FFCP PHASE1:Hg19::chr8:18942407..18942448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIH3 | |UniProt=E5RIH3 | ||
|association_with_transcript=-167bp_to_ENST00000521475_5end | |association_with_transcript=-167bp_to_ENST00000521475_5end | ||
|cluster_id=chr8:18942407..18942448,- | |||
|coexpression_cluster_id=C1542 | |coexpression_cluster_id=C1542 | ||
|description=CAGE_peak_14_at_PSD3_5end | |description=CAGE_peak_14_at_PSD3_5end | ||
|id=chr8:18942407..18942448,- | |id=chr8:18942407..18942448,- | ||
|ontology_enrichment_celltype=CL:0000055!5.30e-24!180;CL:0000057!2.06e-19!75;CL:0000048!1.12e-18!430;CL:0000723!1.08e-17!436;CL:0000034!1.96e-16!444;CL:0002620!5.51e-16!23;CL:0002320!1.28e-13!365;CL:0002371!3.86e-12!591;CL:0000134!4.54e-12!358;CL:0000219!2.34e-10!390;CL:0000144!2.49e-10!625;CL:0000680!2.03e-08!57;CL:0000056!2.03e-08!57;CL:0000355!2.03e-08!57;CL:0000187!9.71e-07!54 | |ontology_enrichment_celltype=CL:0000055!5.30e-24!180;CL:0000057!2.06e-19!75;CL:0000048!1.12e-18!430;CL:0000723!1.08e-17!436;CL:0000034!1.96e-16!444;CL:0002620!5.51e-16!23;CL:0002320!1.28e-13!365;CL:0002371!3.86e-12!591;CL:0000134!4.54e-12!358;CL:0000219!2.34e-10!390;CL:0000144!2.49e-10!625;CL:0000680!2.03e-08!57;CL:0000056!2.03e-08!57;CL:0000355!2.03e-08!57;CL:0000187!9.71e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.31e-11;23!CL:0000056;1.87e-11;4!CL:0000138;2.83e-11;6!CL:0000153;2.54e-10;9!CL:0000447;2.54e-10;9!CL:0000515;3.58e-09;3!CL:0002556;1.63e-07;6!CL:0002540;5.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.16e-12,23;CL:0000515,1.37e-11,4;CL:0000058,3.31e-11,6;CL:0000138,3.31e-11,6;CL:0000057,6.57e-11,76;CL:0000153,2.87e-10,9;CL:0000447,2.87e-10,9;CL:0002556,1.60e-07,6;CL:0002540,7.62e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;1.87e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!8.06e-07!14 | |ontology_enrichment_disease=DOID:2394!8.06e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:17;1.27e-08;5!DOID:450;1.27e-08;5!DOID:66;1.27e-08;5!DOID:423;1.27e-08;5!DOID:0080000;1.27e-08;5!DOID:11722;1.27e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.22e-09,5;DOID:450,7.22e-09,5;DOID:66,7.22e-09,5;DOID:423,7.22e-09,5;DOID:0080000,7.22e-09,5;DOID:11722,7.22e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.19e-14!375;UBERON:0000914!1.64e-13!83;UBERON:0002329!1.64e-13!83;UBERON:0003077!1.64e-13!83;UBERON:0003059!1.64e-13!83;UBERON:0007282!1.64e-13!83;UBERON:0009618!1.64e-13!83;UBERON:0007285!1.64e-13!83;UBERON:0002204!2.23e-11!167;UBERON:0004290!4.07e-10!70;UBERON:0000486!1.11e-08!82;UBERON:0001134!6.27e-08!61;UBERON:0002036!6.27e-08!61;UBERON:0003082!6.27e-08!61;UBERON:0005256!1.24e-07!143;UBERON:0002097!1.70e-07!40;UBERON:0002385!2.32e-07!63;UBERON:0001015!2.32e-07!63;UBERON:0000383!2.32e-07!63;UBERON:0002199!2.95e-07!45;UBERON:0002416!2.95e-07!45;UBERON:0000479!9.61e-07!787 | |ontology_enrichment_uberon=UBERON:0002384!1.19e-14!375;UBERON:0000914!1.64e-13!83;UBERON:0002329!1.64e-13!83;UBERON:0003077!1.64e-13!83;UBERON:0003059!1.64e-13!83;UBERON:0007282!1.64e-13!83;UBERON:0009618!1.64e-13!83;UBERON:0007285!1.64e-13!83;UBERON:0002204!2.23e-11!167;UBERON:0004290!4.07e-10!70;UBERON:0000486!1.11e-08!82;UBERON:0001134!6.27e-08!61;UBERON:0002036!6.27e-08!61;UBERON:0003082!6.27e-08!61;UBERON:0005256!1.24e-07!143;UBERON:0002097!1.70e-07!40;UBERON:0002385!2.32e-07!63;UBERON:0001015!2.32e-07!63;UBERON:0000383!2.32e-07!63;UBERON:0002199!2.95e-07!45;UBERON:0002416!2.95e-07!45;UBERON:0000479!9.61e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0001434;1.26e-11;36!UBERON:0000075;1.58e-11;16!UBERON:0004765;2.23e-09;26!UBERON:0011135;2.67e-08;5!UBERON:0002216;2.67e-08;5!UBERON:0011134;2.67e-08;5!UBERON:0002209;2.67e-08;5!UBERON:0002213;2.67e-08;5!UBERON:0007844;2.67e-08;5!UBERON:0011138;2.67e-08;5!UBERON:0001130;2.67e-08;5!UBERON:0001066;2.67e-08;5!UBERON:0001468;2.67e-08;5!UBERON:0004905;9.11e-08;8!UBERON:0000982;9.11e-08;8!UBERON:0004770;9.11e-08;8!UBERON:0001758;1.63e-07;6!UBERON:0003672;1.63e-07;6!UBERON:0002371;4.58e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000075,1.67e-11,16;UBERON:0011135,2.18e-08,5;UBERON:0002216,2.18e-08,5;UBERON:0011134,2.18e-08,5;UBERON:0002209,2.18e-08,5;UBERON:0002213,2.18e-08,5;UBERON:0005856,2.18e-08,5;UBERON:0005866,2.18e-08,5;UBERON:0005863,2.18e-08,5;UBERON:0007844,2.18e-08,5;UBERON:0011138,2.18e-08,5;UBERON:0001130,2.18e-08,5;UBERON:0001066,2.18e-08,5;UBERON:0001468,2.18e-08,5;UBERON:0011137,3.39e-08,14;UBERON:0004905,7.81e-08,8;UBERON:0000982,7.81e-08,8;UBERON:0004770,7.81e-08,8;UBERON:0001758,1.60e-07,6;UBERON:0003672,1.60e-07,6;UBERON:0002384,3.44e-07,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,3.09415882400117,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54934401160603,1.70603078984906,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,1.28371610830437,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,1.20118796110804,2.29900975981793,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,3.2529523714611,3.50936537445123,1.15877215168659,6.36228757640879,3.89307896242109,0,0,0.175669571386252,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.926864265692532,2.29469296599051,0.354668382198357,0,0,0,0.933633106199299,0,0,0,0.576175924479999,0,0.624320153660641,0.570471821544449,0.747243402759005,0.23486899728753,0.485618833104395,0.842704840213491,3.87892925384297,0.491337269247072,2.06651562351531,0,1.7308685049499,0,1.43723628363248,0.336672227908132,0.500474079487857,3.60183350129438,3.07284334616587,3.37136575378922,2.70428506031874,0,4.66413052791041,1.70845911054854,1.90738711043606,6.60200411385685,0.92747276314595,6.44101350114073,1.67505170698431,2.02531598689519,0.389748020644795,9.84491719552046,0.736399189138395,0.646584227275248,5.68015348026583,1.71278566986988,0.508681776931463,0,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0.845302752556,0,0,0.771622122786426,0,1.0656887160644,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,2.85273810081437,2.46128221334885,5.13690806375959,6.98337756635593,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,2.50085260529839,0.271265023699736,0,0.178428988797162,0.315404830067869,0.819989904948992,0.902838299183157,0,0,2.65690239414175,0,0.60818530127658,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0.616838775210622,0.532685175939381,1.23190734020714,0.519254429183621,0.464841513839837,0,0,0,0,0.182091168006717,0,0,0.616122696835318,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,2.12675580242668,0.308097234229289,0.15350367472613,0.137836572484531,0.644521469209642,0.290033387828457,0.93749290157711,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0,0,4.11