FFCP PHASE1:Hg19::chr1:171493953..171493980,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:171493953..171493980,+
|short_description=p@chr1:171493953..171493980,+
|description=CAGE_peak_at_chr1:171493953..171493980,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:171493953..171493980,+ | |||
|coexpression_cluster_id=C852 | |||
|description=CAGE_peak_at_chr1:171493953..171493980,+ | |||
|id=chr1:171493953..171493980,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.77e-12!119;CL:0002032!1.31e-11!165;CL:0000837!1.31e-11!165;CL:0000037!1.31e-11!172;CL:0000566!1.31e-11!172;CL:0000860!2.72e-11!45;CL:0002057!4.38e-11!42;CL:0000738!3.06e-10!140;CL:0002031!9.84e-10!124;CL:0000988!1.71e-09!182;CL:0002194!2.35e-08!63;CL:0000576!2.35e-08!63;CL:0000040!2.35e-08!63;CL:0000559!2.35e-08!63;CL:0002009!9.95e-08!65;CL:0000763!1.24e-07!112;CL:0000049!1.24e-07!112;CL:0000766!5.47e-07!76;CL:0000839!6.53e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-11;33!CL:0002057;1.55e-11;33!CL:0000473;1.61e-09;39!CL:0000234;1.61e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.21e-12,115;CL:0002032,9.64e-12,161;CL:0000837,9.64e-12,161;CL:0000037,1.22e-11,168;CL:0000860,4.24e-11,42;CL:0002057,4.24e-11,42;CL:0000473,5.50e-11,48;CL:0000234,5.50e-11,48;CL:0000738,7.41e-10,136;CL:0000988,9.23e-10,177;CL:0002031,2.88e-09,120;CL:0002194,1.31e-07,59;CL:0000576,1.31e-07,59;CL:0000040,1.31e-07,59;CL:0000559,1.31e-07,59;CL:0000763,2.85e-07,108;CL:0000049,2.85e-07,108;CL:0002009,3.83e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-08;42 | |||
|ontology_enrichment_disease=DOID:162!2.04e-17!235;DOID:14566!3.27e-17!239;DOID:0050687!2.71e-09!143;DOID:2531!5.61e-07!51;DOID:0060083!5.61e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.48e-16,235;DOID:14566,1.18e-15,239;DOID:0050687,6.38e-09,143;DOID:2531,1.11e-07,51;DOID:0060083,1.11e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:171493953..171493980,+ | |||
}} | }} |
Latest revision as of 00:20, 28 July 2015
Short description: | p@chr1:171493953..171493980, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171493953..171493980, + |
Coexpression cluster: | C852_CD14_CD4_Neutrophils_CD8_Natural_acute_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.21e-12 | 115 |
hematopoietic oligopotent progenitor cell | 9.64e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.64e-12 | 161 |
hematopoietic stem cell | 1.22e-11 | 168 |
classical monocyte | 4.24e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.24e-11 | 42 |
defensive cell | 5.50e-11 | 48 |
phagocyte | 5.50e-11 | 48 |
leukocyte | 7.41e-10 | 136 |
hematopoietic cell | 9.23e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.88e-09 | 120 |
monopoietic cell | 1.31e-07 | 59 |
monocyte | 1.31e-07 | 59 |
monoblast | 1.31e-07 | 59 |
promonocyte | 1.31e-07 | 59 |
myeloid cell | 2.85e-07 | 108 |
common myeloid progenitor | 2.85e-07 | 108 |
macrophage dendritic cell progenitor | 3.83e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.48e-16 | 235 |
disease of cellular proliferation | 1.18e-15 | 239 |
cell type cancer | 6.38e-09 | 143 |
hematologic cancer | 1.11e-07 | 51 |
immune system cancer | 1.11e-07 | 51 |