FFCP PHASE1:Hg19::chr2:219824420..219824431,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8941 | |EntrezGene=8941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1776 | |HGNC=1776 | ||
|TSSclassifier=strong | |||
|UniProt=Q13319,Q5XKD4 | |UniProt=Q13319,Q5XKD4 | ||
|association_with_transcript=22bp_to_NM_003936,uc002vjf.2_5end | |association_with_transcript=22bp_to_NM_003936,uc002vjf.2_5end | ||
|cluster_id=chr2:219824420..219824431,+ | |||
|coexpression_cluster_id=C257 | |coexpression_cluster_id=C257 | ||
|description=CAGE_peak_3_at_CDK5R2_5end | |description=CAGE_peak_3_at_CDK5R2_5end | ||
|id=chr2:219824420..219824431,+ | |id=chr2:219824420..219824431,+ | ||
|ontology_enrichment_celltype=CL:0000167;1.85e-07;1!CL:0000164;1.85e-07;1!CL:0000502;1.85e-07;1!CL:0000172;1.85e-07;1!CL:0000173;1.85e-07;1 | |ontology_enrichment_celltype=CL:0000242!8.12e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000167;1.85e-07;1!CL:0000164;1.85e-07;1!CL:0000502;1.85e-07;1!CL:0000172;1.85e-07;1!CL:0000173;1.85e-07;1 | ||
|ontology_enrichment_disease=DOID:4430;1.85e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000167,1.30e-07,1;CL:0000164,1.30e-07,1;CL:0000502,1.30e-07,1;CL:0000172,1.30e-07,1;CL:0000173,1.30e-07,1;CL:0002351,1.30e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0002780;6.86e-47;41!UBERON:0001890;6.86e-47;41!UBERON:0001869;1.51e-41;32!UBERON:0001950;1.48e-40;20!UBERON:0001893;1.56e-40;34!UBERON:0002619;7.76e-37;22!UBERON:0002791;7.74e-36;32!UBERON:0003528;8.87e-33;34!UBERON:0002020;8.87e-33;34!UBERON:0000956;2.51e-32;25!UBERON:0000203;2.51e-32;25!UBERON:0000073;5.30e-29;53!UBERON:0002616;5.30e-29;53!UBERON:0000955;1.34e-26;68!UBERON:0003296;7.06e-26;4!UBERON:0010133;7.06e-26;4!UBERON:0001017;1.39e-22;75!UBERON:0001894;1.52e-22;7!UBERON:0001872;2.46e-20;5!UBERON:0001016;4.15e-18;83!UBERON:0000369;1.27e-14;4!UBERON:0002435;1.27e-14;4!UBERON:0000204;1.27e-14;4!UBERON:0001905;1.94e-14;2!UBERON:0002757;1.94e-14;2!UBERON:0010134;1.94e-14;2!UBERON:0005408;1.94e-14;2!UBERON:0001899;1.94e-14;2!UBERON:0001873;1.44e-13;2!UBERON:0000007;3.07e-13;2!UBERON:0007023;5.45e-12;114!UBERON:0002021;6.90e-12;5!UBERON:0002420;3.08e-11;9!UBERON:0007245;3.08e-11;9!UBERON:0010009;3.08e-11;9!UBERON:0010011;3.08e-11;9!UBERON:0000454;3.08e-11;9!UBERON:0005383;2.43e-09;3!UBERON:0005382;2.43e-09;3!UBERON:0001871;1.25e-08;6!UBERON:0009663;1.43e-08;7!UBERON:0002902;6.16e-08;1!UBERON:0009899;6.16e-08;1!UBERON:0007190;6.16e-08;1!UBERON:0002581;8.55e-08;1!UBERON:0002784;1.22e-07;4!UBERON:0001882;1.85e-07;1!UBERON:0002022;1.85e-07;1!UBERON:0005403;1.85e-07;1!UBERON:0000125;9.16e-07;9!UBERON:0002308;9.16e-07;9 | |ontology_enrichment_development_v019=UBERON:0006601;4.43e-17;82!UBERON:0010122;1.44e-13;2!UBERON:0003056;1.06e-09;3!CL:0002351;1.85e-07;1!UBERON:0006222;1.85e-07;1 | ||
|ontology_enrichment_disease=DOID:169!2.12e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.85e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.30e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;6.86e-47;41!UBERON:0001890;6.86e-47;41!UBERON:0001869;1.51e-41;32!UBERON:0001950;1.48e-40;20!UBERON:0001893;1.56e-40;34!UBERON:0002619;7.76e-37;22!UBERON:0002791;7.74e-36;32!UBERON:0003528;8.87e-33;34!UBERON:0002020;8.87e-33;34!UBERON:0000956;2.51e-32;25!UBERON:0000203;2.51e-32;25!UBERON:0000073;5.30e-29;53!UBERON:0002616;5.30e-29;53!UBERON:0000955;1.34e-26;68!UBERON:0003296;7.06e-26;4!UBERON:0010133;7.06e-26;4!UBERON:0001017;1.39e-22;75!UBERON:0001894;1.52e-22;7!UBERON:0001872;2.46e-20;5!UBERON:0001016;4.15e-18;83!UBERON:0000369;1.27e-14;4