FFCP PHASE1:Hg19::chr1:171911363..171911369,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:171911363..171911369,+
|short_description=p@chr1:171911363..171911369,+
|description=CAGE_peak_at_chr1:171911363..171911369,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:171911363..171911369,+ | |||
|coexpression_cluster_id=C1127 | |||
|description=CAGE_peak_at_chr1:171911363..171911369,+ | |||
|id=chr1:171911363..171911369,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.25e-13;3!UBERON:0006222;2.28e-10;1!UBERON:0006601;1.16e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.49e-48!57;UBERON:0005068!2.49e-48!57;UBERON:0006241!2.49e-48!57;UBERON:0007135!2.49e-48!57;UBERON:0002616!2.85e-39!59;UBERON:0003075!2.58e-38!86;UBERON:0007284!2.58e-38!86;UBERON:0002346!7.22e-36!90;UBERON:0003080!4.08e-34!42;UBERON:0002780!1.06e-32!41;UBERON:0001890!1.06e-32!41;UBERON:0006240!1.06e-32!41;UBERON:0005743!1.17e-32!86;UBERON:0001017!1.15e-31!82;UBERON:0000955!5.92e-31!69;UBERON:0006238!5.92e-31!69;UBERON:0002020!1.61e-30!34;UBERON:0003528!1.61e-30!34;UBERON:0001893!5.30e-30!34;UBERON:0000073!1.93e-29!94;UBERON:0001016!1.93e-29!94;UBERON:0007023!2.20e-29!115;UBERON:0002791!7.63e-29!33;UBERON:0001869!4.26e-27!32;UBERON:0003056!1.88e-26!61;UBERON:0002619!1.90e-23!22;UBERON:0000153!1.61e-22!129;UBERON:0007811!1.61e-22!129;UBERON:0000033!2.71e-22!123;UBERON:0001950!1.83e-20!20;UBERON:0000956!5.26e-20!25;UBERON:0000203!5.26e-20!25;UBERON:0004121!2.43e-18!169;UBERON:0000924!1.59e-17!173;UBERON:0006601!1.59e-17!173;UBERON:0003076!5.50e-15!15;UBERON:0003057!5.50e-15!15;UBERON:0002298!7.35e-14!8;UBERON:0002308!2.59e-12!9;UBERON:0000125!2.59e-12!9;UBERON:0004733!5.00e-11!12;UBERON:0002028!5.00e-11!12;UBERON:0007277!5.00e-11!12;UBERON:0000025!1.04e-10!194;UBERON:0000200!2.13e-10!6;UBERON:0004732!5.35e-10!13;UBERON:0002420!2.58e-09!9;UBERON:0007245!2.58e-09!9;UBERON:0010009!2.58e-09!9;UBERON:0010011!2.58e-09!9;UBERON:0000454!2.58e-09!9;UBERON:0000064!3.13e-09!219;UBERON:0009663!3.40e-09!7;UBERON:0004111!3.79e-09!241;UBERON:0001872!8.38e-09!5;UBERON:0000477!8.77e-09!286;UBERON:0000062!4.71e-08!511;UBERON:0002680!4.63e-07!9;UBERON:0001895!4.63e-07!9;UBERON:0010092!4.63e-07!9;UBERON:0000480!9.23e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.21e-33;41!UBERON:0001890;4.21e-33;41!UBERON:0003528;4.43e-33;34!UBERON:0002020;4.43e-33;34!UBERON:0000073;2.88e-32;53!UBERON:0002616;2.88e-32;53!UBERON:0002791;7.64e-32;32!UBERON:0001869;5.27e-27;32!UBERON:0001893;7.34e-27;34!UBERON:0000125;3.85e-25;9!UBERON:0002308;3.85e-25;9!UBERON:0002619;3.93e-24;22!UBERON:0000956;3.05e-21;25!UBERON:0000203;3.05e-21;25!UBERON:0009663;4.40e-21;7!UBERON:0001950;2.17e-20;20!UBERON:0001875;5.42e-19;2!UBERON:0006514;5.42e-19;2!UBERON:0000955;7.96e-18;68!UBERON:0002021;4.87e-17;5!UBERON:0002420;1.85e-16;9!UBERON:0007245;1.85e-16;9!UBERON:0010009;1.85e-16;9!UBERON:0010011;1.85e-16;9!UBERON:0000454;1.85e-16;9!UBERON:0001017;2.95e-16;75!UBERON:0001016;6.48e-16;83!UBERON:0004733;1.47e-12;12!UBERON:0002028;1.47e-12;12!UBERON:0001894;2.45e-12;7!UBERON:0004732;1.32e-11;13!UBERON:0002038;7.39e-11;1!UBERON:0009661;7.39e-11;1!UBERON:0002950;7.39e-11;1!UBERON:0001891;7.39e-11;1!UBERON:0001874;2.28e-10;1!UBERON:0002784;3.70e-10;4!UBERON:0002680;6.67e-10;9!UBERON:0001895;6.67e-10;9!UBERON:0007023;1.40e-08;114!UBERON:0001872;3.78e-08;5!UBERON:0011216;5.60e-08;132!UBERON:0002037;3.04e-07;6!UBERON:0000200;6.28e-07;6!UBERON:0002298;6.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.18e-60,56;UBERON:0005068,1.18e-60,56;UBERON:0006241,1.18e-60,56;UBERON:0007135,1.18e-60,56;UBERON:0000073,1.06e-57,53;UBERON:0002616,1.06e-57,53;UBERON:0002780,7.60e-46,41;UBERON:0001890,7.60e-46,41;UBERON:0003080,7.60e-46,41;UBERON:0006240,7.60e-46,41;UBERON:0000955,6.85e-44,68;UBERON:0006238,6.85e-44,68;UBERON:0003528,1.37e-41,34;UBERON:0002020,1.37e-41,34;UBERON:0001017,8.83e-41,81;UBERON:0003075,8.83e-41,82;UBERON:0007284,8.83e-41,82;UBERON:0002346,8.94e-39,86;UBERON:0002791,1.55e-37,32;UBERON:0001016,1.64e-36,89;UBERON:0001893,2.74e-35,34;UBERON:0010371,1.23e-31,104;UBERON:0001869,2.53e-31,32;UBERON:0003056,2.66e-30,61;UBERON:0007023,6.39e-26,114;UBERON:0000125,1.72e-25,9;UBERON:0002308,1.72e-25,9;UBERON:0010314,2.33e-24,132;UBERON:0002619,4.69e-24,22;UBERON:0009663,2.62e-21,7;UBERON:0000956,3.56e-21,25;UBERON:0000203,3.56e-21,25