FFCP PHASE1:Hg19::chr14:90379404..90379417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:90379404..90379417,+ | |||
|coexpression_cluster_id=C1557 | |coexpression_cluster_id=C1557 | ||
|description=CAGE_peak_at_chr14:90379404..90379417,+ | |description=CAGE_peak_at_chr14:90379404..90379417,+ | ||
|id=chr14:90379404..90379417,+ | |id=chr14:90379404..90379417,+ | ||
|ontology_enrichment_celltype=CL:0001014;2.20e-24;2!CL:0001016;2.20e-24;2!CL:0000097;4.12e-22;5!CL:0000767;1.08e-16;3!CL:0000037;3.76e-13;1!CL:0001024;3.76e-13;1!CL:0000163;1.45e-12;9!CL:0000453;2.41e-10;5!CL:0000840;9.08e-09;5!CL:0000136;1.47e-08;13!CL:0000766;5.28e-08;69!CL:0000094;8.11e-07;8 | |ontology_enrichment_celltype=CL:0002057!1.85e-26!42;CL:0000860!2.43e-24!45;CL:0000766!7.82e-23!76;CL:0000557!1.04e-22!71;CL:0000839!5.59e-19!70;CL:0002009!9.67e-19!65;CL:0000763!3.49e-16!112;CL:0000049!3.49e-16!112;CL:0000738!5.16e-16!140;CL:0002194!1.43e-15!63;CL:0000576!1.43e-15!63;CL:0000040!1.43e-15!63;CL:0000559!1.43e-15!63;CL:0000037!1.24e-12!172;CL:0000566!1.24e-12!172;CL:0002031!1.74e-12!124;CL:0000988!1.69e-11!182;CL:0000767!1.99e-11!3;CL:0002032!1.62e-10!165;CL:0000837!1.62e-10!165;CL:0002087!1.56e-09!119;CL:0002320!5.78e-09!365;CL:0000134!1.05e-08!358;CL:0001014!3.43e-08!2;CL:0001016!3.43e-08!2;CL:0002274!4.04e-07!5;CL:0000457!4.04e-07!5;CL:0002191!4.04e-07!5;CL:0000097!4.04e-07!5;CL:0000831!4.04e-07!5;CL:0002028!4.04e-07!5;CL:0000219!4.71e-07!390 | ||
| | |ontology_enrichment_celltype_v019=CL:0001014;2.20e-24;2!CL:0001016;2.20e-24;2!CL:0000097;4.12e-22;5!CL:0000767;1.08e-16;3!CL:0000037;3.76e-13;1!CL:0001024;3.76e-13;1!CL:0000163;1.45e-12;9!CL:0000453;2.41e-10;5!CL:0000840;9.08e-09;5!CL:0000136;1.47e-08;13!CL:0000766;5.28e-08;69!CL:0000094;8.11e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.34e-24,2;CL:0001016,2.34e-24,2;CL:0000097,4.43e-22,5;CL:0002028,4.43e-22,5;CL:0000767,7.90e-17,3;CL:0001024,3.33e-13,1;CL:0000557,6.56e-13,67;CL:0000163,1.51e-12,9;CL:0000766,5.39e-12,72;CL:0000763,1.32e-11,108;CL:0000049,1.32e-11,108;CL:0000453,2.47e-10,5;CL:0000738,6.28e-09,136;CL:0000840,9.27e-09,5;CL:0001029,9.27e-09,5;CL:0000037,2.10e-08,168;CL:0000839,5.57e-08,66;CL:0000988,6.81e-08,177;CL:0000136,1.80e-07,15;CL:0002032,2.58e-07,161;CL:0000837,2.58e-07,161;CL:0000094,7.22e-07,8;CL:0002031,9.01e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.22e-21!80;UBERON:0001474!1.98e-19!86;UBERON:0002390!3.49e-18!102;UBERON:0003061!3.49e-18!102;UBERON:0002193!6.20e-16!112;UBERON:0004765!1.42e-15!101;UBERON:0001434!1.42e-15!101;UBERON:0002405!4.44e-14!115;UBERON:0002204!1.91e-08!167;UBERON:0002384!1.93e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.56e-14,76;UBERON:0001474,7.03e-13,82;UBERON:0004765,1.23e-11,90;UBERON:0002405,3.19e-11,93;UBERON:0002390,1.37e-10,98;UBERON:0003061,1.37e-10,98;UBERON:0001434,2.35e-10,100;UBERON:0002193,1.69e-09,108 | |||
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| ||
|short_description=p@chr14:90379404..90379417,+ | |short_description=p@chr14:90379404..90379417,+ | ||
}} | }} |
Latest revision as of 23:27, 24 July 2015
Short description: | p@chr14:90379404..90379417, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:90379404..90379417, + |
Coexpression cluster: | C1557_Basophils_Mast_CD34_CD14_CD133_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.34e-24 | 2 |
immature CD1a-positive Langerhans cell | 2.34e-24 | 2 |
mast cell | 4.43e-22 | 5 |
basophil mast progenitor cell | 4.43e-22 | 5 |
basophil | 7.90e-17 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.33e-13 | 1 |
granulocyte monocyte progenitor cell | 6.56e-13 | 67 |
endocrine cell | 1.51e-12 | 9 |
myeloid leukocyte | 5.39e-12 | 72 |
myeloid cell | 1.32e-11 | 108 |
common myeloid progenitor | 1.32e-11 | 108 |
Langerhans cell | 2.47e-10 | 5 |
leukocyte | 6.28e-09 | 136 |
immature conventional dendritic cell | 9.27e-09 | 5 |
common dendritic progenitor | 9.27e-09 | 5 |
hematopoietic stem cell | 2.10e-08 | 168 |
myeloid lineage restricted progenitor cell | 5.57e-08 | 66 |
hematopoietic cell | 6.81e-08 | 177 |
fat cell | 1.80e-07 | 15 |
hematopoietic oligopotent progenitor cell | 2.58e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.58e-07 | 161 |
granulocyte | 7.22e-07 | 8 |
hematopoietic lineage restricted progenitor cell | 9.01e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.56e-14 | 76 |
bone element | 7.03e-13 | 82 |
skeletal element | 1.23e-11 | 90 |
immune system | 3.19e-11 | 93 |
hematopoietic system | 1.37e-10 | 98 |
blood island | 1.37e-10 | 98 |
skeletal system | 2.35e-10 | 100 |
hemolymphoid system | 1.69e-09 | 108 |