@Hmga2!1.39!31.67!Hmga2;;chr12:37835141..37835194,+!p1@Meox2!1.37!68.44!Meox2;;chr13:40829137..40829205,-!p1@Tfap2a!1.34!23.23!Tfap2a;;chr12:28027561..28027591,-!p1@Sox11!1.33!130.03!Sox11;;chr10:119913546..119913583,-!p3@Hmga2!1.33!41.70!Hmga2;;chr6:52176164..52176195,-!p1@Hoxa9!1.33!25.34!Hoxa9;;chr6:52195763..52195792,-!p2@Hoxa11!1.33!20.59!Hoxa11;;chr5:120285144..120285160,+!p1@Tbx5!1.33!20.41!Tbx5;;chr7:53631837..53631850,+!p1@Myod1!1.32!20.06!Myod1;;chr10:119913278..119913298,-!p2@Hmga2!1.31!42.93!Hmga2;;chr15:102087737..102087801,-!p3@Rarg!1.31!31.85!Rarg;;chr17:86087592..86087615,-!p1@Six2!1.31!19.35!Six2;;chr12:74147689..74147711,-!p1@Six1!1.29!40.47!Six1;;chr2:38206580..38206600,+!p2@Lhx2!1.29!22.70!Lhx2;;chr1:165243653..165243664,-!p4@Prrx1!1.27!24.63!Prrx1;;chr2:38206744..38206766,+!p1@Lhx2!1.27!21.11!Lhx2;;chr16:25801993..25802014,+!p1@Trp63!1.27!17.42!Trp63;;chr7:144505957..144505972,-!p2@Ebf3!1.26!21.47!Ebf3;;chr1:136186574..136186592,+!p1@Myog!1.24!16.36!Myog;;chr10:119913310..119913366,-!p1@Hmga2!1.21!118.24!Hmga2;;chr13:15555670..15555771,+!p2@Gli3!1.19!36.77!Gli3;;chr7:144506077..144506128,-!p1@Ebf3!1.19!33.08!Ebf3;;chr19:25746898..25746910,+!p1@Dmrt2!1.19!21.47!Dmrt2;;chr18:7004715..7004731,-!p1@Mkx!1.18!33.43!Mkx;;chr12:37835248..37835260,+!p4@Meox2!1.18!14.25!Meox2;;chr18:80909801..80909819,-!p1@Nfatc1!1.17!80.41!Nfatc1;;chr8:111227354..111227401,+!p@chr8:111227354..111227401,+!1.17!18.65!Zfhx3;;chr6:52190668..52190682,-!p3@Hoxa10!1.14!12.84!Hoxa10;;chr6:52190858..52190873,-!p4@Hoxa10!1.14!12.84!Hoxa10;;chr6:14851440..14851497,+!p2@Foxp2!1.12!29.74!Foxp2;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!1.12!21.29!Zfhx3;;chr1:19199236..19199258,+!p1@Tfap2b!1.12!12.32!Tfap2b;;chr12:57796615..57796687,+!p1@Pax9!1.12!12.14!Pax9;;chr12:9581262..9581282,+!p1@Osr1!1.10!137.95!Osr1;;chr15:76287876..76287894,+!p1@Scx!1.09!61.76!Scx;;chr3:30408674..30408716,-!p2@Mecom!1.09!18.83!Mecom;;chr11:44430877..44430899,+!p6@Ebf1!1.09!14.60!Ebf1;;chr11:94981424..94981439,+!p1@Dlx3!1.09!12.84!Dlx3;;chr3:99057256..99057268,+!p3@Tbx15!1.09!11.44!Tbx15;;chr2:74520343..74520383,+!p4@Hoxd11!1.09!11.26!Hoxd11;;chr1:165243792..165243808,-!p1@Prrx1!1.08!38.89!Prrx1;;chr8:111227518..111227550,+!p@chr8:111227518..111227550,+!1.08!19.35!Zfhx3;;chr4:135129538..135129558,-!p1@Grhl3!1.08!16.72!Grhl3;;chr2:74506264..74506286,+!p1@Hoxd13!1.08!11.08!Hoxd13;;chr9:71743854..71743909,-!p1@Tcf12!1.07!85.69!Tcf12;;chr10