FFCP PHASE1:Hg19::chr12:6748431..6748461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57121 | |EntrezGene=57121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13307 | |HGNC=13307 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-228bp_to_uc010sff.1_5end | |association_with_transcript=-228bp_to_uc010sff.1_5end | ||
|cluster_id=chr12:6748431..6748461,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_4_at_LPAR5_5end | |description=CAGE_peak_4_at_LPAR5_5end | ||
|id=chr12:6748431..6748461,- | |id=chr12:6748431..6748461,- | ||
|ontology_enrichment_celltype=CL:0000037!6.44e-17!172;CL:0000566!6.44e-17!172;CL:0000988!7.12e-16!182;CL:0002032!2.17e-15!165;CL:0000837!2.17e-15!165;CL:0000094!1.42e-14!8;CL:0000763!2.32e-13!112;CL:0000049!2.32e-13!112;CL:0000738!1.71e-10!140;CL:0000081!4.38e-10!11;CL:0002274!4.33e-09!5;CL:0000457!4.33e-09!5;CL:0002191!4.33e-09!5;CL:0000097!4.33e-09!5;CL:0000831!4.33e-09!5;CL:0002028!4.33e-09!5;CL:0000236!6.22e-09!14;CL:0000766!6.88e-08!76 | |ontology_enrichment_celltype=CL:0000037!6.44e-17!172;CL:0000566!6.44e-17!172;CL:0000988!7.12e-16!182;CL:0002032!2.17e-15!165;CL:0000837!2.17e-15!165;CL:0000094!1.42e-14!8;CL:0000763!2.32e-13!112;CL:0000049!2.32e-13!112;CL:0000738!1.71e-10!140;CL:0000081!4.38e-10!11;CL:0002274!4.33e-09!5;CL:0000457!4.33e-09!5;CL:0002191!4.33e-09!5;CL:0000097!4.33e-09!5;CL:0000831!4.33e-09!5;CL:0002028!4.33e-09!5;CL:0000236!6.22e-09!14;CL:0000766!6.88e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.55e-24;8!CL:0000081;4.43e-17;11!CL:0000775;6.88e-13;3!CL:0000226;9.13e-13;3!CL:0000842;9.13e-13;3!CL:0000097;9.16e-13;5!CL:0000236;4.00e-10;13!CL:0000771;6.69e-09;2!CL:0000163;4.03e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.36e-24,8;CL:0000081,3.92e-17,11;CL:0000037,4.95e-15,168;CL:0000988,6.60e-14,177;CL:0000775,6.48e-13,3;CL:0000226,8.60e-13,3;CL:0000842,8.60e-13,3;CL:0000097,9.45e-13,5;CL:0002028,9.45e-13,5;CL:0002032,2.73e-12,161;CL:0000837,2.73e-12,161;CL:0000763,6.37e-11,108;CL:0000049,6.37e-11,108;CL:0000236,2.16e-09,14;CL:0000771,5.47e-09,2;CL:0000738,1.31e-08,136;CL:0000163,4.10e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.04e-11!8 | |ontology_enrichment_disease=DOID:1036!4.04e-11!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;8.35e-13;8!DOID:8692;2.41e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.22e-13,8;DOID:8692,4.91e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.52e-17!15;UBERON:0000179!1.52e-17!15;UBERON:0000463!1.52e-17!15;UBERON:0007023!4.37e-14!115;UBERON:0002390!8.77e-09!102;UBERON:0003061!8.77e-09!102;UBERON:0002193!2.74e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!1.52e-17!15;UBERON:0000179!1.52e-17!15;UBERON:0000463!1.52e-17!15;UBERON:0007023!4.37e-14!115;UBERON:0002390!8.77e-09!102;UBERON:0003061!8.77e-09!102;UBERON:0002193!2.74e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.33e-38;15!UBERON:0000179;1.33e-38;15!UBERON:0000463;1.33e-38;15!UBERON:0002390;1.16e-21;32!UBERON:0002193;1.46e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.27e-38,15;UBERON:0000179,1.27e-38,15;UBERON:0000463,1.27e-38,15;UBERON:0002390,2.01e-10,98;UBERON:0003061,2.01e-10,98;UBERON:0002193,4.58e-09,108 | |||
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| ||
|short_description=p4@LPAR5 | |short_description=p4@LPAR5 | ||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p4@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LPAR5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -228bp_to_uc010sff.1_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.36e-24 | 8 |
blood cell | 3.92e-17 | 11 |
hematopoietic stem cell | 4.95e-15 | 168 |
hematopoietic cell | 6.60e-14 | 177 |
neutrophil | 6.48e-13 | 3 |
single nucleate cell | 8.60e-13 | 3 |
mononuclear cell | 8.60e-13 | 3 |
mast cell | 9.45e-13 | 5 |
basophil mast progenitor cell | 9.45e-13 | 5 |
hematopoietic oligopotent progenitor cell | 2.73e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.73e-12 | 161 |
myeloid cell | 6.37e-11 | 108 |
common myeloid progenitor | 6.37e-11 | 108 |
B cell | 2.16e-09 | 14 |
eosinophil | 5.47e-09 | 2 |
leukocyte | 1.31e-08 | 136 |
endocrine cell | 4.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.27e-38 | 15 |
haemolymphatic fluid | 1.27e-38 | 15 |
organism substance | 1.27e-38 | 15 |
hematopoietic system | 2.01e-10 | 98 |
blood island | 2.01e-10 | 98 |
hemolymphoid system | 4.58e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.22e-13 | 8 |
myeloid leukemia | 4.91e-07 | 31 |