FFCP PHASE1:Hg19::chr1:3569135..3569150,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:3569135..3569150,+
|short_description=p3@TP73
|description=CAGE_peak_3_at_TP73_5end
|association_with_transcript=6bp_to_ENST00000346387,ENST00000354437,ENS...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7161 | |EntrezGene=7161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |HGNC=12003 | ||
|TSSclassifier=strong | |||
|UniProt=C9J521,O15350 | |UniProt=C9J521,O15350 | ||
|association_with_transcript=6bp_to_ENST00000346387,ENST00000354437,ENST00000357733,NM_001204184,NM_001204185,NM_001204186,NM_001204187,NM_001204188,NM_005427,uc001akp.2,uc001akq.2_5end | |||
|cluster_id=chr1:3569135..3569150,+ | |||
|coexpression_cluster_id=C1477 | |||
|description=CAGE_peak_3_at_TP73_5end | |||
|id=chr1:3569135..3569150,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.05e-07!24;CL:0000826!1.05e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.10e-09;2!CL:0000242;1.10e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.20e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.22e-35!239;DOID:162!3.01e-35!235;DOID:0050687!1.54e-24!143;DOID:305!1.55e-21!106;DOID:0050686!3.53e-17!137;DOID:7!3.59e-10!39;DOID:0060058!4.19e-09!10;DOID:299!3.05e-08!25;DOID:2531!1.61e-07!51;DOID:0060083!1.61e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.90e-10;4!DOID:1612;2.90e-10;4!DOID:4362;4.54e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.60e-15,235;DOID:14566,4.90e-15,239;DOID:5093,2.48e-10,4;DOID:1612,2.48e-10,4;DOID:0050687,3.58e-09,143;DOID:0050686,1.01e-08,137;DOID:4362,5.82e-08,5;DOID:305,1.08e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001041!3.92e-08!98;UBERON:0004921!5.84e-08!129;UBERON:0004185!5.84e-08!129;UBERON:0000077!4.52e-07!130;UBERON:0000344!4.96e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.00e-07;10!UBERON:0000002;8.56e-07;6!UBERON:0001560;8.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.86e-07,10;UBERON:0000358,1.86e-07,10;UBERON:0000307,1.86e-07,10;UBERON:0000091,1.86e-07,10;UBERON:0000087,1.86e-07,10;UBERON:0007010,1.86e-07,10;UBERON:0007806,1.86e-07,10;UBERON:0008780,1.86e-07,10;UBERON:0005728,1.86e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79416738629103,6.73224833489555,6.4542840677217,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.47024129588619,0,0,0,0,0,0.383010740264733,0,0,0,0,0,2.50634477090067,0.846458889008016,1.4452926759333,0.201799707191048,3.40676990152261,0,0.921722292925374,0.894704431569664,1.66849141711908,0,3.06246791284767,0,0,0,0,1.30998378285754,0,0.606802608747567,2.11742430127209,0,0,0,0,0,0,0,0.329607748453519,0.63337622438398,0,0,1.0077309914171,0.818149460017238,3.93871377475422,0,0.539210106883961,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.260427761085233,2.0115799999125,0,0,0,0.236387681767936,1.37897349296586,0,7.29224978719828,0,0,1.52581736317083,0.995213339381022,0,0,0,1.39423744278603,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,5.93042257361244,4.81899361891361,4.80340967725095,0.067401132980677,0,0,0.547364367646998,0.782658475728359,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0.622129148383483,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,1.75996244461323,0,0,0.19980960958213,0.72045208577053,0.916292769327325,0,0.14405479798815,0.248505071130865,3.29971648463514,0.407712618220842,0.209205692624666,0.509991088181609,0,0,0,0,0,21.0309883423452,0,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0.157566364614447,0.329663433524666,0.337017719270924,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,3.16178611036711,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.968440444553616,0.124980407962107,0,0,0,1.40500471742064,4.49255188693558,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,1.21543982470953,0,0,0,0,0.982829546539238,0,1.47918486351039,4.59971010466339,0.320075189082423,0,0,0,0,0,0.383683113910955,1.1860729253635,0.157265941855896,0,0,0.425149840203366,0.991486114072017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.353909170043221,0.366857197043358,0.462102664601353,0,0.690359926060101,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,5.80375106386748,0.383287282918786,0,0,0,0,0,0.806637912890455,0.342976018874837,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,2.3702041759909,0,1.56472445072321,0,0,0.51215543128185,0.691259661814092,0.430227358820278,0.118332000730565,0.255640214