FFCP PHASE1:Hg19::chr16:56643233..56643256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56643233..56643256,+ | |||
|coexpression_cluster_id=C3573 | |coexpression_cluster_id=C3573 | ||
|description=CAGE_peak_at_chr16:56643233..56643256,+ | |description=CAGE_peak_at_chr16:56643233..56643256,+ | ||
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|ontology_enrichment_celltype=CL:0000222!6.17e-18!119;CL:0000220!5.71e-17!246;CL:0002321!1.64e-16!248;CL:0000066!1.86e-10!254;CL:0000680!1.38e-09!57;CL:0000056!1.38e-09!57;CL:0000355!1.38e-09!57;CL:0000183!1.43e-09!59;CL:0000055!1.43e-09!180;CL:0002078!9.93e-09!44;CL:0000213!2.87e-08!57;CL:0000215!2.87e-08!57;CL:0002368!3.00e-08!13;CL:0000187!3.34e-08!54;CL:0000115!6.02e-08!35;CL:0000548!1.21e-07!679;CL:0000004!1.21e-07!679;CL:0000255!1.21e-07!679;CL:1000449!1.45e-07!16;CL:0002139!1.52e-07!24;CL:0002371!2.53e-07!591;CL:0000012!4.19e-07!682;CL:0002681!5.41e-07!13;CL:0002584!5.41e-07!13;CL:0002202!5.43e-07!9;CL:0002632!5.43e-07!9;CL:0000359!6.03e-07!32;CL:0000144!7.15e-07!625 | |ontology_enrichment_celltype=CL:0000222!6.17e-18!119;CL:0000220!5.71e-17!246;CL:0002321!1.64e-16!248;CL:0000066!1.86e-10!254;CL:0000680!1.38e-09!57;CL:0000056!1.38e-09!57;CL:0000355!1.38e-09!57;CL:0000183!1.43e-09!59;CL:0000055!1.43e-09!180;CL:0002078!9.93e-09!44;CL:0000213!2.87e-08!57;CL:0000215!2.87e-08!57;CL:0002368!3.00e-08!13;CL:0000187!3.34e-08!54;CL:0000115!6.02e-08!35;CL:0000548!1.21e-07!679;CL:0000004!1.21e-07!679;CL:0000255!1.21e-07!679;CL:1000449!1.45e-07!16;CL:0002139!1.52e-07!24;CL:0002371!2.53e-07!591;CL:0000012!4.19e-07!682;CL:0002681!5.41e-07!13;CL:0002584!5.41e-07!13;CL:0002202!5.43e-07!9;CL:0002632!5.43e-07!9;CL:0000359!6.03e-07!32;CL:0000144!7.15e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.48e-11;13!CL:0002681;6.94e-10;12!CL:0002584;6.94e-10;12!CL:0002202;7.41e-10;9!CL:0002632;7.41e-10;9!CL:1000449;9.76e-09;15!CL:1000497;3.06e-07;17!CL:0002518;3.06e-07;17!CL:0000115;3.49e-07;36!CL:1000746;8.66e-07;7!CL:1000612;8.66e-07;7 | |ontology_enrichment_celltype_v019=CL:0002368;2.48e-11;13!CL:0002681;6.94e-10;12!CL:0002584;6.94e-10;12!CL:0002202;7.41e-10;9!CL:0002632;7.41e-10;9!CL:1000449;9.76e-09;15!CL:1000497;3.06e-07;17!CL:0002518;3.06e-07;17!CL:0000115;3.49e-07;36!CL:1000746;8.66e-07;7!CL:1000612;8.66e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.42e-16,121;CL:0002321,4.35e-16,250;CL:0002368,8.48e-12,13;CL:0002202,7.03e-10,9;CL:0002632,7.03e-10,9;CL:0002681,7.81e-10,12;CL:0002584,7.81e-10,12;CL:1000449,1.08e-08,15;CL:0000680,1.28e-08,58;CL:0000056,1.28e-08,58;CL:0000355,1.28e-08,58;CL:0000213,7.26e-08,58;CL:0000215,7.26e-08,58;CL:0002078,7.43e-08,45;CL:0000115,1.05e-07,36;CL:0000066,1.30e-07,253;CL:1000497,3.32e-07,17;CL:0002518,3.32e-07,17;CL:0000187,6.15e-07,55;CL:0002076,6.37e-07,42;CL:1000746,8.08e-07,7;CL:1000612,8.08e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.44e-20!312;UBERON:0000483!6.83e-19!309;UBERON:0000477!2.50e-16!286;UBERON:0005256!3.02e-15!143;UBERON:0000486!2.22e-14!82;UBERON:0003914!2.65e-14!118;UBERON:0002049!2.83e-14!79;UBERON:0007798!2.83e-14!79;UBERON:0000914!1.19e-13!83;UBERON:0002329!1.19e-13!83;