:126778916..126778974,-!p1@Gli1!1.07!24.28!Gli1;;chr2:30700788..30700824,+!p2@Prrx2!1.07!16.54!Prrx2;;chr1:165243638..165243649,-!p5@Prrx1!1.07!13.20!Prrx1;;chr12:37835203..37835218,+!p3@Meox2!1.07!13.02!Meox2;;chr15:35225845..35225867,+!p1@Osr2!1.06!26.39!Osr2;;chr12:3891753..3891801,+!p4@Dnmt3a!1.06!17.07!Dnmt3a;;chr7:123182248..123182264,-!p3@Sox6!1.06!12.49!Sox6;;chr6:52163319..52163342,-!p1@Hoxa3!1.05!15.13!Hoxa3;;chr6:6832076..6832092,-!p1@Dlx5!1.05!11.96!Dlx5;;chr5:120285161..120285176,+!p2@Tbx5!1.05!10.21!Tbx5;;chr15:95485240..95485257,-!p1@Dbx2!1.04!10.03!Dbx2;;chr13:15555555..15555574,+!p5@Gli3!1.03!13.02!Gli3;;chr2:74513064..74513089,+!p2@Hoxd12!1.03!9.68!Hoxd12;;chr10:12810631..12810649,+!p1@Plagl1!1.02!250.91!Plagl1;;chr1:93698030..93698064,+!p1@Twist2!1.02!19.18!Twist2;;chr2:30700881..30700916,+!p1@Prrx2!1.02!18.12!Prrx2;;chr13:72101178..72101203,-!p1@Irx1!1.02!14.78!Irx1;;chr15:50721942..50721987,-!p13@Trps1!1.02!11.08!Trps1;;chr2:74529970..74529997,+!p1@Hoxd10!1.02!9.50!Hoxd10;;chr14:67853457..67853482,+!p2@Ebf2!1.01!13.20!Ebf2;;chr2:33496386..33496410,-!p1@Lmx1b!1.01!9.15!Lmx1b;;chr1:19199095..19199114,+!p5@Tfap2b!1.01!9.15!Tfap2b;;chr13:15555496..15555544,+!p1@Gli3!1.00!32.02!Gli3;;chr4:154010409..154010466,-!p2@Prdm16!1.00!21.64!Prdm16;;chr14:56443806..56443848,+!p1@Nfatc4!1.00!18.47!Nfatc4;;chr14:67853425..67853454,+!p1@Ebf2!1.00!12.84!Ebf2;;chr13:15555428..15555440,+!p7@Gli3!1.00!10.38!Gli3;;chr2:65683890..65683907,+!p1@Csrnp3!0.99!17.07!Csrnp3;;chr15:50720601..50720630,-!p2@Trps1!0.98!20.76!Trps1;;chr19:59533221..59533271,+!p1@Emx2!0.98!10.73!Emx2;;chr7:144505980..144506010,-!p3@Ebf3!0.98!10.38!Ebf3;;chrX:55283799..55283813,+!p1@Zic3!0.97!8.27!Zic3;;chr11:44430989..44431015,+!p4@Ebf1!0.96!14.96!Ebf1;;chr11:101755669..101755686,-!p1@Meox1!0.95!14.43!Meox1;;chr19:59533429..59533470,+!p4@Emx2!0.95!7.92!Emx2;;chr3:30408603..30408668,-!p1@Mecom!0.94!18.12!Mecom;;chr11:44431016..44431045,+!p5@Ebf1!0.94!11.08!Ebf1;;chr4:154010918..154010931,-!p1@Prdm16!0.93!22.87!Prdm16;;chr4:13712228..13712267,+!p3@Runx1t1!0.93!13.37!Runx1t1;;chr13:83643159..83643226,+!p3@Mef2c!0.93!7.57!Mef2c;;chr17:48061584..48061601,-!p2@Foxp4!0.92!49.27!Foxp4;;chr3:5218516..5218544,+!p2@Zfhx4!0.92!11.26!Zfhx4;;chr6:144157924..144157955,-!p2@Sox5!0.92!9.33!Sox5;;chr1:120949949..120950000,-!p1@Gli2!0.91!32.38!Gli2;;chr8:94881733..94881790,+!p1@Irx5!0.91!14.25!Irx5;;chr1:93698068..93698085,+!p2@Twist2!0.91!8.45!Twist2;;