FFCP PHASE1:Hg19::chr3:76360015..76360051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-195bp_to_ENST00000475034_5end | |association_with_transcript=-195bp_to_ENST00000475034_5end | ||
|cluster_id=chr3:76360015..76360051,+ | |||
|coexpression_cluster_id=C4345 | |coexpression_cluster_id=C4345 | ||
|description=CAGE_peak_3_at_ROBO2_5end | |description=CAGE_peak_3_at_ROBO2_5end | ||
|id=chr3:76360015..76360051,+ | |id=chr3:76360015..76360051,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.29e-16;82!UBERON:0006241;6.24e-08;3!UBERON:0003057;6.24e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001869;3.61e-51;32!UBERON:0001893;1.22e-49;34!UBERON:0003528;3.05e-49;34!UBERON:0002020;3.05e-49;34!UBERON:0002791;7.38e-48;32!UBERON:0002619;1.28e-47;22!UBERON:0002780;2.26e-46;41!UBERON:0001890;2.26e-46;41!UBERON:0001950;1.23e-43;20!UBERON:0000956;2.41e-41;25!UBERON:0000203;2.41e-41;25!UBERON:0000073;2.22e-38;53!UBERON:0002616;2.22e-38;53!UBERON:0001017;8.23e-29;75!UBERON:0000955;2.74e-26;68!UBERON:0001016;5.70e-23;83!UBERON:0002420;8.23e-18;9!UBERON:0007245;8.23e-18;9!UBERON:0010009;8.23e-18;9!UBERON:0010011;8.23e-18;9!UBERON:0000454;8.23e-18;9!UBERON:0000125;3.43e-17;9!UBERON:0002308;3.43e-17;9!UBERON:0000200;2.72e-15;6!UBERON:0002298;3.74e-14;6!UBERON:0009663;3.85e-13;7!UBERON:0001872;7.44e-13;5!UBERON:0001871;8.57e-13;6!UBERON:0000349;1.18e-12;5!UBERON:0002021;2.24e-12;5!UBERON:0007023;9.05e-12;114!UBERON:0000369;3.46e-11;4!UBERON:0002435;3.46e-11;4!UBERON:0000204;3.46e-11;4!UBERON:0005383;7.11e-09;3!UBERON:0005382;7.11e-09;3!UBERON:0001894;1.12e-08;7!UBERON:0001870;1.92e-08;3!UBERON:0011216;3.21e-08;132!UBERON:0000988;3.30e-08;3!UBERON:0004732;5.04e-08;13!UBERON:0002240;6.24e-08;3!UBERON:0005174;6.24e-08;3!UBERON:0001137;6.24e-08;3!UBERON:0001896;1.27e-07;3!UBERON:0005290;1.27e-07;3!UBERON:0010314;1.56e-07;132 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.09e-41!57;UBERON:0005068!7.09e-41!57;UBERON:0006241!7.09e-41!57;UBERON:0007135!7.09e-41!57;UBERON:0002780!3.06e-37!41;UBERON:0001890!3.06e-37!41;UBERON:0006240!3.06e-37!41;UBERON:0007023!8.61e-37!115;UBERON:0002616!1.30e-36!59;UBERON:0003080!5.20e-36!42;UBERON:0000955!2.04e-34!69;UBERON:0006238!2.04e-34!69;UBERON:0002346!2.25e-34!90;UBERON:0001017!1.93e-33!82;UBERON:0003075!4.98e-33!86;UBERON:0007284!4.98e-33!86;UBERON:0005743!1.98e-32!86;UBERON:0002020!2.24e-32!34;UBERON:0003528!2.24e-32!34;UBERON:0001893!2.89e-32!34;UBERON:0002791!4.14e-31!33;UBERON:0001869!1.56e-30!32;UBERON:0000073!9.92e-29!94;UBERON:0001016!9.92e-29!94;UBERON:0003056!2.21e-28!61;UBERON:0002619!1.23e-24!22;UBERON:0000033!5.99e-24!123;UBERON:0000153!1.30e-23!129;UBERON:0007811!1.30e-23!129;UBERON:0000924!8.02e-23!173;UBERON:0006601!8.02e-23!173;UBERON:0001950!1.28e-22!20;UBERON:0000956!2.21e-22!25;UBERON:0000203!2.21e-22!25;UBERON:0004121!1.36e-21!169;UBERON:0000475!1.48e-13!365;UBERON:0002420!7.29e-12!9;UBERON:0007245!7.29e-12!9;UBERON:0010009!7.29e-12!9;UBERON:0010011!7.29e-12!9;UBERON:0000454!7.29e-12!9;UBERON:0002308!1.58e-11!9;UBERON:0000125!1.58e-11!9;UBERON:0009663!1.99e-09!7;UBERON:0000064!2.27e-09!219;UBERON:0000200!1.61e-08!6;UBERON:0001871!3.82e-08!7;UBERON:0000025!5.07e-08!194;UBERON:0000483!1.24e-07!309;UBERON:0000477!1.59e-07!286;UBERON:0002298!1.88e-07!8;UBERON:0001872!2.36e-07!5;UBERON:0000119!2.37e-07!312;UBERON:0000349!3.30e-07!5;UBERON:0002021!4.90e-07!5;UBERON:0003076!8.24e-07!15;UBERON:0003057!8.24e-07!15;UBERON:0004111!9.21e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.61e-51;32!UBERON:0001893;1.22e-49;34!UBERON:0003528;3.05e-49;34!UBERON:0002020;3.05e-49;34!UBERON:0002791;7.38e-48;32!UBERON:0002619;1.28e-47;22!UBERON:0002780;2.26e-46;41!UBERON:0001890;2.26e-46;41!UBERON:0001950;1.23e-43;20!UBERON:0000956;2.41e-41;25!UBERON:0000203;2.41e-41;25!UBERON:0000073;2.22e-38;53!UBERON:0002616;2.22e-38;53!UBERON:0001017;8.23e-29;75!UBERON:0000955;2.74e-26;68!UBERON:0001016;5.70e-23;83!UBERON:0002420;8.23e-18;9!UBERON:0007245;8.23e-18;9!UBERON:0010009;8.23e-18;9!UBERON:0010011;8.23e-18;9!UBERON:0000454;8.23e-18;9!UBERON:0000125;3.43e-17;9!UBERON:0002308;3.43e-17;9!UBERON:0000200;2.72e-15;6!UBERON:0002298;3.74e-14;6!UBERON:0009663;3.85e-13;7!UBERON:0001872;7.44e-13;5!UBERON:0001871;8.57e-13;6!UBERON:0000349;1.18e-12;5!UBERON:0002021;2.24e-12;5!UBERON:0007023;9.05e-12;114!UBERON:0000369;3.46e-11;4!UBERON:0002435;3.46e-11;4!UBERON:0000204;3.46e-11;4!UBERON:0005383;7.11e-09;3!UBERON:0005382;7.11e-09;3!UBERON:0001894;1.12e-08;7!UBERON:0001870;1.92e-08;3!UBERON:0011216;3.21e-08;132!UBERON:0000988;3.30e-08;3!UBERON:0004732;5.04e-08;13!UBERON:0002240;6.24e-08;3!UBERON:0005174;6.24e-08;3!UBERON:0001137;6.24e-08;3!UBERON:0001896;1.27e-07;3!UBERON:0005290;1.27e-07;3!UBERON:0010314;1.56e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.90e-74,56;UBERON:0005068,9.90e-74,56;UBERON:0006241,9.90e-74,56;UBERON:0007135,9.90e-74,56;UBERON:0000073,2.12e-67,53;UBERON:0002616,2.12e-67,53;UBERON:0002780,1.97e-64,41;UBERON:0001890,1.97e-64,41;UBERON:0003080,1.97e-64,41;UBERON:0006240,1.97e-64,41;UBERON:0000955,3.03e-60,68;UBERON:0006238,3.03e-60,68;UBERON:0001017,3.13e-59,81;UBERON:0003528,2.22e-57,34;UBERON:0002020,2.22e-57,34;UBERON:0001869,2.32e-57,32;UBERON:0001893,3.59e-57,34;UBERON:0003075,4.05e-56,82;UBERON:0007284,4.05e-56,82;UBERON:0002346,3.24e-55,86;UBERON:0001016,2.48e-54,89;UBERON:0002791,3.77e-53,32;UBERON:0010371,1.14e-52,104;UBERON:0003056,1.94e-50,61;UBERON:0002619,1.46e-47,22;UBERON:0001950,1.44e-43,20;UBERON:0000956,2.70e-41,25;UBERON:0000203,2.70e-41,25;UBERON:0004121,1.55e-35,171;UBERON:0000924,1.55e-35,171;UBERON:0006601,1.55e-35,171;UBERON:0007023,2.38e-35,114;UBERON:0010314,4.69e-33,132;UBERON:0011216,2.86e-20,223;UBERON:0002420,7.89e-18,9;UBERON:0007245,7.89e-18,9;UBERON:0010009,7.89e-18,9;UBERON:0010011,7.89e-18,9;UBERON:0000454,7.89e-18,9;UBERON:0000125,3.09e-17,9;UBERON:0002308,3.09e-17,9;UBERON:0000025,1.25e-15,192;UBERON:0000200,3.19e-15,6;UBERON:0002298,3.70e-14,6;UBERON:0009663,3.86e-13,7;UBERON:0001872,6.13e-13,5;UBERON:0001871,9.62e-13,6;UBERON:0000349,1.18e-12,5;UBERON:0002021,2.55e-12,5;UBERON:0000483,5.59e-12,306;UBERON:0000119,1.00e-11,309;UBERON:0004111,1.77e-11,240;UBERON:0003076,1.77e-11,15;UBERON:0003057,1.77e-11,15;UBERON:0000369,3.50e-11,4;UBERON:0002435,3.50e-11,4;UBERON:0000204,3.50e-11,4;UBERON:0010082,3.50e-11,4;UBERON:0005383,6.68e-09,3;UBERON:0005382,6.68e-09,3;UBERON:0001894,9.73e-09,7;UBERON:0006222,9.73e-09,7;UBERON:0001870,2.07e-08,3;UBERON:0000988,2.85e-08,3;UBERON:0004732,5.02e-08,13;UBERON:0002240,6.32e-08,3;UBERON:0005174,6.32e-08,3;UBERON:0001137,6.32e-08,3;UBERON:0001896,1.44e-07,3;UBERON:0005290,1.44e-07,3;UBERON:0010096,1.44e-07,3 | |||
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|short_description=p3@ROBO2 | |short_description=p3@ROBO2 | ||
}} | }} |
Latest revision as of 15:58, 19 September 2015
Short description: | p3@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ROBO2_5end |
Coexpression cluster: | C4345_caudate_melanoma_merkel_smallcell_occipital_pons_amygdala |
Association with transcript: | -195bp_to_ENST00000475034_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data