UBERON:0003077!1.19e-13!83;UBERON:0003059!1.19e-13!83;UBERON:0007282!1.19e-13!83;UBERON:0009618!1.19e-13!83;UBERON:0007285!1.19e-13!83;UBERON:0002100!1.34e-13!216;UBERON:0000475!1.48e-13!365;UBERON:0000481!5.28e-13!347;UBERON:0004111!1.60e-12!241;UBERON:0000490!6.51e-12!138;UBERON:0000055!8.65e-12!69;UBERON:0004290!1.55e-11!70;UBERON:0000025!1.85e-10!194;UBERON:0003104!2.33e-10!238;UBERON:0009142!2.33e-10!238;UBERON:0001981!8.82e-10!60;UBERON:0007500!8.82e-10!60;UBERON:0004537!8.82e-10!60;UBERON:0006965!8.82e-10!60;UBERON:0001637!3.05e-09!42;UBERON:0003509!3.05e-09!42;UBERON:0004572!3.05e-09!42;UBERON:0001134!4.44e-09!61;UBERON:0002036!4.44e-09!61;UBERON:0003082!4.44e-09!61;UBERON:0001009!6.16e-09!113;UBERON:0004535!7.18e-09!110;UBERON:0000467!2.40e-08!625;UBERON:0000480!3.65e-08!626;UBERON:0002385!3.78e-08!63;UBERON:0001015!3.78e-08!63;UBERON:0000383!3.78e-08!63;UBERON:0002050!7.68e-08!605;UBERON:0005423!7.68e-08!605;UBERON:0000923!8.70e-08!604;UBERON:0005291!8.70e-08!604;UBERON:0006598!8.70e-08!604;UBERON:0002532!8.70e-08!604;UBERON:0004573!9.70e-08!33;UBERON:0004571!9.70e-08!33;UBERON:0004211!1.45e-07!16;UBERON:0001285!1.45e-07!16;UBERON:0007684!1.45e-07!16;UBERON:0003220!1.45e-07!16;UBERON:0004208!1.45e-07!16;UBERON:0000468!1.59e-07!659;UBERON:0006555!2.58e-07!17;UBERON:0005103!2.58e-07!17;UBERON:0000083!2.58e-07!17;UBERON:0009201!2.58e-07!17;UBERON:0004819!2.58e-07!17;UBERON:0006553!2.58e-07!17;UBERON:0003074!2.58e-07!17;UBERON:0003060!2.58e-07!17;UBERON:0000922!4.53e-07!612;UBERON:0001225!5.41e-07!13;UBERON:0008987!5.41e-07!13;UBERON:0004872!7.35e-07!84 | |ontology_enrichment_uberon=UBERON:0000119!5.44e-20!312;UBERON:0000483!6.83e-19!309;UBERON:0000477!2.50e-16!286;UBERON:0005256!3.02e-15!143;UBERON:0000486!2.22e-14!82;UBERON:0003914!2.65e-14!118;UBERON:0002049!2.83e-14!79;UBERON:0007798!2.83e-14!79;UBERON:0000914!1.19e-13!83;UBERON:0002329!1.19e-13!83;UBERON:0003077!1.19e-13!83;UBERON:0003059!1.19e-13!83;UBERON:0007282!1.19e-13!83;UBERON:0009618!1.19e-13!83;UBERON:0007285!1.19e-13!83;UBERON:0002100!1.34e-13!216;UBERON:0000475!1.48e-13!365;UBERON:0000481!5.28e-13!347;UBERON:0004111!1.60e-12!241;UBERON:0000490!6.51e-12!138;UBERON:0000055!8.65e-12!69;UBERON:0004290!1.55e-11!70;UBERON:0000025!1.85e-10!194;UBERON:0003104!2.33e-10!238;UBERON:0009142!2.33e-10!238;UBERON:0001981!8.82e-10!60;UBERON:0007500!8.82e-10!60;UBERON:0004537!8.82e-10!60;UBERON:0006965!8.82e-10!60;UBERON:0001637!3.05e-09!42;UBERON:0003509!3.05e-09!42;UBERON:0004572!3.05e-09!42;UBERON:0001134!4.44e-09!61;UBERON:0002036!4.44e-09!61;UBERON:0003082!4.44e-09!61;UBERON:0001009!6.16e-09!113;UBERON:0004535!7.18e-09!110;UBERON:0000467!2.40e-08!625;UBERON:0000480!3.65e-08!626;UBERON:0002385!3.78e-08!63;UBERON:0001015!3.78e-08!63;UBERON:0000383!3.78e-08!63;UBERON:0002050!7.68e-08!605;UBERON:0005423!7.68e-08!605;UBERON:0000923!8.70e-08!604;UBERON:0005291!8.70e-08!604;UBERON:0006598!8.70e-08!604;UBERON:0002532!8.70e-08!604;UBERON:0004573!9.70e-08!33;UBERON:0004571!9.70e-08!33;UBERON:0004211!1.45e-07!16;UBERON:0001285!1.45e-07!16;UBERON:0007684!1.45e-07!16;UBERON:0003220!1.45e-07!16;UBERON:0004208!1.45e-07!16;UBERON:0000468!1.59e-07!659;UBERON:0006555!2.58e-07!17;UBERON:0005103!2.58e-07!17;UBERON:0000083!2.58e-07!17;UBERON:0009201!2.58e-07!17;UBERON:0004819!2.58e-07!17;UBERON:0006553!2.58e-07!17;UBERON:0003074!2.58e-07!17;UBERON:0003060!2.58e-07!17;UBERON:0000922!4.53e-07!612;UBERON:0001225!5.41e-07!13;UBERON:0008987!5.41e-07!13;UBERON:0004872!7.35e-07!84 | ||