chr7:123182318..123182332,-!p11@Sox6!0.91!7.21!Sox6;;chr1:19199119..19199134,+!p4@Tfap2b!0.91!7.04!Tfap2b;;chr1:19202352..19202354,+!p2@Tfap2b!0.91!7.04!Tfap2b;;chr2:74499300..74499309,-!p@chr2:74499300..74499309,-!0.91!7.04!Evx2;;chr16:95808192..95808202,-!p2@Erg!0.91!7.04!Erg;;chr17:44951553..44951586,-!p2@Runx2!0.90!7.74!Runx2;;chr6:6831950..6831985,-!p2@Dlx5!0.90!7.74!Dlx5;;chr11:112643496..112643562,+!p1@Sox9!0.89!266.39!Sox9;;chr1:38684260..38684312,-!p2@Aff3!0.89!49.44!Aff3;;chr16:14705961..14705978,+!p2@Snai2!0.89!32.90!Snai2;;chr6:14851287..14851342,+!p1@Foxp2!0.89!23.23!Foxp2;;chr13:15555035..15555073,+!p4@Gli3!0.89!19.00!Gli3;;chr2:30700857..30700873,+!p3@Prrx2!0.89!9.50!Prrx2;;chr10:106923133..106923146,-!p1@Myf5!0.89!6.69!Myf5;;chr13:72101141..72101158,-!p3@Irx1!0.88!8.45!Irx1;;chr13:31898729..31898761,+!p1@Foxc1!0.87!16.36!Foxc1;;chr4:84320893..84320910,-!p1@Bnc2!0.87!14.78!Bnc2;;chr19:59533595..59533628,+!p6@Emx2!0.87!6.33!Emx2;;chr16:14705925..14705951,+!p1@Snai2!0.86!46.45!Snai2;;chr8:90483433..90483457,-!p2@Zfp423!0.86!8.62!Zfp423;;chr14:67853632..67853674,+!p3@Ebf2!0.86!7.74!Ebf2;;chr11:44431687..44431706,+!p2@Ebf1!0.85!30.09!Ebf1;;chrX:45245679..45245702,-!p1@Smarca1!0.85!29.03!Smarca1;;chr3:130813200..130813252,+!p1@Lef1!0.85!28.86!Lef1;;chr3:5218629..5218684,+!p1@Zfhx4!0.85!20.94!Zfhx4;;chr6:14851250..14851277,+!p4@Foxp2!0.85!7.92!Foxp2;;chr9:31720843..31720888,-!p1@Barx2!0.85!6.86!Barx2;;chr2:74517742..74517758,+!p2@Hoxd11!0.85!6.16!Hoxd11;;chr12:34642682..34642753,+!p2@Twist1!0.84!16.36!Twist1;;chr17:44951431..44951445,-!p3@Runx2!0.84!5.98!Runx2;;chr6:52210816..52210831,-!p2@Hoxa13!0.84!5.98!Hoxa13;;chr18:14131126..14131211,-!p1@Zfp521!0.83!131.61!Zfp521;;chr13:72101161..72101177,-!p2@Irx1!0.83!8.09!Irx1;;chr1:93698095..93698113,+!p3@Twist2!0.83!7.04!Twist2;;chr9:87625971..87625992,-!p2@Tbx18!0.83!5.81!Tbx18;;chr13:15555079..15555136,+!p3@Gli3!0.82!19.00!Gli3;;chr2:71384802..71384815,-!p1@Dlx2!0.82!7.04!Dlx2;;chr6:14851403..14851422,+!p8@Foxp2!0.82!5.63!Foxp2;;chr8:111227641..111227672,+!p@chr8:111227641..111227672,+!0.81!15.48!Zfhx3;;chr4:13712168..13712218,+!p4@Runx1t1!0.81!9.50!Runx1t1;;chr2:120365588..120365602,-!p2@Zfp106!0.81!9.50!Zfp106;;chr6:14851344..14851364,+!p6@Foxp2!0.81!6.69!Foxp2;;chr1:19199151..19199170,+!p3@Tfap2b!0.81!5.45!Tfap2b;;chr7:52471143..52471186,+!p1@Tead2!0.80!61.41!Tead2;;chr13:72766279..72766296,+!p2@Irx2!0.80!8.09!Irx2;;chr1:19199079..19199092,+!p7@Tfap2b!0.80!5.28!Tfap2b;;chr4:84321317..84321332,-!p4@Bnc2!0.80!5.28!Bnc2;;chr18:69504195..69504213,+!p4@Tcf4!0.79!25.51!Tcf4;;chr18:14131045..14131062,-!p3@Zfp521!0.79!8.62!Zfp521;;chr13:72766250..72766273,+!p1@Irx2!0.79!8.27!Irx2;;chr8:111227455..111227464,+!p@chr8:111227455..111227464,+!0.79!6.69!Zfhx3;;chr1:14746065..14746079,-!p1@Msc!0.79!6.33!Msc;;chr1:19199221..19199234,+!p6@Tfap2b!0.79!5.10!Tfap2b;;chr6:52195747..52195762,-!p3@Hoxa11!0.79!5.10!Hoxa11;;chr1:120950098..120950132,-!p2@Gli2!0.78!12.32!Gli2;;chr11:121380640..121380655,-!p1@Zfp750!0.78!8.80!Zfp750;;chr4:134708451..134708469,+!p1@Runx3!0.77!8.97!Runx3;;chr4:84321300..84321315,-!p2@Bnc2!0.77!6.16!Bnc2;;chr13:40826150..40826167,-!p3@Tfap2a!0.77!5.45!Tfap2a;;chr14:122874619..122874634,+!p1@Zic2!0.77!4.93!Zic2;;chr17:37139472..37139514,+!p1@Zfp57!0.76!35.54!Zfp57;;chrX:66613481..66613562,+!p1@Aff2!0.76!22.35!Aff2;;chr8:90483459..90483475,-!p1@Zfp423!0.76!14.08!Zfp423;;chr15:102087880..102087927,-!p2@Rarg!0.76!11.79!Rarg;;chr13:53568081..53568094,-!p3@Msx2!0.76!4.75!Msx2;;chr4:84321280..84321298,-!p5@Bnc2!0.76!4.75!Bnc2;;chr2:73110004..73110016,+!p2@Sp9!0.76!4.75!Sp9;;chr1:19199064..19199075,+!p10@Tfap2b!0.76!4.75!Tfap2b;;chr2:167363692..167363710,+!p1@Snai1!0.75!62.29!Snai1;;chr11:44430812..44430838,+!p1@Ebf1!0.75!49.79!Ebf1;;chr12:109242266..109242295,-!p1@Bcl11b!0.75!42.58!Bcl11b;;chr17:44872561..44872615,-!p1@Runx2!0.75!11.26!Runx2;;chr11:23978229..23978268,+!p8@Bcl11a!0.75!5.45!Bcl11a;;chr18:14130594..14130600,-!p7@Zfp521!0.75!4.57!Zfp521;;chr2:74520075..74520087,+!p6@Hoxd11!0.75!4.57!Hoxd11;;chr3:107398056..107398082,+!p1@A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;chr7:134376741..134376831,+!p1@Zfp553!0.25!20.41!Zfp553;;chr10:80893549..80893590,-!p2@Nfic!0.25!17.42!Nfic;;chr4:32325688..32325777,+!p1@Bach2!0.25!13.37!Bach2;;chr2:72817320..72817399,-!p2@Sp3!0.25!13.20!Sp3;;chr4:135841976..135842029,+!p2@Zfp46!0.25!11.44!Zfp46;;chr1:162964925..162964963,-!p1@Zbtb37!0.25!9.85!Zbtb37;;chr6:133985657..133985707,+!p3@Etv6!0.25!8.45!Etv6;;chr7:30568977..30569047,+!p1@Zfp30!0.25!8.27!Zfp30;;chr11:62545367..62545412,-!p1@Zfp287!0.25!5.81!Zfp287;;chr9:20385740..20385777,+!p2@Zfp846!0.25!5.10!Zfp846;;chr17:45570488..45570510,-!p3@Cdc5l!0.25!4.93!Cdc5l;;chr1:64579440..64579451,+!p4@Creb1!0.25!4.75!Creb1;;chr7:4947697..4947718,-!p2@Zfp579!0.25!4.05!Zfp579;;chr9:63869850..63869873,-!p2@Smad6!0.25!4.05!Smad6;;chr18:80348151..80348181,-!p2@Adnp2!0.25!3.34!Adnp2;;chr4:97444537..97444555,+!p8@Nfia!0.25!3.17!Nfia;;chr10:26093876..26093894,-!p2@L3mbtl3!0.25!2.99!L3mbtl3;;chr18:55149986..55150009,-!p7@Zfp608!0.25!2.29!Zfp608;;chr2:165818215..165818226,+!p4@Ncoa3!0.25!2.29!Ncoa3;;chr12:3806962..3806973,+!p6@Dnmt3a!0.25!2.29!Dnmt3a;;chr7:134376558..134376587,+!p2@Zfp553!0.25!1.94!Zfp553;;chr6:128250521..128250543,-!p3@Tead4!0.25!1.76!Tead4;;chr2:168032516..168032525,-!p5@Adnp!0.25!1.76!Adnp;;chr17:32501360..32501371,-!p5@Wiz!0.25!1.58!Wiz;;chr18:55149778..55149798,-!p11@Zfp608!0.25!1.41!Zfp608;;chr11:69393784..69393805,+!p3@Trp53!0.25!1.41!Trp53;;chr7:30088977..30089002,+!p2@Dpf1!0.25!1.41!Dpf1;;chr4:99322820..99322845,+!p1@Foxd3!0.25!1.23!Foxd3;;chr18:69752608..69752625,+!p17@Tcf4!0.25!1.06!Tcf4;;chr8:73905967..73905978,-!p4@Nr2f6!0.25!1.06!Nr2f6;;chr6:15135439..15135452,+!p13@Foxp2!0.25!1.06!Foxp2;;chr5:139060930..139060975,-!p1@Zfp68!0.24!57.01!Zfp68;;chr18:5591866..5591900,+!p1@Zeb1!0.24!37.65!Zeb1;;chr5:107125549..107125605,-!p1@Zfp644!0.24!27.10!Zfp644;;chr1:182499095..182499141,+!p2@Parp1!0.24!26.57!Parp1;;chr6:128312937..128313076,+!p1@Foxm1!0.24!21.11!Foxm1;;chr5:143942400..143942474,-!p1@Rbak!0.24!16.19!Rbak;;chr10:20032304..20032324,+!p2@Bclaf1!0.24!14.43!Bclaf1;;chr10:114821444..114821491,-!p1@Thap2!0.24!11.96!Thap2;;chr2:72818459..72818528,-!p3@Sp3!0.24!10.91!Sp3;;chr4:49534086..49534168,+!p1@Zfp189!0.24!10.73!Zfp189;;chr2:162880327..162880385,+!p2@Mybl2!0.24!9.85!Mybl2;;chr18:75527030..75527055,+!p2@Smad7!0.24!9.15!Smad7;;chr8:107694742..107694823,+!p3@Cbfb!0.24!8.80!Cbfb;;chr18:83084030..83084056,+!p1@Zfp516!0.24!7.39!Zfp516;;chr7:119822957..119822980,+!p2@Tead1!0.24!6.86!Tead1;;chr2:73730619..73730630,-!p4@Atf2,p4@LOC100047997!0.24!5.98!Atf2;;chr17:23004042..23004077,-!p2@Zfp945!0.24!5.28!Zfp945;;chr17:71202822..71202877,-!p3@Tgif1!0.24!3.87!Tgif1;;chr8:81552216..81552249,+!p3@Zfp827!0.24!3.69!Zfp827;;chr10:75495410..75495444,+!p2@Zfp280b!0.24!3.17!Zfp280b;;chr5:110539286..110539317,+!p2@Zfp605!0.24!2.99!Zfp605;;chr7:148008023..148008092,-!p1@Zfp941!0.24!2.99!Zfp941;;chr1:138521574..138521597,+!p3@Zfp281!0.24!2.99!Zfp281;;chr11:23977565..23977612,+!p5@Bcl11a!0.24!2.64!Bcl11a;;chr13:55206625..55206636,+!p2@Zfp346!0.24!2.29!Zfp346;;chr4:87452180..87452196,-!p3@Mllt3!0.24!2.29!Mllt3;;chr4:45024818..45024846,-!p4@Zbtb5!0.24!2.11!Zbtb5;;chr13:37917716..37917742,+!p9@Rreb1!0.24!1.94!Rreb1;;chr2:91864449..91864492,-!p3@Creb3l1!0.24!1.76