277473,0,0.4582137370881,0,0,0.782988022584546,0,0.121917924982269,0,0,0,0,2.33939463462106,0.596852325484105,0.118920090777569,0.45178432815584,0.109940516745429,3.17021971490014,0,0,1.88126918544609,0,2.12108892391463,0,0,0,0,0.281951753939561,0,4.69723432847166,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.186224142887574,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,3.58174381888288,0,0,0.628776414746108,2.34640942403454,0,0,0,0,3.20568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79416738629103,6.73224833489555,6.4542840677217,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.47024129588619,0,0,0,0,0,0.383010740264733,0,0,0,0,0,2.50634477090067,0.846458889008016,1.4452926759333,0.201799707191048,3.40676990152261,0,0.921722292925374,0.894704431569664,1.66849141711908,0,3.06246791284767,0,0,0,0,1.30998378285754,0,0.606802608747567,2.11742430127209,0,0,0,0,0,0,0,0.329607748453519,0.63337622438398,0,0,1.0077309914171,0.818149460017238,3.93871377475422,0,0.539210106883961,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.260427761085233,2.0115799999125,0,0,0,0.236387681767936,1.37897349296586,0,7.29224978719828,0,0,1.52581736317083,0.995213339381022,0,0,0,1.39423744278603,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,5.93042257361244,4.81899361891361,4.80340967725095,0.067401132980677,0,0,0.547364367646998,0.782658475728359,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0.622129148383483,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,1.75996244461323,0,0,0.19980960958213,0.72045208577053,0.916292769327325,0,0.14405479798815,0.248505071130865,3.29971648463514,0.407712618220842,0.209205692624666,0.509991088181609,0,0,0,0,0,21.0309883423452,0,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0.157566364614447,0.329663433524666,0.337017719270924,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,3.16178611036711,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.968440444553616,0.124980407962107,0,0,0,1.40500471742064,4.49255188693558,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,1.21543982470953,0,0,0,0,0.982829546539238,0,1.47918486351039,4.59971010466339,0.320075189082423,0,0,0,0,0,0.383683113910955,1.1860729253635,0.157265941855896,0,0,0.425149840203366,0.991486114072017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.353909170043221,0.366857197043358,0.462102664601353,0,0.690359926060101,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,5.80375106386748,0.383287282918786,0,0,0,0,0,0.806637912890455,0.342976018874837,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,2.3702041759909,0,1.56472445072321,0,0,0.51215543128185,0.691259661814092,0.430227358820278,0.118332000730565,0.255640214277473,0,0.4582137370881,0,0,0.782988022584546,0,0.121917924982269,0,0,0,0,2.33939463462106,0.596852325484105,0.118920090777569,0.45178432815584,0.109940516745429,3.17021971490014,0,0,1.88126918544609,0,2.12108892391463,0,0,0,0,0.281951753939561,0,4.69723432847166,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.186224142887574,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,3.58174381888288,0,0,0.628776414746108,2.34640942403454,0,0,0,0,3.20568492303233 | ||
|short_description=p3@TP73 | |||
}} | }} |
Latest revision as of 18:36, 17 September 2015
Short description: | p3@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TP73_5end |
Coexpression cluster: | C1477_hairy_acute_B_carcinosarcoma_merkel_peripheral_b |
Association with transcript: | 6bp_to_ENST00000346387, ENST00000354437, ENST00000357733, NM_001204184, NM_001204185, NM_001204186, NM_001204187, NM_001204188, NM_005427, uc001akp.2, uc001akq.2_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | C9J521O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.20e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.86e-07 | 10 |
blastocyst | 1.86e-07 | 10 |
blastula | 1.86e-07 | 10 |
bilaminar disc | 1.86e-07 | 10 |
inner cell mass | 1.86e-07 | 10 |
cleaving embryo | 1.86e-07 | 10 |
connecting stalk | 1.86e-07 | 10 |
inner cell mass derived epiblast | 1.86e-07 | 10 |
extraembryonic mesoderm | 1.86e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.60e-15 | 235 |
disease of cellular proliferation | 4.90e-15 | 239 |
thoracic cancer | 2.48e-10 | 4 |
breast cancer | 2.48e-10 | 4 |
cell type cancer | 3.58e-09 | 143 |
organ system cancer | 1.01e-08 | 137 |
cervical cancer | 5.82e-08 | 5 |
carcinoma | 1.08e-07 | 106 |