!UBERON:0002435;1.27e-14;4!UBERON:0000204;1.27e-14;4!UBERON:0001905;1.94e-14;2!UBERON:0002757;1.94e-14;2!UBERON:0010134;1.94e-14;2!UBERON:0005408;1.94e-14;2!UBERON:0001899;1.94e-14;2!UBERON:0001873;1.44e-13;2!UBERON:0000007;3.07e-13;2!UBERON:0007023;5.45e-12;114!UBERON:0002021;6.90e-12;5!UBERON:0002420;3.08e-11;9!UBERON:0007245;3.08e-11;9!UBERON:0010009;3.08e-11;9!UBERON:0010011;3.08e-11;9!UBERON:0000454;3.08e-11;9!UBERON:0005383;2.43e-09;3!UBERON:0005382;2.43e-09;3!UBERON:0001871;1.25e-08;6!UBERON:0009663;1.43e-08;7!UBERON:0002902;6.16e-08;1!UBERON:0009899;6.16e-08;1!UBERON:0007190;6.16e-08;1!UBERON:0002581;8.55e-08;1!UBERON:0002784;1.22e-07;4!UBERON:0001882;1.85e-07;1!UBERON:0002022;1.85e-07;1!UBERON:0005403;1.85e-07;1!UBERON:0000125;9.16e-07;9!UBERON:0002308;9.16e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.21e-61,41;UBERON:0001890,1.21e-61,41;UBERON:0003080,1.21e-61,41;UBERON:0006240,1.21e-61,41;UBERON:0000073,1.04e-51,53;UBERON:0002616,1.04e-51,53;UBERON:0000955,2.30e-51,68;UBERON:0006238,2.30e-51,68;UBERON:0003056,3.19e-49,61;UBERON:0001049,9.29e-49,56;UBERON:0005068,9.29e-49,56;UBERON:0006241,9.29e-49,56;UBERON:0007135,9.29e-49,56;UBERON:0001017,2.73e-46,81;UBERON:0001869,2.55e-45,32;UBERON:0001893,1.52e-42,34;UBERON:0001016,2.76e-41,89;UBERON:0001950,1.29e-40,20;UBERON:0002791,1.50e-39,32;UBERON:0003075,5.94e-39,82;UBERON:0007284,5.94e-39,82;UBERON:0003528,4.04e-37,34;UBERON:0002020,4.04e-37,34;UBERON:0002346,6.02e-37,86;UBERON:0002619,6.86e-37,22;UBERON:0010371,1.10e-32,104;UBERON:0000956,2.25e-32,25;UBERON:0000203,2.25e-32,25;UBERON:0007023,3.56e-27,114;UBERON:0003296,5.50e-26,4;UBERON:0010133,5.50e-26,4;UBERON:0004121,2.61e-23,171;UBERON:0000924,2.61e-23,171;UBERON:0006601,2.61e-23,171;UBERON:0010314,1.54e-22,132;UBERON:0001894,1.56e-22,7;UBERON:0006222,1.56e-22,7;UBERON:0001872,3.02e-20,5;UBERON:0011216,4.09e-15,223;UBERON:0000369,1.13e-14,4;UBERON:0002435,1.13e-14,4;UBERON:0000204,1.13e-14,4;UBERON:0010082,1.13e-14,4;UBERON:0001905,1.95e-14,2;UBERON:0002757,1.95e-14,2;UBERON:0010134,1.95e-14,2;UBERON:0005408,1.95e-14,2;UBERON:0001899,1.95e-14,2;UBERON:0001873,2.11e-13,2;UBERON:0010122,2.11e-13,2;UBERON:0000007,2.39e-13,2;UBERON:0000025,1.44e-12,192;UBERON:0002021,7.05e-12,5;UBERON:0002420,2.35e-11,9;UBERON:0007245,2.35e-11,9;UBERON:0010009,2.35e-11,9;UBERON:0010011,2.35e-11,9;UBERON:0000454,2.35e-11,9;UBERON:0005383,3.12e-09,3;UBERON:0005382,3.12e-09,3;UBERON:0004111,3.79e-09,240;UBERON:0000483,7.48e-09,306;UBERON:0000119,1.02e-08,309;UBERON:0001871,1.11e-08,6;UBERON:0009663,1.34e-08,7;UBERON:0002902,5.58e-08,1;UBERON:0009899,5.58e-08,1;UBERON:0007190,6.37e-08,1;UBERON:0002581,8.28e-08,1;UBERON:0001882,1.07e-07,1;UBERON:0005403,1.07e-07,1;UBERON:0002022,1.22e-07,1;UBERON:0002784,1.22e-07,4;UBERON:0000125,8.72e-07,9;UBERON:0002308,8.72e-07,9 | |||
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|short_description=p3@CDK5R2 | |short_description=p3@CDK5R2 | ||
}} | }} |
Latest revision as of 18:55, 24 September 2015
Short description: | p3@CDK5R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDK5R2_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 22bp_to_NM_003936, uc002vjf.2_5end |
EntrezGene: | CDK5R2 |
HGNC: | 1776 |
UniProt: | Q13319Q5XKD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.30e-07 | 1 |
enteroendocrine cell | 1.30e-07 | 1 |
type D enteroendocrine cell | 1.30e-07 | 1 |
somatostatin secreting cell | 1.30e-07 | 1 |
pancreatic D cell | 1.30e-07 | 1 |
progenitor cell of endocrine pancreas | 1.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.30e-07 | 1 |