!Creb3l1;;chr14:65568567..65568588,-!p3@Hmbox1!0.24!1.58!Hmbox1;;chr7:5003102..5003113,+!p4@Zfp580!0.24!1.41!Zfp580;;chr7:17642053..17642066,-!p2@Hif3a!0.24!1.41!Hif3a;;chr4:82151126..82151133,-!p8@Nfib!0.24!1.23!Nfib;;chr4:107107175..107107204,+!p1@Glis1!0.24!1.06!Glis1;;chr2:156666435..156666476,+!p4@Tgif2!0.24!1.06!Tgif2;;chr17:37139519..37139531,+!p5@Zfp57!0.24!1.06!Zfp57;;chr11:69393894..69393921,+!p1@Trp53!0.23!142.17!Trp53;;chr17:57170891..57170961,-!p1@Khsrp!0.23!136.54!Khsrp;;chr17:34729193..34729274,+!p1@Pbx2!0.23!72.84!Pbx2;;chr4:34830168..34830213,-!p1@Zfp292!0.23!58.06!Zfp292;;chr13:56804344..56804473,+!p1@Smad5!0.23!46.45!Smad5;;
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0005417,UBERON:0005733,UBERON:0005732,UBERON:0005729,UBERON:0010316,FF:0000294
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 36: / Line 42: @@
 |has_quality=
 |id=FF:384-1E2
-|is_a=EFO:0002091;;FF:0000004;;FF:0000103;;FF:0011331
+|is_a=EFO:0002091;;FF:0011331
+|is_obsolete=
+|library_id=CNhs10589
+|library_id_phase_based=2:CNhs10589
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;384
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;384
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E13.CNhs10589.384-1E2.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E13.CNhs10589.384-1E2.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E13.CNhs10589.384-1E2.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E13.CNhs10589.384-1E2.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E13.CNhs10589.384-1E2.mm9.nobarcode.rdna.fa.gz
 |name=forelimb, embryo E13
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10589,LSID653,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=0.108192017920465,0,0,0,0,0.050104773116286,0.178006536222205,0,0,0,0,0.5534577247279,0,0,0,0,0,0,0.0822080412384979,0,0.0351946358075573,0,0,0,0,0,0,0,0,0,0,0,-0.0415749163156214,0,0,0,0,0.0130391664536859,0.0628677349753767,0.032323531892538,-0.0521373545469628,0.656827469707167,0.142349933690615,0,0,0,0,0,0,0,0,0,0,0,0,-0.0660055475634404,0,0,0,0,-0.0428469550828748,0,0,0,0,0,0.183000845456384,0.101567914361581,0.154870118077892,0.0904719111820916,0,0.0537319486014505,0.070260075557159,0,0,0,0.0730210577412609,0.0300656106854665,-0.282953719891596,0.0521136954738653,0,0,0,0,0,0,-0.135967417504232,-0.30196907925168,-0.0886204770277973,0,0,0,0,0
 |rna_box=1
 |rna_catalog_number=
@@ Line 54: / Line 73: @@
 |rna_rin=
