FFCP PHASE1:Hg19::chr13:73636252..73636307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=688 | |EntrezGene=688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6349 | |HGNC=6349 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-398bp_to_ENST00000464404_5end | |association_with_transcript=-398bp_to_ENST00000464404_5end | ||
|cluster_id=chr13:73636252..73636307,+ | |||
|coexpression_cluster_id=C1709 | |coexpression_cluster_id=C1709 | ||
|description=CAGE_peak_2_at_KLF5_5end | |description=CAGE_peak_2_at_KLF5_5end | ||
|id=chr13:73636252..73636307,+ | |id=chr13:73636252..73636307,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.20e-20!254;CL:0002076!4.72e-14!43;CL:0000223!3.94e-10!59;CL:0002251!3.86e-08!21 | |ontology_enrichment_celltype=CL:0000066!9.20e-20!254;CL:0002076!4.72e-14!43;CL:0000223!3.94e-10!59;CL:0002251!3.86e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.86e-15;42!CL:0002251;5.24e-11;20!CL:0000622;5.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.69e-20,42;CL:0000066,6.91e-18,253;CL:0000223,6.00e-16,58;CL:0002251,3.86e-11,20;CL:0000622,6.82e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.64e-09;58!UBERON:0006595;7.84e-08;86 | |||
|ontology_enrichment_disease=DOID:305!6.02e-18!106;DOID:0050687!7.13e-15!143;DOID:299!4.64e-08!25;DOID:1749!9.09e-07!14 | |ontology_enrichment_disease=DOID:305!6.02e-18!106;DOID:0050687!7.13e-15!143;DOID:299!4.64e-08!25;DOID:1749!9.09e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;1.99e-09;25!DOID:1749;3.94e-09;14!DOID:305;6.28e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.13e-22,106;DOID:0050687,1.19e-15,143;DOID:299,2.11e-09,25;DOID:1749,7.72e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.82e-18!169;UBERON:0000925!4.82e-18!169;UBERON:0006595!4.82e-18!169;UBERON:0001007!4.73e-14!155;UBERON:0001555!4.73e-14!155;UBERON:0007026!4.73e-14!155;UBERON:0004921!1.26e-12!129;UBERON:0004185!1.26e-12!129;UBERON:0000077!1.36e-10!130;UBERON:0005156!4.50e-10!59;UBERON:0000990!4.50e-10!59;UBERON:0001004!7.85e-10!72;UBERON:0000161!2.68e-08!35;UBERON:0003133!2.64e-07!48;UBERON:0000065!3.12e-07!53;UBERON:0003101!7.19e-07!22;UBERON:0000079!7.19e-07!22;UBERON:0000062!7.90e-07!511 | |ontology_enrichment_uberon=UBERON:0004119!4.82e-18!169;UBERON:0000925!4.82e-18!169;UBERON:0006595!4.82e-18!169;UBERON:0001007!4.73e-14!155;UBERON:0001555!4.73e-14!155;UBERON:0007026!4.73e-14!155;UBERON:0004921!1.26e-12!129;UBERON:0004185!1.26e-12!129;UBERON:0000077!1.36e-10!130;UBERON:0005156!4.50e-10!59;UBERON:0000990!4.50e-10!59;UBERON:0001004!7.85e-10!72;UBERON:0000161!2.68e-08!35;UBERON:0003133!2.64e-07!48;UBERON:0000065!3.12e-07!53;UBERON:0003101!7.19e-07!22;UBERON:0000079!7.19e-07!22;UBERON:0000062!7.90e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.81e-11;33!UBERON:0001041;9.98e-09;14!UBERON:0001737;8.13e-08;9!UBERON:0001557;8.13e-08;9!UBERON:0005409;8.74e-08;22!UBERON:0000974;1.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.45e-22,160;UBERON:0000925,1.45e-22,160;UBERON:0006595,1.45e-22,160;UBERON:0001007,1.16e-16,145;UBERON:0001555,1.16e-16,145;UBERON:0007026,1.16e-16,145;UBERON:0004921,2.13e-14,118;UBERON:0000161,2.43e-10,36;UBERON:0001004,3.95e-10,74;UBERON:0005156,9.59e-09,59;UBERON:0000990,9.59e-09,59;UBERON:0001737,4.26e-08,9;UBERON:0001041,1.50e-07,87;UBERON:0000065,2.84e-07,54;UBERON:0001557,3.65e-07,19;UBERON:0000166,9.39e-07,22 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0,0.873765488520689,0.263766978228454,0.618831764800233,2.98257638155124,0,3.01347264011988,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0,0,0,0.0787107813136792,1.96682138424452,0,0.154816123316076,0,0.90361775633475,5.17655614233503,0.154934401160603,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0.726991193897824,0,0,0.464858073811369,0,0.619412741790207,0.28769239232215,0,0.236482229888585,1.37898272294647,0,0,0,0,0,1.83650335422542,0.320929027076094,0,0.329851300186716,0,1.27867425159808,0,0,0,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.512365278902701,0.650296737799391,0,0,0.289803085735052,0.14828656316206,0.535081656179426,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.378139268656271,0.665188192387692,0.351339142772504,0.785874452986276,1.45718115317017,2.22470665670658,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