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|phase1_expression=2.90685406832891,1.92690471501885,1.26858963686374,3.00219895059391,0.893922188854576,0,2.53299878168311,5.05375898741465,0.522371256399677,2.94880723801811,13.2582221914761,0.218441372130172,0,0.74259811776028,1.32558950291166,0.672325146451775,1.80808358407193,2.19093027116212,0,1.35433163884467,5.71201935483908,0.313454721478088,0,0.136874425072884,0.502170558379211,0,0.0821005894499457,0.236132343941038,0,0,0.154816123316076,8.27479102031034,17.1687373703603,9.61360426433648,0,0.142169232487422,0,0,0,0.434021741431704,0,0,0.515151135268373,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,1.34140171940727,0.255725123687061,1.0843174571537,0.50133791063589,0.289693037921647,1.5905718941022,0.973269740605272,0.189069634328136,2.4390233720882,1.75669571386252,0,0.364295288292542,2.96627554227544,0,0,0,0,0,0,0.993812036833525,1.72046919021225,1.04142150482278,3.39184765154406,2.51699661725944,1.10047216776027,5.22487416342026,0.516833518338658,1.06729878806013,1.33888245105868,0.805658634218294,3.04108842287405,0.488124115096339,1.47065232138347,1.62028389576352,0.714397826272638,0.673588117878509,1.0135033243499,1.53316637465883,0.949265659568129,2.19842092716489,0,0,3.48875241714027,0.496971951695318,0.506522046658319,0.264818361626438,0,1.77334191099179,0,0,3.45334567784024,0.311211035399766,1.48181739276657,1.30769522490767,0.454072282934794,1.72852777344,0,3.74592092196385,3.4228309292667,11.9558944441441,1.76151747965647,1.78060238804945,3.79217178096071,1.42907919878425,1.22834317311768,2.58314452939414,0,0.494533858557114,4.55080680969013,2.15585442544872,0.841680569770331,0.625592599359821,6.64953877162039,0.877955241761676,0.612975591598039,1.05166641234618,0.226864366320042,0.538168907066586,0.213557388818567,0.423863802319124,0,0.412210116953756,0.515281080091258,0,0.168776332241266,0.389748020644795,0,0.0920498986422993,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,4.05847791642923,8.18238361772504,7.4569194801141,0.121973706129595,0,0,0.10366105501537,0,0,4.69348596989448,0,1.38134921352481,1.85747171212792,0.721879481669586,0.354920400119532,0.337169380156203,0.723033089650446,0.55146986366197,0.653638332277218,1.42362371466658,0.539325232640658,0.784885860501384,2.30848294167834,0.738155454624648,0,0.4115740113314,1.47008711385542,6.33775174109154,4.91413608338813,6.49868897349544,0,0,3.25978839567199,3.07300799144152,0,9.95236826875145,1.11106134190236,0.325808305310325,5.19967392639789,4.3299402607582,0,0.469634776943287,6.6408565970094,9.25971025153221,2.09279567458058,0,0,0,0.702012795417713,0.594524649154913,0.93733833986777,0.671928512795438,1.27597587518148,1.16426079513703,1.45316969256981,11.5014803749563,0.492663237895943,0.264145302039678