293252134344,0.762520775695299,0,0,3.81843897511124,0,0.539617372749944,1.09814811894422,0.589062011728432,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0.424216295861138,1.13008116620243,0.551365343546124,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0.573645408816206,0.392996164052485,1.07001315444375,0.709522128141196,0.633322905892992,2.30506425071931,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,6.45590489132854,0,0,0.19924798825107,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0.802577647298789,0,0.547364367646998,0,19.1796499831933,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0.548167698587004,0.397429223405979,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0.67952103036807,1.15063130943567,0.407992870545287,1.73370353940911,0,0,0,2.57859264851974,0.262887354279314,2.23425921017803,0.458320848023367,1.43574604915363,0,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,5.55790751931819,0,0,0,0,0,0,0,1.19730191562487,0,9.37134119819819,0.339936274560377,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,1.32582103692562,2.26411111577318,4.44905610798268,0.686520205190771,0.453692771289717,0.466311601748341,0.591420599958536,0.159296767163702,0.899606224327209,0.310525913752519,0.414706207840855,0.265841714557995,2.08698024724694,0.150257608997218,0,0.813741466409323,0.909243296012797,0.537052785212442,0.928067519756987,0.796191777397232,1.200083293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|short_description=p14@PSD3 | |short_description=p14@PSD3 | ||
}} | }} |
Latest revision as of 06:55, 17 September 2015
Short description: | p14@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PSD3_5end |
Coexpression cluster: | C1542_Fibroblast_ductal_liposarcoma_large_normal_mesenchymal_Myoblast |
Association with transcript: | -167bp_to_ENST00000521475_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RIH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.16e-12 | 23 |
skeletal muscle myoblast | 1.37e-11 | 4 |
chondroblast | 3.31e-11 | 6 |
chondrocyte | 3.31e-11 | 6 |
fibroblast | 6.57e-11 | 76 |
GAG secreting cell | 2.87e-10 | 9 |
carbohydrate secreting cell | 2.87e-10 | 9 |
fibroblast of periodontium | 1.60e-07 | 6 |
mesenchymal stem cell of the bone marrow | 7.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
subdivision of skeletal system | 1.67e-11 | 16 |
intervertebral cartilage | 2.18e-08 | 5 |
symphysis | 2.18e-08 | 5 |
nonsynovial joint | 2.18e-08 | 5 |
fibrous joint | 2.18e-08 | 5 |
cartilaginous joint | 2.18e-08 | 5 |
developing mesenchymal condensation | 2.18e-08 | 5 |
pre-cartilage condensation | 2.18e-08 | 5 |
cartilaginous condensation | 2.18e-08 | 5 |
cartilage element | 2.18e-08 | 5 |
post-cranial axial skeletal system | 2.18e-08 | 5 |
vertebral column | 2.18e-08 | 5 |
intervertebral disk | 2.18e-08 | 5 |
intervertebral joint | 2.18e-08 | 5 |
axial skeletal system | 3.39e-08 | 14 |
articulation | 7.81e-08 | 8 |
skeletal joint | 7.81e-08 | 8 |
articular system | 7.81e-08 | 8 |
periodontium | 1.60e-07 | 6 |
dentition | 1.60e-07 | 6 |
connective tissue | 3.44e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.22e-09 | 5 |
myotonic disease | 7.22e-09 | 5 |
muscle tissue disease | 7.22e-09 | 5 |
myopathy | 7.22e-09 | 5 |
muscular disease | 7.22e-09 | 5 |
myotonic dystrophy | 7.22e-09 | 5 |