FFCP PHASE1:Hg19::chr4:68411182..68411240,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1060 | |EntrezGene=1060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1854 | |HGNC=1854 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PIR0 | |UniProt=Q6PIR0 | ||
|association_with_transcript=0bp_to_ENST00000506882,ENST00000510189_5end | |association_with_transcript=0bp_to_ENST00000506882,ENST00000510189_5end | ||
|cluster_id=chr4:68411182..68411240,- | |||
|coexpression_cluster_id=C867 | |coexpression_cluster_id=C867 | ||
|description=CAGE_peak_1_at_CENPC1_5end | |description=CAGE_peak_1_at_CENPC1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!5.13e-35!172;CL:0000566!5.13e-35!172;CL:0002032!1.52e-31!165;CL:0000837!1.52e-31!165;CL:0000988!9.27e-30!182;CL:0000738!1.01e-28!140;CL:0002031!4.23e-22!124;CL:0002087!3.46e-20!119;CL:0000542!2.33e-17!53;CL:0000051!2.33e-17!53;CL:0000838!3.06e-17!52;CL:0000763!1.14e-14!112;CL:0000049!1.14e-14!112;CL:0000791!7.62e-11!18;CL:0000789!7.62e-11!18;CL:0002420!7.62e-11!18;CL:0002419!7.62e-11!18;CL:0000790!7.62e-11!18;CL:0000084!8.39e-10!25;CL:0000827!8.39e-10!25;CL:0000766!7.17e-09!76;CL:0000236!1.32e-07!14;CL:0000625!2.77e-07!11;CL:0000945!3.71e-07!24;CL:0000826!3.71e-07!24;CL:0000557!6.51e-07!71;CL:0000839!8.40e-07!70 | |ontology_enrichment_celltype=CL:0000037!5.13e-35!172;CL:0000566!5.13e-35!172;CL:0002032!1.52e-31!165;CL:0000837!1.52e-31!165;CL:0000988!9.27e-30!182;CL:0000738!1.01e-28!140;CL:0002031!4.23e-22!124;CL:0002087!3.46e-20!119;CL:0000542!2.33e-17!53;CL:0000051!2.33e-17!53;CL:0000838!3.06e-17!52;CL:0000763!1.14e-14!112;CL:0000049!1.14e-14!112;CL:0000791!7.62e-11!18;CL:0000789!7.62e-11!18;CL:0002420!7.62e-11!18;CL:0002419!7.62e-11!18;CL:0000790!7.62e-11!18;CL:0000084!8.39e-10!25;CL:0000827!8.39e-10!25;CL:0000766!7.17e-09!76;CL:0000236!1.32e-07!14;CL:0000625!2.77e-07!11;CL:0000945!3.71e-07!24;CL:0000826!3.71e-07!24;CL:0000557!6.51e-07!71;CL:0000839!8.40e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.91e-11;18!CL:0000789;6.91e-11;18!CL:0002419;6.91e-11;18!CL:0000542;1.02e-10;53!CL:0000084;8.37e-10;25!CL:0000236;1.37e-07;13!CL:0000625;2.67e-07;11!CL:0002087;3.27e-07;104!CL:0000945;3.47e-07;24 | |ontology_enrichment_celltype_v019=CL:0000791;6.91e-11;18!CL:0000789;6.91e-11;18!CL:0002419;6.91e-11;18!CL:0000542;1.02e-10;53!CL:0000084;8.37e-10;25!CL:0000236;1.37e-07;13!CL:0000625;2.67e-07;11!CL:0002087;3.27e-07;104!CL:0000945;3.47e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.70e-36,168;CL:0002032,5.83e-33,161;CL:0000837,5.83e-33,161;CL:0000988,7.90e-32,177;CL:0000738,3.15e-30,136;CL:0002031,1.85e-23,120;CL:0002087,1.69e-21,115;CL:0000542,2.32e-17,53;CL:0000051,2.32e-17,53;CL:0000838,3.05e-17,52;CL:0000763,9.58e-16,108;CL:0000049,9.58e-16,108;CL:0000791,7.61e-11,18;CL:0000789,7.61e-11,18;CL:0002420,7.61e-11,18;CL:0002419,7.61e-11,18;CL:0000790,7.61e-11,18;CL:0000766,7.70e-10,72;CL:0000084,8.38e-10,25;CL:0000827,8.38e-10,25;CL:0000557,9.59e-08,67;CL:0000839,1.24e-07,66;CL:0000236,1.32e-07,14;CL:0000625,2.77e-07,11;CL:0000945,3.70e-07,24;CL:0000826,3.70e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;6.91e-11;18!CL:0000051;1.02e-10;53 | |ontology_enrichment_development_v019=CL:0000790;6.91e-11;18!CL:0000051;1.02e-10;53 | ||
|ontology_enrichment_disease=DOID:1240!8.32e-07!39 | |ontology_enrichment_disease=DOID:1240!8.32e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:1240,8.31e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.12e-23!115;UBERON:0001049!2.77e-12!57;UBERON:0005068!2.77e-12!57;UBERON:0006241!2.77e-12!57;UBERON:0007135!2.77e-12!57;UBERON:0002780!2.51e-11!41;UBERON:0001890!2.51e-11!41;UBERON:0006240!2.51e-11!41;UBERON:0003080!3.94e-11!42;UBERON:0002616!2.64e-09!59;UBERON:0002390!5.28e-09!102;UBERON:0003061!5.28e-09!102;UBERON:0002020!6.00e-09!34;UBERON:0003528!6.00e-09!34;UBERON:0001017!6.04e-09!82;UBERON:0002791!1.40e-08!33;UBERON:0001893!1.40e-08!34;UBERON:0001869!3.92e-08!32;UBERON:0000955!5.06e-08!69;UBERON:0006238!5.06e-08!69;UBERON:0005743!5.62e-08!86;UBERON:0000073!1.03e-07!94;UBERON:0001016!1.03e-07!94;UBERON:0002193!5.06e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!7.12e-23!115;UBERON:0001049!2.77e-12!57;UBERON:0005068!2.77e-12!57;UBERON:0006241!2.77e-12!57;UBERON:0007135!2.77e-12!57;UBERON:0002780!2.51e-11!41;UBERON:0001890!2.51e-11!41;UBERON:0006240!2.51e-11!41;UBERON:0003080!3.94e-11!42;UBERON:0002616!2.64e-09!59;UBERON:0002390!5.28e-09!102;UBERON:0003061!5.28e-09!102;UBERON:0002020!6.00e-09!34;UBERON:0003528!6.00e-09!34;UBERON:0001017!6.04e-09!82;UBERON:0002791!1.40e-08!33;UBERON:0001893!1.40e-08!34;UBERON:0001869!3.92e-08!32;UBERON:0000955!5.06e-08!69;UBERON:0006238!5.06e-08!69;UBERON:0005743!5.62e-08!86;UBERON:0000073!1.03e-07!94;UBERON:0001016!1.03e-07!94;UBERON:0002193!5.06e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.30e-08;41!UBERON:0001890;1.30e-08;41!UBERON:0002791;5.70e-08;32!UBERON:0003528;9.36e-08;34!UBERON:0002020;9.36e-08;34!UBERON:0001869;1.38e-07;32!UBERON:0001893;2.11e-07;34!UBERON:0000073;3.06e-07;53!UBERON:0002616;3.06e-07;53!UBERON:0007023;4.89e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.30e-08;41!UBERON:0001890;1.30e-08;41!UBERON:0002791;5.70e-08;32!UBERON:0003528;9.36e-08;34!UBERON:0002020;9.36e-08;34!UBERON:0001869;1.38e-07;32!UBERON:0001893;2.11e-07;34!UBERON:0000073;3.06e-07;53!UBERON:0002616;3.06e-07;53!UBERON:0007023;4.89e-07;114 | ||
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| ||
|short_description=p1@CENPC1 | |short_description=p1@CENPC1 | ||
}} | }} |
Latest revision as of 06:59, 18 September 2015
Short description: | p1@CENPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CENPC1_5end |
Coexpression cluster: | C867_CD4_CD8_Natural_CD19_Peripheral_cerebellum_Mast |
Association with transcript: | 0bp_to_ENST00000506882, ENST00000510189_5end |
EntrezGene: | CENPC1 |
HGNC: | 1854 |
UniProt: | Q6PIR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.70e-36 | 168 |
hematopoietic oligopotent progenitor cell | 5.83e-33 | 161 |
hematopoietic multipotent progenitor cell | 5.83e-33 | 161 |
hematopoietic cell | 7.90e-32 | 177 |
leukocyte | 3.15e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 1.85e-23 | 120 |
nongranular leukocyte | 1.69e-21 | 115 |
lymphocyte | 2.32e-17 | 53 |
common lymphoid progenitor | 2.32e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.05e-17 | 52 |
myeloid cell | 9.58e-16 | 108 |
common myeloid progenitor | 9.58e-16 | 108 |
mature alpha-beta T cell | 7.61e-11 | 18 |
alpha-beta T cell | 7.61e-11 | 18 |
immature T cell | 7.61e-11 | 18 |
mature T cell | 7.61e-11 | 18 |
immature alpha-beta T cell | 7.61e-11 | 18 |
myeloid leukocyte | 7.70e-10 | 72 |
T cell | 8.38e-10 | 25 |
pro-T cell | 8.38e-10 | 25 |
granulocyte monocyte progenitor cell | 9.59e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.24e-07 | 66 |
B cell | 1.32e-07 | 14 |
CD8-positive, alpha-beta T cell | 2.77e-07 | 11 |
lymphocyte of B lineage | 3.70e-07 | 24 |
pro-B cell | 3.70e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.78e-22 | 114 |
neural tube | 1.93e-12 | 56 |
neural rod | 1.93e-12 | 56 |
future spinal cord | 1.93e-12 | 56 |
neural keel | 1.93e-12 | 56 |
regional part of nervous system | 1.75e-11 | 53 |
regional part of brain | 1.75e-11 | 53 |
regional part of forebrain | 2.51e-11 | 41 |
forebrain | 2.51e-11 | 41 |
anterior neural tube | 2.51e-11 | 41 |
future forebrain | 2.51e-11 | 41 |
hematopoietic system | 8.71e-10 | 98 |
blood island | 8.71e-10 | 98 |
central nervous system | 5.16e-09 | 81 |
brain grey matter | 5.99e-09 | 34 |
gray matter | 5.99e-09 | 34 |
nervous system | 1.18e-08 | 89 |
telencephalon | 1.40e-08 | 34 |
regional part of telencephalon | 1.56e-08 | 32 |
cerebral hemisphere | 3.92e-08 | 32 |
brain | 4.28e-08 | 68 |
future brain | 4.28e-08 | 68 |
hemolymphoid system | 1.30e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.31e-07 | 39 |