,2.61656431285521,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,1.07633781413317,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0,1.15956511897978,0.818238361772504,0,0.121973706129595,0,0.116193942869518,0.621966330092223,0.504641701751257,0.36497735907583,0,1.92972281457866,0,0.928735856063958,0,2.24782920075703,1.34867752062481,2.89213235860178,1.65440959098591,2.61455332910887,3.55905928666645,1.21348177344148,1.56977172100277,1.92373578473195,0,0,0.8231480226628,0,0,0,0,0,3.56666471775029,0.514703430895577,2.74375713521564,0,3.51851403440708,3.79612625149971,0,0,0,0.231860809950154,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0.93733833986777,1.51183915378974,0.283550194484773,4.92571874865666,4.35950907770943,0.383382679165211,0,0,0.414656231081544,0,0.12624243342638,0.317489471460845,0.763976851116555,0,0,0.514137463516618,0.300343057843917,0,0,0.43596006883328,0,0,0,0,0.797814349754612,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0.723906533337896,1.43833425785268,0.716243852959582,0,0.197030760201927,0.215627574859517,0.641715181398742,0.254094624222463,0,0.773288812777695,0,2.55175500661265,5.24304916763028,2.99161459204025,8.70272578215674,0.858840442033979,1.00034104211935,0.542530047399471,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0,0.195801157462741,1.37257369524342,0,1.72571360654893,0.213455115606889,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0.511707249066704,0,1.48418066444991,0,0,0.164254312027618,0,0,5.07609688284813,2.6065841139427,16.3904160305895,1.14814448164607,0.182091168006717,0.786746489756545,0.902399225814824,1.00119938235739,0,0,1.37217117560738,0,0,0.431831832204279,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0.328014645699706,1.95227036798582,1.23649213977267,0.0915694648183434,0.41254749960294,1.14853107599234,7.15066270640173,0,1.16004861950546,0.154048617114644,0,1.37836572484531,0.107420244868274,0.580066775656914,0.340906509664404,1.4245125703478,7.10725136052206,6.91884242514382,1.40373983744043,6.17062463218855,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.731140468893853,0,0.409499734223957,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,2.59799704358883,0.670302275535787,0,0.564862804660675,2.15252686335615,3.36942951335251,2.66058092122005,1.37834040124176,0,0,0,0,0,0,0,0,0,3.84991942105343,3.43056302373444,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,3.55567026775618,0.146508179271894,0.121360521749513,0,0,2.86493381685228,2.07875276582847,3.99308912729002,0.994147647766298,0.140669416410513,0.111308705022906,0,3.3780065300479,0.796991953004279,1.10513566212459,0.503865495708552,0.409074730008619,0,0,1.16828856491525,4.47552936689023,0,1.7755813014648,0,0,0,0.0927680981618513,0,0.7812832832557,0,0,3.07242310370849,1.77977555204936,0.472775363535873,0.344743373241465,0,0.347249989866585,0,1.3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| ||
|short_description=p2@KLF5 | |short_description=p2@KLF5 | ||
}} | }} |
Latest revision as of 22:34, 17 September 2015
Short description: | p2@KLF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLF5_5end |
Coexpression cluster: | C1709_salivary_signet_Prostate_cervical_keratoacanthoma_rectal_tubular |
Association with transcript: | -398bp_to_ENST00000464404_5end |
EntrezGene: | KLF5 |
HGNC: | 6349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.69e-20 | 42 |
epithelial cell | 6.91e-18 | 253 |
endodermal cell | 6.00e-16 | 58 |
epithelial cell of alimentary canal | 3.86e-11 | 20 |
acinar cell | 6.82e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.45e-22 | 160 |
endoderm | 1.45e-22 | 160 |
presumptive endoderm | 1.45e-22 | 160 |
digestive system | 1.16e-16 | 145 |
digestive tract | 1.16e-16 | 145 |
primitive gut | 1.16e-16 | 145 |
subdivision of digestive tract | 2.13e-14 | 118 |
orifice | 2.43e-10 | 36 |
respiratory system | 3.95e-10 | 74 |
reproductive structure | 9.59e-09 | 59 |
reproductive system | 9.59e-09 | 59 |
larynx | 4.26e-08 | 9 |
foregut | 1.50e-07 | 87 |
respiratory tract | 2.84e-07 | 54 |
upper respiratory tract | 3.65e-07 | 19 |
oral opening | 9.39e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.13e-22 | 106 |
cell type cancer | 1.19e-15 | 143 |
adenocarcinoma | 2.11e-09 | 25 |
squamous cell carcinoma | 7.72e-09 | 14 |