;UBERON:0001950,2.57e-20,20;UBERON:0001875,1.36e-19,2;UBERON:0006514,1.36e-19,2;UBERON:0004121,6.53e-18,171;UBERON:0000924,6.53e-18,171;UBERON:0006601,6.53e-18,171;UBERON:0002021,5.60e-17,5;UBERON:0002420,1.24e-16,9;UBERON:0007245,1.24e-16,9;UBERON:0010009,1.24e-16,9;UBERON:0010011,1.24e-16,9;UBERON:0000454,1.24e-16,9;UBERON:0000025,7.58e-16,192;UBERON:0003076,2.38e-15,15;UBERON:0003057,2.38e-15,15;UBERON:0011216,1.33e-14,223;UBERON:0004733,1.20e-12,12;UBERON:0002028,1.20e-12,12;UBERON:0007277,1.20e-12,12;UBERON:0001894,3.82e-12,7;UBERON:0006222,3.82e-12,7;UBERON:0004111,4.54e-12,240;UBERON:0004732,1.09e-11,13;UBERON:0002038,6.73e-11,1;UBERON:0009661,6.73e-11,1;UBERON:0002950,6.73e-11,1;UBERON:0001891,6.73e-11,1;UBERON:0009616,6.73e-11,1;UBERON:0010286,6.73e-11,1;UBERON:0001874,3.96e-10,1;UBERON:0002784,4.98e-10,4;UBERON:0002680,5.74e-10,9;UBERON:0001895,5.74e-10,9;UBERON:0010092,5.74e-10,9;UBERON:0000483,8.74e-09,306;UBERON:0000119,1.14e-08,309;UBERON:0001872,4.22e-08,5;UBERON:0002037,3.14e-07,6;UBERON:0006215,3.14e-07,6;UBERON:0002298,4.95e-07,6;UBERON:0000200,6.29e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0.414656231081544,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0.964771509003264,3.05163472634166,3.20679853800551,0.591095237907095,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0.404406797884062,0,1.1713222286267,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.50648636764703,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,1.80126086612937,1.9166753044879,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.36203406111576,0,0,0,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.904980694530854,1.58679122091228,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.976210119215705,1.251909307065,0.573409195690071,1.44207766997908,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,2.23487402680012,0.41023272848151,1.26035848110859,0,0.645902582527404,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.202612753855184,1.56215619722769,1.03343398250592,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0,1.07140367175657,0,0,0,0,0,0,0.679697329768317,0.328863867814245,0,0.111231401892069,0,1.09980912941201,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0.196308467114945,1.48523200163543,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,3.29681041248338,0.157771562193185,0.271965960763659,1.30905207102113,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,1.33982065078089,0.829169439458779,2.27552590896169,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0.414656231081544,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0.964771509003264,3.05163472634166,3.20679853800551,0.591095237907095,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0.404406797884062,0,1.1713222286267,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.50648636764703,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,1.80126086612937,1.9166753044879,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.36203406111576,0,0,0,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.904980694530854,1.58679122091228,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.976210119215705,1.251909307065,0.573409195690071,1.44207766997908,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,2.23487402680012,0.41023272848151,1.26035848110859,0,0.645902582527404,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.202612753855184,1.56215619722769,1.03343398250592,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0,1.07140367175657,0,0,0,0,0,0,0.679697329768317,0.328863867814245,0,0.111231401892069,0,1.09980912941201,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0.196308467114945,1.48523200163543,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,3.29681041248338,0.157771562193185,0.271965960763659,1.30905207102113,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,1.33982065078089,0.829169439458779,2.27552590896169,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr1:171911363..171911369,+ | |||
}} | }} |
Latest revision as of 00:23, 28 July 2015
Short description: | p@chr1:171911363..171911369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171911363..171911369, + |
Coexpression cluster: | C1127_cerebellum_substantia_spinal_thalamus_medulla_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data