FFCP PHASE1:Hg19::chr19:38346040..38346055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:38346040..38346055,+ | |||
|coexpression_cluster_id=C3771 | |coexpression_cluster_id=C3771 | ||
|description=CAGE_peak_at_chr19:38346040..38346055,+ | |description=CAGE_peak_at_chr19:38346040..38346055,+ | ||
|id=chr19:38346040..38346055,+ | |id=chr19:38346040..38346055,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.12e-25!7;CL:0000586!1.12e-25!7 | |ontology_enrichment_celltype=CL:0000039!1.12e-25!7;CL:0000586!1.12e-25!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.21e-64;7!CL:0000586;3.21e-64;7!CL:0002097;2.85e-10;2!CL:0000174;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.31e-64,7;CL:0000586,2.31e-64,7;CL:0002097,2.49e-10,2;CL:0000174,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.40e-29;10!UBERON:0005564;3.40e-29;10 | |||
|ontology_enrichment_disease=DOID:3095!9.86e-08!22;DOID:2994!9.86e-08!22 | |ontology_enrichment_disease=DOID:3095!9.86e-08!22;DOID:2994!9.86e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.22e-20;22!DOID:2994;1.22e-20;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.10e-20,22;DOID:2994,1.10e-20,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.14e-15!8;UBERON:0003135!2.55e-11!11;UBERON:0001049!8.85e-11!57;UBERON:0005068!8.85e-11!57;UBERON:0006241!8.85e-11!57;UBERON:0007135!8.85e-11!57;UBERON:0000956!2.56e-10!25;UBERON:0000203!2.56e-10!25;UBERON:0001869!5.92e-10!32;UBERON:0002791!1.28e-09!33;UBERON:0002020!2.67e-09!34;UBERON:0003528!2.67e-09!34;UBERON:0001893!2.67e-09!34;UBERON:0002619!4.10e-09!22;UBERON:0003075!7.35e-09!86;UBERON:0007284!7.35e-09!86;UBERON:0002616!1.08e-08!59;UBERON:0002346!2.45e-08!90;UBERON:0002369!1.00e-07!3;UBERON:0001235!1.00e-07!3;UBERON:0006858!1.00e-07!3;UBERON:0002780!1.67e-07!41;UBERON:0001890!1.67e-07!41;UBERON:0006240!1.67e-07!41;UBERON:0001950!1.86e-07!20;UBERON:0003080!2.69e-07!42;UBERON:0000955!5.33e-07!69;UBERON:0006238!5.33e-07!69;UBERON:0001896!5.83e-07!3;UBERON:0005290!5.83e-07!3;UBERON:0010096!5.83e-07!3 | |ontology_enrichment_uberon=UBERON:0000473!1.14e-15!8;UBERON:0003135!2.55e-11!11;UBERON:0001049!8.85e-11!57;UBERON:0005068!8.85e-11!57;UBERON:0006241!8.85e-11!57;UBERON:0007135!8.85e-11!57;UBERON:0000956!2.56e-10!25;UBERON:0000203!2.56e-10!25;UBERON:0001869!5.92e-10!32;UBERON:0002791!1.28e-09!33;UBERON:0002020!2.67e-09!34;UBERON:0003528!2.67e-09!34;UBERON:0001893!2.67e-09!34;UBERON:0002619!4.10e-09!22;UBERON:0003075!7.35e-09!86;UBERON:0007284!7.35e-09!86;UBERON:0002616!1.08e-08!59;UBERON:0002346!2.45e-08!90;UBERON:0002369!1.00e-07!3;UBERON:0001235!1.00e-07!3;UBERON:0006858!1.00e-07!3;UBERON:0002780!1.67e-07!41;UBERON:0001890!1.67e-07!41;UBERON:0006240!1.67e-07!41;UBERON:0001950!1.86e-07!20;UBERON:0003080!2.69e-07!42;UBERON:0000955!5.33e-07!69;UBERON:0006238!5.33e-07!69;UBERON:0001896!5.83e-07!3;UBERON:0005290!5.83e-07!3;UBERON:0010096!5.83e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.36e-36;8!UBERON:0003135;1.37e-26;11!UBERON:0000991;3.88e-14;21!UBERON:0003101;1.64e-13;22!UBERON:0000079;1.64e-13;22!UBERON:0002369;2.88e-07;3!UBERON:0001235;2.88e-07;3!UBERON:0006858;2.88e-07;3!UBERON:0002114;2.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.97e-36,8;UBERON:0003135,1.20e-26,11;UBERON:0000991,3.63e-14,21;UBERON:0009196,3.63e-14,21;UBERON:0009117,3.63e-14,21;UBERON:0005564,3.63e-14,21;UBERON:0004176,1.54e-13,22;UBERON:0003101,1.54e-13,22;UBERON:0000079,1.54e-13,22;UBERON:0002369,2.63e-07,3;UBERON:0001235,2.63e-07,3;UBERON:0006858,2.63e-07,3;UBERON:0002114,3.16e-07,2 | |||
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|short_description=p@chr19:38346040..38346055,+ | |short_description=p@chr19:38346040..38346055,+ | ||
}} | }} |
Latest revision as of 07:15, 26 July 2015
Short description: | p@chr19:38346040..38346055, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:38346040..38346055, + |
Coexpression cluster: | C3771_mesothelioma_testicular_adult_neuroblastoma_testis_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.31e-64 | 7 |
germ cell | 2.31e-64 | 7 |
cortical cell of adrenal gland | 2.49e-10 | 2 |
steroid hormone secreting cell | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.97e-36 | 8 |
male reproductive organ | 1.20e-26 | 11 |
gonad | 3.63e-14 | 21 |
indifferent external genitalia | 3.63e-14 | 21 |
indifferent gonad | 3.63e-14 | 21 |
gonad primordium | 3.63e-14 | 21 |
external genitalia | 1.54e-13 | 22 |
male organism | 1.54e-13 | 22 |
male reproductive system | 1.54e-13 | 22 |
adrenal gland | 2.63e-07 | 3 |
adrenal cortex | 2.63e-07 | 3 |
adrenal/interrenal gland | 2.63e-07 | 3 |
duodenum | 3.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.10e-20 | 22 |
germ cell cancer | 1.10e-20 | 22 |