 |rna_sample_type=
-|rna_tube_id=1E2
+|rna_tube_id=1.00E+02
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 76: / Line 96: @@
 |sample_tissue=forelimb
 |top_motifs=SOX5:2.23859865348;ZNF238:2.0792046378;ZNF143:1.88647857236;NKX2-1,4:1.82442550844;ZNF384:1.68800972908;SOX2:1.64187365465;GFI1:1.62772865202;NFY{A,B,C}:1.58346003237;MYBL2:1.54528768047;NANOG{mouse}:1.46242156829;RREB1:1.40718095793;GFI1B:1.35213460396;PATZ1:1.28774186623;HIF1A:1.27984020411;LEF1_TCF7_TCF7L1,2:1.25873296688;MZF1:1.25226151408;TOPORS:1.22186748374;HMGA1,2:1.17874240049;PAX6:1.13087395312;NRF1:1.11017172887;EP300:1.09032630454;PAX1,9:1.08583374144;NKX2-3_NKX2-5:1.03094607607;GATA4:1.00337899363;FOXP3:0.99268365683;E2F1..5:0.981545820783;CDC5L:0.980807177231;SOX{8,9,10}:0.979355113252;MAZ:0.968765533565;TFDP1:0.962643710259;HIC1:0.950168114894;HBP1_HMGB_SSRP1_UBTF:0.891727330015;GTF2A1,2:0.880976822165;TFAP2{A,C}:0.877909896115;VSX1,2:0.856093453291;HMX1:0.84719925052;ATF6:0.829655830874;IKZF1:0.82777597039;GTF2I:0.803917979409;MED-1{core}:0.79852680655;SOX17:0.796136103918;ATF2:0.785362833213;KLF4:0.781493150077;TGIF1:0.768623799752;TEAD1:0.763575512591;PDX1:0.761029948986;BREu{core}:0.760086497112;CDX1,2,4:0.739600450428;NANOG:0.736996112288;XCPE1{core}:0.726185727131;NFATC1..3:0.714270951461;STAT5{A,B}:0.676669981192;HSF1,2:0.673303147462;TEF:0.665277249774;IKZF2:0.653943010071;NKX3-1:0.578169054488;TAL1_TCF{3,4,12}:0.572044561159;PRDM1:0.570575579312;MTE{core}:0.56597928522;TFCP2:0.536123395919;ELK1,4_GABP{A,B1}:0.533552065355;HES1:0.514760689065;RBPJ:0.513739836922;HOXA9_MEIS1:0.505229978746;STAT1,3:0.493727474402;PITX1..3:0.48204976864;ZFP161:0.476717061529;PRRX1,2:0.474702069437;NHLH1,2:0.471405432333;DBP:0.451774902473;EGR1..3:0.440619987506;EN1,2:0.438233630534;TFAP2B:0.419269705879;POU3F1..4:0.413553104118;FOXP1:0.407013394408;FOXD3:0.372794906916;RXR{A,B,G}:0.355306116492;TFAP4:0.351541405808;PAX5:0.34360633062;GLI1..3:0.31984509281;POU5F1:0.293924289588;POU2F1..3:0.276944786688;UFEwm:0.269501981489;AHR_ARNT_ARNT2:0.250117498703;SP1:0.247196946772;SPZ1:0.242865122049;AIRE:0.236828854069;CUX2:0.235777494377;POU1F1:0.190079704888;TLX1..3_NFIC{dimer}:0.176538280629;ZBTB16:0.173773539063;PAX8:0.17058327319;MEF2{A,B,C,D}:0.158772678967;ESR1:0.149030400449;DMAP1_NCOR{1,2}_SMARC:0.132146221972;YY1:0.123174179959;CRX:0.107880963697;MTF1:0.106759050198;GCM1,2:0.0999212337395;MYB:0.0980108539132;LHX3,4:0.093459258083;GZF1:0.0912766