FFCP PHASE1:Hg19::chr18:74729004..74729019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt=P02686,A8MUU4,A8MZH3,E9PMR5,F5H7N4,E9PLU9,E9PQE7 | |UniProt=P02686,A8MUU4,A8MZH3,E9PMR5,F5H7N4,E9PLU9,E9PQE7 | ||
|association_with_transcript=0bp_to_ENST00000397866,ENST00000397868,ENST00000397869,ENST00000397875,ENST00000459948,ENST00000467108,ENST00000473302,ENST00000482445,ENST00000483025,ENST00000493623,ENST00000527975,ENST00000528160_5end | |association_with_transcript=0bp_to_ENST00000397866,ENST00000397868,ENST00000397869,ENST00000397875,ENST00000459948,ENST00000467108,ENST00000473302,ENST00000482445,ENST00000483025,ENST00000493623,ENST00000527975,ENST00000528160_5end | ||
|cluster_id=chr18:74729004..74729019,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_MBP_5end | |description=CAGE_peak_1_at_MBP_5end | ||
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|ontology_enrichment_celltype=CL:0000148!2.90e-07!10;CL:0000541!2.90e-07!10 | |ontology_enrichment_celltype=CL:0000148!2.90e-07!10;CL:0000541!2.90e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.21e-07;10 | |ontology_enrichment_celltype_v019=CL:0000148;1.21e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.21e-07,10;CL:0000541,1.21e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.05e-19;82!UBERON:0002532;2.10e-07;206!UBERON:0010316;2.10e-07;206!UBERON:0006241;6.35e-07;3!UBERON:0003057;6.35e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;3.05e-19;82!UBERON:0002532;2.10e-07;206!UBERON:0010316;2.10e-07;206!UBERON:0006241;6.35e-07;3!UBERON:0003057;6.35e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-77!115;UBERON:0001049!5.76e-56!57;UBERON:0005068!5.76e-56!57;UBERON:0006241!5.76e-56!57;UBERON:0007135!5.76e-56!57;UBERON:0005743!5.58e-46!86;UBERON:0002616!6.86e-46!59;UBERON:0001017!8.20e-46!82;UBERON:0003075!5.00e-44!86;UBERON:0007284!5.00e-44!86;UBERON:0003080!6.29e-44!42;UBERON:0000955!2.58e-43!69;UBERON:0006238!2.58e-43!69;UBERON:0002780!5.16e-43!41;UBERON:0001890!5.16e-43!41;UBERON:0006240!5.16e-43!41;UBERON:0000073!1.91e-41!94;UBERON:0001016!1.91e-41!94;UBERON:0002346!4.19e-41!90;UBERON:0002020!1.83e-37!34;UBERON:0003528!1.83e-37!34;UBERON:0001893!1.93e-37!34;UBERON:0002791!3.93e-36!33;UBERON:0001869!1.22e-34!32;UBERON:0003056!7.37e-33!61;UBERON:0000153!6.10e-31!129;UBERON:0007811!6.10e-31!129;UBERON:0000033!5.49e-29!123;UBERON:0002619!3.72e-28!22;UBERON:0004121!3.45e-26!169;UBERON:0000956!7.86e-26!25;UBERON:0000203!7.86e-26!25;UBERON:0001950!9.82e-26!20;UBERON:0000924!5.07e-25!173;UBERON:0006601!5.07e-25!173;UBERON:0000025!8.14e-14!194;UBERON:0004111!1.36e-13!241;UBERON:0002308!3.87e-13!9;UBERON:0000125!3.87e-13!9;UBERON:0003076!8.14e-13!15;UBERON:0003057!8.14e-13!15;UBERON:0002420!9.64e-13!9;UBERON:0007245!9.64e-13!9;UBERON:0010009!9.64e-13!9;UBERON:0010011!9.64e-13!9;UBERON:0000454!9.64e-13!9;UBERON:0000477!4.12e-12!286;UBERON:0002298!6.75e-12!8;UBERON:0000062!7.13e-11!511;UBERON:0009663!1.90e-10!