FFCP PHASE1:Hg19::chr17:425270..425295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:425270..425295,- | |||
|coexpression_cluster_id=C502 | |coexpression_cluster_id=C502 | ||
|description=CAGE_peak_at_chr17:425270..425295,- | |description=CAGE_peak_at_chr17:425270..425295,- | ||
|id=chr17:425270..425295,- | |id=chr17:425270..425295,- | ||
|ontology_enrichment_celltype=CL:0000075!3.42e-10!27;CL:0000064!8.86e-10!3;CL:0005012!8.86e-10!3;CL:0000067!8.86e-10!3;CL:0002304!8.86e-10!3;CL:0000197!1.12e-09!6;CL:0000098!1.12e-09!6;CL:0002167!1.12e-09!6;CL:0000710!3.35e-07!20;CL:1000449!5.80e-07!16;CL:1000507!7.21e-07!12;CL:1000494!7.21e-07!12 | |ontology_enrichment_celltype=CL:0000075!3.42e-10!27;CL:0000064!8.86e-10!3;CL:0005012!8.86e-10!3;CL:0000067!8.86e-10!3;CL:0002304!8.86e-10!3;CL:0000197!1.12e-09!6;CL:0000098!1.12e-09!6;CL:0002167!1.12e-09!6;CL:0000710!3.35e-07!20;CL:1000449!5.80e-07!16;CL:1000507!7.21e-07!12;CL:1000494!7.21e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.12e-17;19!CL:0000197;3.36e-14;6!CL:0000098;3.36e-14;6!CL:0002167;3.36e-14;6!CL:0002097;2.02e-11;2!CL:0000650;3.52e-11;2!CL:1000500;3.52e-11;2!CL:1000618;3.52e-11;2!CL:1001318;3.52e-11;2!CL:0002173;3.52e-11;2!CL:1000507;7.66e-09;10!CL:1000494;7.66e-09;10!CL:0000174;4.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.81e-17,19;CL:0000197,3.97e-14,6;CL:0000098,3.97e-14,6;CL:0002167,3.97e-14,6;CL:0002097,2.02e-11,2;CL:0000650,3.35e-11,2;CL:1000500,3.35e-11,2;CL:1000618,3.35e-11,2;CL:1001318,3.35e-11,2;CL:0002173,3.35e-11,2;CL:1000507,7.07e-09,10;CL:1000494,7.07e-09,10;CL:0000174,4.84e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;3.52e-11;2!DOID:1907;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,4.09e-11,2;DOID:1907,4.09e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001876;3.52e-11;2!UBERON:0003567;3.52e-11;2!UBERON:0003838;3.52e-11;2!UBERON:0003586;3.52e-11;2!UBERON:0005169;3.52e-11;2!UBERON:0002321;3.52e-11;2!UBERON:0005215;3.52e-11;2!UBERON:0002303;3.52e-11;2!UBERON:0002319;3.52e-11;2!UBERON:0004211;7.66e-09;10!UBERON:0009773;7.66e-09;10!UBERON:0001231;7.66e-09;10!UBERON:0004810;7.66e-09;10!UBERON:0002369;4.84e-08;3!UBERON:0001235;4.84e-08;3!UBERON:0006858;4.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,3.35e-11,2;UBERON:0003838,3.35e-11,2;UBERON:0003586,3.35e-11,2;UBERON:0005169,3.35e-11,2;UBERON:0002321,3.35e-11,2;UBERON:0005215,3.35e-11,2;UBERON:0002303,3.35e-11,2;UBERON:0002319,3.35e-11,2;UBERON:0001876,3.70e-11,2;UBERON:0004810,7.07e-09,10;UBERON:0002369,4.84e-08,3;UBERON:0001235,4.84e-08,3;UBERON:0006858,4.84e-08,3 | |||
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| ||
|short_description=p@chr17:425270..425295,- | |short_description=p@chr17:425270..425295,- | ||
}} | }} |
Latest revision as of 17:26, 25 July 2015
Short description: | p@chr17:425270..425295, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:425270..425295, - |
Coexpression cluster: | C502_mesothelioma_Basophils_liposarcoma_Olfactory_Fibroblast_mesenchymal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.81e-17 | 19 |
receptor cell | 3.97e-14 | 6 |
sensory epithelial cell | 3.97e-14 | 6 |
olfactory epithelial cell | 3.97e-14 | 6 |
cortical cell of adrenal gland | 2.02e-11 | 2 |
mesangial cell | 3.35e-11 | 2 |
kidney interstitial cell | 3.35e-11 | 2 |
juxtaglomerular complex cell | 3.35e-11 | 2 |
renal interstitial pericyte | 3.35e-11 | 2 |
extraglomerular mesangial cell | 3.35e-11 | 2 |
kidney tubule cell | 7.07e-09 | 10 |
nephron tubule epithelial cell | 7.07e-09 | 10 |
steroid hormone secreting cell | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 3.35e-11 | 2 |
abdominal segment connective tissue | 3.35e-11 | 2 |
trunk connective tissue | 3.35e-11 | 2 |
interstitial tissue | 3.35e-11 | 2 |
extraglomerular mesangium | 3.35e-11 | 2 |
kidney interstitium | 3.35e-11 | 2 |
juxtaglomerular apparatus | 3.35e-11 | 2 |
mesangium | 3.35e-11 | 2 |
amygdala | 3.70e-11 | 2 |
nephron tubule epithelium | 7.07e-09 | 10 |
adrenal gland | 4.84e-08 | 3 |
adrenal cortex | 4.84e-08 | 3 |
adrenal/interrenal gland | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 4.09e-11 | 2 |
malignant fibroxanthoma | 4.09e-11 | 2 |