FFCP PHASE1:Hg19::chr8:71157595..71157616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10499 | |EntrezGene=10499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7669 | |HGNC=7669 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFN9 | |UniProt=E5RFN9 | ||
|association_with_transcript=0bp_to_ENST00000519724_5end | |association_with_transcript=0bp_to_ENST00000519724_5end | ||
|cluster_id=chr8:71157595..71157616,- | |||
|coexpression_cluster_id=C1938 | |coexpression_cluster_id=C1938 | ||
|description=CAGE_peak_13_at_NCOA2_5end | |description=CAGE_peak_13_at_NCOA2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.09e-18;3!CL:0002251;1.71e-10;20!CL:0002621;7.29e-09;3!CL:0000860;1.05e-07;33!CL:0002057;1.05e-07;33!CL:0002174;1.47e-07;1!CL:0000501;1.47e-07;1!CL:0002336;2.91e-07;1!CL:0002261;2.91e-07;1!CL:0002170;2.91e-07;1!CL:0002159;4.97e-07;14 | |ontology_enrichment_celltype_v019=CL:0002166;1.09e-18;3!CL:0002251;1.71e-10;20!CL:0002621;7.29e-09;3!CL:0000860;1.05e-07;33!CL:0002057;1.05e-07;33!CL:0002174;1.47e-07;1!CL:0000501;1.47e-07;1!CL:0002336;2.91e-07;1!CL:0002261;2.91e-07;1!CL:0002170;2.91e-07;1!CL:0002159;4.97e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.36e-18,3;CL:0002251,2.22e-10,20;CL:0002621,8.92e-09,3;CL:0002174,1.42e-07,1;CL:0000501,1.42e-07,1;CL:0002336,4.90e-07,1;CL:0002261,4.90e-07,1;CL:0002170,4.90e-07,1;CL:0002159,5.31e-07,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;3.09e-11;14 | |ontology_enrichment_disease_v019=DOID:1749;3.09e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.69e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.06e-21!82;UBERON:0005743!1.45e-20!86;UBERON:0000073!4.34e-20!94;UBERON:0001016!4.34e-20!94;UBERON:0000955!2.27e-17!69;UBERON:0006238!2.27e-17!69;UBERON:0002616!1.72e-16!59;UBERON:0002020!2.49e-16!34;UBERON:0003528!2.49e-16!34;UBERON:0001869!3.41e-16!32;UBERON:0001893!5.10e-16!34;UBERON:0002780!7.55e-16!41;UBERON:0001890!7.55e-16!41;UBERON:0006240!7.55e-16!41;UBERON:0003080!2.85e-15!42;UBERON:0002791!3.64e-15!33;UBERON:0001049!4.06e-15!57;UBERON:0005068!4.06e-15!57;UBERON:0006241!4.06e-15!57;UBERON:0007135!4.06e-15!57;UBERON:0000033!1.76e-14!123;UBERON:0000153!1.07e-13!129;UBERON:0007811!1.07e-13!129;UBERON:0004121!5.23e-13!169;UBERON:0000924!2.67e-12!173;UBERON:0006601!2.67e-12!173;UBERON:0003075!8.03e-12!86;UBERON:0007284!8.03e-12!86;UBERON:0002346!8.52e-11!90;UBERON:0003056!1.26e-10!61;UBERON:0000956!6.97e-10!25;UBERON:0000203!6.97e-10!25;UBERON:0002619!2.45e-09!22;UBERON:0001950!3.94e-09!20;UBERON:0002308!1.31e-08!9;UBERON:0000125!1.31e-08!9;UBERON:0002420!8.86e-07!9;UBERON:0007245!8.86e-07!9;UBERON:0010009!8.86e-07!9;UBERON:0010011!8.86e-07!9;UBERON:0000454!8.86e-07!9;UBERON:0009663!9.69e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!4.06e-21!82;UBERON:0005743!1.45e-20!86;UBERON:0000073!4.34e-20!94;UBERON:0001016!4.34e-20!94;UBERON:0000955!2.27e-17!69;UBERON:0006238!2.27e-17!69;UBERON:0002616!1.72e-16!59;UBERON:0002020!2.49e-16!34;UBERON:0003528!2.49e-16!34;UBERON:0001869!3.41e-16!32;UBERON:0001893!5.10e-16!34;UBERON:0002780!7.55e-16!41;UBERON:0001890!7.55e-16!41;UBERON:0006240!7.55e-16!41;UBERON:0003080!2.85e-15!42;UBERON:0002791!3.64e-15!33;UBERON:0001049!4.06e-15!57;UBERON:0005068!4.06e-15!57;UBERON:0006241!4.06e-15!57;UBERON:0007135!4.06e-15!57;UBERON:0000033!1.76e-14!123;UBERON:0000153!1.07e-13!129;UBERON:0007811!1.07e-13!129;UBERON:0004121!5.23e-13!169;UBERON:0000924!2.67e-12!173;UBERON:0006601!2.67e-12!173;UBERON:0003075!8.03e-12!86;UBERON:0007284!8.03e-12!86;UBERON:0002346!8.52e-11!90;UBERON:0003056!1.26e-10!61;UBERON:0000956!6.97e-10!25;UBERON:0000203!6.97e-10!25;UBERON:0002