FFCP PHASE1:Hg19::chr4:671780..671793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4636 | |EntrezGene=4636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7586 | |HGNC=7586 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA88 | |UniProt=D6RA88 | ||
|association_with_transcript=37bp_to_ENST00000513662_5end | |association_with_transcript=37bp_to_ENST00000513662_5end | ||
|cluster_id=chr4:671780..671793,+ | |||
|coexpression_cluster_id=C134 | |coexpression_cluster_id=C134 | ||
|description=CAGE_peak_5_at_MYL5_5end | |description=CAGE_peak_5_at_MYL5_5end | ||
|id=chr4:671780..671793,+ | |id=chr4:671780..671793,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.26e-20!9;CL:0002575!9.94e-09!2 | |ontology_enrichment_celltype=CL:0000188!1.26e-20!9;CL:0002575!9.94e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.03e-17;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.34e-17,9 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.31e-11;1!UBERON:0004874;2.18e-11;1!UBERON:0000358;2.42e-11;1!UBERON:0005425;4.44e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!3.43e-09!2;UBERON:0000341!3.87e-09!2;UBERON:0001134!5.08e-08!61;UBERON:0002036!5.08e-08!61;UBERON:0003082!5.08e-08!61;UBERON:0002385!1.11e-07!63;UBERON:0001015!1.11e-07!63;UBERON:0000383!1.11e-07!63 | |ontology_enrichment_uberon=UBERON:0001829!3.43e-09!2;UBERON:0000341!3.87e-09!2;UBERON:0001134!5.08e-08!61;UBERON:0002036!5.08e-08!61;UBERON:0003082!5.08e-08!61;UBERON:0002385!1.11e-07!63;UBERON:0001015!1.11e-07!63;UBERON:0000383!1.11e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.01e-29;16!UBERON:0002036;1.01e-29;16!UBERON:0002385;9.05e-15;31!UBERON:0001015;9.05e-15;31!UBERON:0000383;9.05e-15;31!UBERON:0001723;1.32e-14;3!UBERON:0001033;1.32e-14;3!UBERON:0002426;1.18e-11;1!UBERON:0003831;1.18e-11;1!UBERON:0003898;1.18e-11;1!UBERON:0004830;1.18e-11;1!UBERON:0003830;1.18e-11;1!UBERON:0005175;1.18e-11;1!UBERON:0001774;1.18e-11;1!UBERON:0001103;1.18e-11;1!UBERON:0001831;1.31e-11;1!UBERON:0001567;1.31e-11;1!UBERON:0007029;1.45e-11;1!UBERON:0000989;2.18e-11;1!UBERON:0008811;2.18e-11;1!UBERON:0000941;4.44e-11;1!UBERON:0001785;4.44e-11;1!UBERON:0002464;4.44e-11;1!UBERON:0004904;4.44e-11;1!UBERON:0001021;4.44e-11;1!UBERON:0000922;3.34e-07;49!UBERON:0001032;6.88e-07;24!UBERON:0004456;6.88e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.32e-14,3;UBERON:0001033,1.32e-14,3;UBERON:0010056,1.32e-14,3;UBERON:0002426,1.18e-11,1;UBERON:0003831,1.18e-11,1;UBERON:0003898,1.18e-11,1;UBERON:0004830,1.18e-11,1;UBERON:0003830,1.18e-11,1;UBERON:0005175,1.18e-11,1;UBERON:0001774,1.18e-11,1;UBERON:0001103,1.18e-11,1;UBERON:0010084,1.18e-11,1;UBERON:0001831,1.31e-11,1;UBERON:0001567,1.31e-11,1;UBERON:0008801,1.31e-11,1;UBERON:0007029,1.45e-11,1;UBERON:0000989,2.18e-11,1;UBERON:0008811,2.18e-11,1;UBERON:0006258,2.18e-11,1;UBERON:0005876,2.18e-11,1;UBERON:0004874,2.18e-11,1;UBERON:0000941,4.44e-11,1;UBERON:0001785,4.44e-11,1;UBERON:0002464,4.44e-11,1;UBERON:0004904,4.44e-11,1;UBERON:0001021,4.44e-11,1;UBERON:0003902,4.44e-11,1;UBERON:0005425,4.44e-11,1;UBERON:0001134,3.64e-07,62;UBERON:0002036,3.64e-07,62;UBERON:0003082,3.64e-07,62;UBERON:0002385,6.42e-07,64;UBERON:0001015,6.42e-07,64;UBERON:0000383,6.42e-07,64;UBERON:0000020,6.94e-07,24;UBERON:0001032,6.94e-07,24;UBERON:0004456,6.94e-07,24 | |||
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| ||
|short_description=p5@MYL5 | |short_description=p5@MYL5 | ||
}} | }} |
Latest revision as of 06:35, 18 September 2015
Short description: | p5@MYL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYL5_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 37bp_to_ENST00000513662_5end |
EntrezGene: | MYL5 |
HGNC: | 7586 |
UniProt: | D6RA88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.34e-17 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.32e-14 | 3 |
gustatory system | 1.32e-14 | 3 |
future tongue | 1.32e-14 | 3 |
chest muscle | 1.18e-11 | 1 |
respiratory system muscle | 1.18e-11 | 1 |
skeletal muscle of trunk | 1.18e-11 | 1 |
respiratory system skeletal muscle | 1.18e-11 | 1 |
thoracic segment muscle | 1.18e-11 | 1 |
chest organ | 1.18e-11 | 1 |
muscle of trunk | 1.18e-11 | 1 |
diaphragm | 1.18e-11 | 1 |
future diaphragm | 1.18e-11 | 1 |
parotid gland | 1.31e-11 | 1 |
cheek | 1.31e-11 | 1 |
parotid gland primordium | 1.31e-11 | 1 |
surface | 1.45e-11 | 1 |
penis | 2.18e-11 | 1 |
intromittent organ | 2.18e-11 | 1 |
lateral plate mesenchyme | 2.18e-11 | 1 |
undifferentiated genital tubercle | 2.18e-11 | 1 |
somatopleure | 2.18e-11 | 1 |
cranial nerve II | 4.44e-11 | 1 |
cranial nerve | 4.44e-11 | 1 |
nerve trunk | 4.44e-11 | 1 |
nerve connecting eye with brain | 4.44e-11 | 1 |
nerve | 4.44e-11 | 1 |
retinal neural layer | 4.44e-11 | 1 |
presumptive neural retina | 4.44e-11 | 1 |
skeletal muscle tissue | 3.64e-07 | 62 |
striated muscle tissue | 3.64e-07 | 62 |
myotome | 3.64e-07 | 62 |
muscle tissue | 6.42e-07 | 64 |
musculature | 6.42e-07 | 64 |
musculature of body | 6.42e-07 | 64 |
sense organ | 6.94e-07 | 24 |
sensory system | 6.94e-07 | 24 |
entire sense organ system | 6.94e-07 | 24 |