FFCP PHASE1:Hg19::chr8:93029879..93029904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=Q06455,Q7Z4J5 | |UniProt=Q06455,Q7Z4J5 | ||
|association_with_transcript=3bp_to_NM_175636,uc003yfb.1,uc003yff.1,uc003yfg.1_5end | |association_with_transcript=3bp_to_NM_175636,uc003yfb.1,uc003yff.1,uc003yfg.1_5end | ||
|cluster_id=chr8:93029879..93029904,- | |||
|coexpression_cluster_id=C210 | |coexpression_cluster_id=C210 | ||
|description=CAGE_peak_30_at_RUNX1T1_5end | |description=CAGE_peak_30_at_RUNX1T1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1 | |ontology_enrichment_celltype_v019=CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.79e-26,1;CL:0000785,1.37e-13,2;CL:0000955,1.37e-13,2;CL:0000818,1.37e-13,2;CL:0000954,1.37e-13,2;CL:0000816,1.37e-13,2;CL:0000817,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.00e-50;2!UBERON:0006222;7.62e-26;1!CL:0000954;1.21e-13;2 | |ontology_enrichment_development_v019=UBERON:0010122;4.00e-50;2!UBERON:0006222;7.62e-26;1!CL:0000954;1.21e-13;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:0060058;5.98e-11;10 | |ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:0060058;5.98e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.79e-26,1;DOID:8675,9.79e-26,1;DOID:0060058,6.28e-11,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;1.77e-98;4!UBERON:0002435;1.77e-98;4!UBERON:0000204;1.77e-98;4!UBERON:0009663;1.05e-87;7!UBERON:0005383;1.66e-74;3!UBERON:0005382;1.66e-74;3!UBERON:0002420;2.29e-68;9!UBERON:0000125;2.29e-68;9!UBERON:0007245;2.29e-68;9!UBERON:0002308;2.29e-68;9!UBERON:0010009;2.29e-68;9!UBERON:0010011;2.29e-68;9!UBERON:0000454;2.29e-68;9!UBERON:0001873;4.00e-50;2!UBERON:0001874;2.78e-26;1!UBERON:0001882;7.62e-26;1!UBERON:0005403;7.62e-26;1!UBERON:0002791;2.03e-19;32!UBERON:0001869;3.88e-18;32!UBERON:0003528;5.61e-18;34!UBERON:0002020;5.61e-18;34!UBERON:0002780;5.41e-17;41!UBERON:0001890;5.41e-17;41!UBERON:0001893;5.46e-16;34!UBERON:0001875;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0000955;4.88e-11;68!UBERON:0000073;5.14e-10;53!UBERON:0002616;5.14e-10;53!UBERON:0001017;2.65e-09;75 | |ontology_enrichment_uberon_v019=UBERON:0000369;1.77e-98;4!UBERON:0002435;1.77e-98;4!UBERON:0000204;1.77e-98;4!UBERON:0009663;1.05e-87;7!UBERON:0005383;1.66e-74;3!UBERON:0005382;1.66e-74;3!UBERON:0002420;2.29e-68;9!UBERON:0000125;2.29e-68;9!UBERON:0007245;2.29e-68;9!UBERON:0002308;2.29e-68;9!UBERON:0010009;2.29e-68;9!UBERON:0010011;2.29e-68;9!UBERON:0000454;2.29e-68;9!UBERON:0001873;4.00e-50;2!UBERON:0001874;2.78e-26;1!UBERON:0001882;7.62e-26;1!UBERON:0005403;7.62e-26;1!UBERON:0002791;2.03e-19;32!UBERON:0001869;3.88e-18;32!UBERON:0003528;5.61e-18;34!UBERON:0002020;5.61e-18;34!UBERON:0002780;5.41e-17;41!UBERON:0001890;5.41e-17;41!UBERON:0001893;5.46e-16;34!UBERON:0001875;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0000955;4.88e-11;68!UBERON:0000073;5.14e-10;53!UBERON:0002616;5.14e-10;53!UBERON:0001017;2.65e-09;75 | ||
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|short_description=p30@RUNX1T1 | |short_description=p30@RUNX1T1 | ||
}} | }} |
Latest revision as of 11:41, 19 September 2015
Short description: | p30@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_RUNX1T1_5end |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | 3bp_to_NM_175636, uc003yfb.1, uc003yff.1, uc003yfg.1_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | Q06455Q7Z4J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.79e-26 | 1 |
mature B cell | 1.37e-13 | 2 |
pre-B-II cell | 1.37e-13 | 2 |
transitional stage B cell | 1.37e-13 | 2 |
small pre-B-II cell | 1.37e-13 | 2 |
immature B cell | 1.37e-13 | 2 |
precursor B cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.79e-26 | 1 |
lymphosarcoma | 9.79e-26 | 1 |
lymphoma | 6.28e-11 | 10 |