,0,0.432359860250884,0,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0,0,2.24262168690721,6.10344096366592,2.3468251462704,2.71470603091333,3.57656445851882,5.917119267892,0.26593811658487,2.08014873822732,1.80045161983499,11.3479305618623,7.45982101245078,1.14382394926518,1.08524321078289,0.823240336780769,1.30294473717494,0,3.95975936466715,0.602878754119172,0,2.39935178836937,0,0,0,0,0,2.85273810081437,4.77778312003011,7.3971476118138,7.34149949283572,0.336255431980582,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,5.50187573165645,0.542530047399471,2.07970861530807,1.07057393278297,0.630809660135739,2.10854546986884,1.50473049863859,2.27407504055985,6.2083842775503,0.664225598535437,2.02806085395873,0.173767228936166,1.17480694477644,0.686286847621712,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0,0.280660094433074,0.384417447767103,1.02341449813341,3.69964018630297,0,2.7757744884478,4.26148140751505,2.05317890034523,2.07701771673448,7.32125384297743,0,5.81468763879526,1.28913384510255,0.574072240823034,1.63882051206045,0.655622074797121,1.35359883872224,3.23464415838542,0.784349769176855,4.38417673959782,0.73886140225013,2.27466768141793,6.97384191633714,4.31831832204279,3.08454505380579,1.62567862526312,2.50844886927427,1.52925763827023,4.15538004464362,4.25362033972139,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0.0915694648183434,0.082509499920588,0.574265537996172,1.95018073810956,0,0.193341436584244,8.16457670707615,6.90766536267583,8.82154063900996,0.859361958946189,1.74020032697074,6.13631717395926,0,2.80984356113663,1.92190067365106,1.91419068741876,1.51736671283325,1.85938219718914,1.88887408098384,3.485186350803,0.308033580176089,2.66153015158511,7.82939692867565,0.74129687641568,1.28812398067792,0.744316738719335,0.949138274156178,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| ||
|short_description=p@chr16:56643233..56643256,+ | |short_description=p@chr16:56643233..56643256,+ | ||
}} | }} |
Latest revision as of 10:17, 25 July 2015
Short description: | p@chr16:56643233..56643256, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56643233..56643256, + |
Coexpression cluster: | C3573_liver_Bronchial_Mesenchymal_Fibroblast_Tracheal_Keratinocyte_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.42e-16 | 121 |
embryonic cell | 4.35e-16 | 250 |
respiratory epithelial cell | 8.48e-12 | 13 |
epithelial cell of tracheobronchial tree | 7.03e-10 | 9 |
epithelial cell of lower respiratory tract | 7.03e-10 | 9 |
kidney cortical cell | 7.81e-10 | 12 |
renal cortical epithelial cell | 7.81e-10 | 12 |
epithelial cell of nephron | 1.08e-08 | 15 |
muscle precursor cell | 1.28e-08 | 58 |
myoblast | 1.28e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-08 | 58 |
lining cell | 7.26e-08 | 58 |
barrier cell | 7.26e-08 | 58 |
meso-epithelial cell | 7.43e-08 | 45 |
endothelial cell | 1.05e-07 | 36 |
epithelial cell | 1.30e-07 | 253 |
kidney cell | 3.32e-07 | 17 |
kidney epithelial cell | 3.32e-07 | 17 |
muscle cell | 6.15e-07 | 55 |
endo-epithelial cell | 6.37e-07 | 42 |
glomerular cell | 8.08e-07 | 7 |
kidney corpuscule cell | 8.08e-07 | 7 |