772482;T:0.0805314880939;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0738909423343;BPTF:0.060057422458;ELF1,2,4:0.0250252205129;NKX6-1,2:0.0231538156572;NR6A1:-0.00969882633295;SRF:-0.0291292478453;RFX1:-0.0391357346957;EVI1:-0.0394432882292;TP53:-0.0516668437168;CREB1:-0.0538736183225;RORA:-0.062526409688;MYFfamily:-0.0823810377224;SPIB:-0.0905443063396;RFX2..5_RFXANK_RFXAP:-0.11949973115;MAFB:-0.153427144982;FOSL2:-0.160572914728;FOX{I1,J2}:-0.16622150267;ONECUT1,2:-0.186214234469;HOX{A4,D4}:-0.191107873537;REST:-0.199917635897;TBP:-0.212408075126;PAX4:-0.225855138462;FOXL1:-0.237741112639;ALX4:-0.253181761723;SMAD1..7,9:-0.257917152918;ZIC1..3:-0.261019117688;SPI1:-0.281173439746;ATF4:-0.283367262523;PBX1:-0.290914170381;OCT4_SOX2{dimer}:-0.294239829677;NKX3-2:-0.299708893865;FOXQ1:-0.300549785099;ZNF148:-0.312205635041;ZBTB6:-0.320981464019;FOXA2:-0.323243494445;RUNX1..3:-0.335584752457;TBX4,5:-0.3377569478;ATF5_CREB3:-0.341561495647;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350245160962;HOX{A5,B5}:-0.350840198553;SREBF1,2:-0.351995883312;ADNP_IRX_SIX_ZHX:-0.352467120164;SNAI1..3:-0.371512250842;NFKB1_REL_RELA:-0.389509817196;FOS_FOS{B,L1}_JUN{B,D}:-0.436743799151;JUN:-0.443013399345;ETS1,2:-0.454294016877;HLF:-0.499179322644;ALX1:-0.508011232912;FOXO1,3,4:-0.519254111407;PAX2:-0.547821261074;NFIX:-0.573298810074;bHLH_family:-0.576487339513;RXRA_VDR{dimer}:-0.578639435086;HNF4A_NR2F1,2:-0.588288918676;NKX2-2,8:-0.61543019742;POU6F1:-0.621407989559;HNF1A:-0.640029593926;NR3C1:-0.642136953377;IRF7:-0.648960982148;FOXN1:-0.666531318425;GATA6:-0.774289588208;ARID5B:-0.795877960251;PPARG:-0.807436125738;HAND1,2:-0.809976830661;IRF1,2:-0.818343234209;ZNF423:-0.832072503416;TLX2:-0.851126615556;ZEB1:-0.87730074461;MYOD1:-0.925510923977;NFE2L1:-0.93604475928;AR:-0.944237174576;FOX{D1,D2}:-1.00042815011;BACH2:-1.01961587009;FOX{F1,F2,J1}:-1.02617922218;ESRRA:-1.04594514843;NFIL3:-1.1224770884;FOXM1:-1.17513190569;LMO2:-1.19629826396;NR5A1,2:-1.25513087616;NFE2:-1.35120839363;STAT2,4,6:-1.42958053856;EBF1:-1.47457883645;CEBPA,B_DDIT3:-1.47695642312;NFE2L2:-1.47944387604;NR1H4:-1.61067053368
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:384-1E2;search_select_hide=table117:384-1E2
 }}

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FF:384-1E2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:14, 4 June 2020

CNhs10589

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0