619!2.45e-09!22;UBERON:0001950!3.94e-09!20;UBERON:0002308!1.31e-08!9;UBERON:0000125!1.31e-08!9;UBERON:0002420!8.86e-07!9;UBERON:0007245!8.86e-07!9;UBERON:0010009!8.86e-07!9;UBERON:0010011!8.86e-07!9;UBERON:0000454!8.86e-07!9;UBERON:0009663!9.69e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.68e-14;4!UBERON:0008895;3.68e-14;4!UBERON:0003729;1.13e-11;13!UBERON:0011159;1.96e-11;5!UBERON:0000344;1.71e-10;20!UBERON:0001949;7.29e-09;3!UBERON:0005383;7.29e-09;3!UBERON:0005382;7.29e-09;3!UBERON:0003929;3.49e-08;7!UBERON:0000997;7.50e-08;1!UBERON:0005056;7.50e-08;1!UBERON:0004176;7.50e-08;1!UBERON:0003343;2.01e-07;4!UBERON:0004785;2.01e-07;4!UBERON:0001874;2.91e-07;1!UBERON:0003350;3.23e-07;8!UBERON:0000369;7.48e-07;4!UBERON:0002435;7.48e-07;4!UBERON:0000204;7.48e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001708;3.68e-14;4!UBERON:0008895;3.68e-14;4!UBERON:0003729;1.13e-11;13!UBERON:0011159;1.96e-11;5!UBERON:0000344;1.71e-10;20!UBERON:0001949;7.29e-09;3!UBERON:0005383;7.29e-09;3!UBERON:0005382;7.29e-09;3!UBERON:0003929;3.49e-08;7!UBERON:0000997;7.50e-08;1!UBERON:0005056;7.50e-08;1!UBERON:0004176;7.50e-08;1!UBERON:0003343;2.01e-07;4!UBERON:0004785;2.01e-07;4!UBERON:0001874;2.91e-07;1!UBERON:0003350;3.23e-07;8!UBERON:0000369;7.48e-07;4!UBERON:0002435;7.48e-07;4!UBERON:0000204;7.48e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.32e-14,4;UBERON:0008895,4.32e-14,4;UBERON:0003729,1.51e-11,13;UBERON:0011159,2.23e-11,5;UBERON:0000344,2.22e-10,20;UBERON:0010188,1.45e-09,6;UBERON:0002539,1.45e-09,6;UBERON:0008816,1.45e-09,6;UBERON:0005383,4.68e-09,3;UBERON:0005382,4.68e-09,3;UBERON:0001949,8.92e-09,3;UBERON:0000997,8.00e-08,1;UBERON:0005056,8.00e-08,1;UBERON:0003343,1.95e-07,4;UBERON:0004785,1.95e-07,4;UBERON:0001874,2.35e-07,1;UBERON:0003350,3.81e-07,8;UBERON:0000369,5.38e-07,4;UBERON:0002435,5.38e-07,4;UBERON:0000204,5.38e-07,4;UBERON:0010082,5.38e-07,4 | |||
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| ||
|short_description=p13@NCOA2 | |short_description=p13@NCOA2 | ||
}} | }} |
Latest revision as of 00:06, 19 September 2015
Short description: | p13@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NCOA2_5end |
Coexpression cluster: | C1938_malignant_epidermoid_prostate_oral_large_anaplastic_ductal |
Association with transcript: | 0bp_to_ENST00000519724_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | E5RFN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.36e-18 | 3 |
epithelial cell of alimentary canal | 2.22e-10 | 20 |
gingival epithelial cell | 8.92e-09 | 3 |
follicular cell of ovary | 1.42e-07 | 1 |
granulosa cell | 1.42e-07 | 1 |
buccal mucosa cell | 4.90e-07 | 1 |
endothelial cell of viscerocranial mucosa | 4.90e-07 | 1 |
keratinized cell of the oral mucosa | 4.90e-07 | 1 |
general ecto-epithelial cell | 5.31e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.32e-14 | 4 |
splanchnocranium | 4.32e-14 | 4 |
mouth mucosa | 1.51e-11 | 13 |
primary subdivision of cranial skeletal system | 2.23e-11 | 5 |
mucosa | 2.22e-10 | 20 |
protuberance | 1.45e-09 | 6 |
pharyngeal arch | 1.45e-09 | 6 |
embryonic head | 1.45e-09 | 6 |
caudate-putamen | 4.68e-09 | 3 |
dorsal striatum | 4.68e-09 | 3 |
gingival epithelium | 8.92e-09 | 3 |
mammalian vulva | 8.00e-08 | 1 |
external female genitalia | 8.00e-08 | 1 |
mucosa of oral region | 1.95e-07 | 4 |
respiratory system mucosa | 1.95e-07 | 4 |
putamen | 2.35e-07 | 1 |
epithelium of mucosa | 3.81e-07 | 8 |
corpus striatum | 5.38e-07 | 4 |
striatum | 5.38e-07 | 4 |
ventral part of telencephalon | 5.38e-07 | 4 |
future corpus striatum | 5.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.69e-11 | 14 |