7;UBERON:0001871!2.14e-10!7;UBERON:0004732!2.15e-10!13;UBERON:0000483!2.74e-10!309;UBERON:0000119!5.73e-10!312;UBERON:0000475!2.13e-09!365;UBERON:0004733!3.96e-09!12;UBERON:0002028!3.96e-09!12;UBERON:0007277!3.96e-09!12;UBERON:0000200!6.07e-09!6;UBERON:0000481!3.53e-08!347;UBERON:0000349!1.42e-07!5;UBERON:0002021!1.60e-07!5;UBERON:0000064!1.84e-07!219;UBERON:0001872!2.01e-07!5;UBERON:0000922!3.09e-07!612;UBERON:0001894!5.75e-07!7;UBERON:0006222!5.75e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.11e-77!115;UBERON:0001049!5.76e-56!57;UBERON:0005068!5.76e-56!57;UBERON:0006241!5.76e-56!57;UBERON:0007135!5.76e-56!57;UBERON:0005743!5.58e-46!86;UBERON:0002616!6.86e-46!59;UBERON:0001017!8.20e-46!82;UBERON:0003075!5.00e-44!86;UBERON:0007284!5.00e-44!86;UBERON:0003080!6.29e-44!42;UBERON:0000955!2.58e-43!69;UBERON:0006238!2.58e-43!69;UBERON:0002780!5.16e-43!41;UBERON:0001890!5.16e-43!41;UBERON:0006240!5.16e-43!41;UBERON:0000073!1.91e-41!94;UBERON:0001016!1.91e-41!94;UBERON:0002346!4.19e-41!90;UBERON:0002020!1.83e-37!34;UBERON:0003528!1.83e-37!34;UBERON:0001893!1.93e-37!34;UBERON:0002791!3.93e-36!33;UBERON:0001869!1.22e-34!32;UBERON:0003056!7.37e-33!61;UBERON:0000153!6.10e-31!129;UBERON:0007811!6.10e-31!129;UBERON:0000033!5.49e-29!123;UBERON:0002619!3.72e-28!22;UBERON:0004121!3.45e-26!169;UBERON:0000956!7.86e-26!25;UBERON:0000203!7.86e-26!25;UBERON:0001950!9.82e-26!20;UBERON:0000924!5.07e-25!173;UBERON:0006601!5.07e-25!173;UBERON:0000025!8.14e-14!194;UBERON:0004111!1.36e-13!241;UBERON:0002308!3.87e-13!9;UBERON:0000125!3.87e-13!9;UBERON:0003076!8.14e-13!15;UBERON:0003057!8.14e-13!15;UBERON:0002420!9.64e-13!9;UBERON:0007245!9.64e-13!9;UBERON:0010009!9.64e-13!9;UBERON:0010011!9.64e-13!9;UBERON:0000454!9.64e-13!9;UBERON:0000477!4.12e-12!286;UBERON:0002298!6.75e-12!8;UBERON:0000062!7.13e-11!511;UBERON:0009663!1.90e-10!7;UBERON:0001871!2.14e-10!7;UBERON:0004732!2.15e-10!13;UBERON:0000483!2.74e-10!309;UBERON:0000119!5.73e-10!312;UBERON:0000475!2.13e-09!365;UBERON:0004733!3.96e-09!12;UBERON:0002028!3.96e-09!12;UBERON:0007277!3.96e-09!12;UBERON:0000200!6.07e-09!6;UBERON:0000481!3.53e-08!347;UBERON:0000349!1.42e-07!5;UBERON:0002021!1.60e-07!5;UBERON:0000064!1.84e-07!219;UBERON:0001872!2.01e-07!5;UBERON:0000922!3.09e-07!612;UBERON:0001894!5.75e-07!7;UBERON:0006222!5.75e-07!7 | ||
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|short_description=p1@MBP | |short_description=p1@MBP | ||
}} | }} |
Latest revision as of 17:34, 24 September 2015
Short description: | p1@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000397866, ENST00000397868, ENST00000397869, ENST00000397875, ENST00000459948, ENST00000467108, ENST00000473302, ENST00000482445, ENST00000483025, ENST00000493623, ENST00000527975, ENST00000528160_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | P02686A8MUU4A8MZH3E9PMR5F5H7N4E9PLU9E9PQE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.21e-07 | 10 |
melanoblast | 1.21e-07 | 10 |