FFCP PHASE1:Hg19::chr17:65554150..65554155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:65554150..65554155,- | |||
|coexpression_cluster_id=C2249 | |coexpression_cluster_id=C2249 | ||
|description=CAGE_peak_at_chr17:65554150..65554155,- | |description=CAGE_peak_at_chr17:65554150..65554155,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000569!2.70e-27!4;CL:0000011!2.70e-27!4;CL:0002582!2.47e-10!3;CL:0002494!5.85e-07!16 | |ontology_enrichment_celltype=CL:0000569!2.70e-27!4;CL:0000011!2.70e-27!4;CL:0002582!2.47e-10!3;CL:0002494!5.85e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002540;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0002540;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002540,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | |ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | ||
|ontology_enrichment_disease=DOID:2394!3.34e-31!14;DOID:120!1.19e-15!27;DOID:193!1.71e-14!29 | |ontology_enrichment_disease=DOID:2394!3.34e-31!14;DOID:120!1.19e-15!27;DOID:193!1.71e-14!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.77e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;1.77e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002118!5.25e-23!5;UBERON:0004532!5.25e-23!5;UBERON:0000992!5.12e-19!13;UBERON:0000991!1.40e-11!21;UBERON:0009196!1.40e-11!21;UBERON:0009117!1.40e-11!21;UBERON:0005564!1.40e-11!21;UBERON:0004176!4.96e-11!22;UBERON:0000941!1.22e-08!1;UBERON:0004904!1.22e-08!1;UBERON:0002464!1.22e-08!1;UBERON:0001021!1.22e-08!1;UBERON:0001785!1.22e-08!1;UBERON:0002119!7.70e-08!4;UBERON:0004531!7.70e-08!4 | |ontology_enrichment_uberon=UBERON:0002118!5.25e-23!5;UBERON:0004532!5.25e-23!5;UBERON:0000992!5.12e-19!13;UBERON:0000991!1.40e-11!21;UBERON:0009196!1.40e-11!21;UBERON:0009117!1.40e-11!21;UBERON:0005564!1.40e-11!21;UBERON:0004176!4.96e-11!22;UBERON:0000941!1.22e-08!1;UBERON:0004904!1.22e-08!1;UBERON:0002464!1.22e-08!1;UBERON:0001021!1.22e-08!1;UBERON:0001785!1.22e-08!1;UBERON:0002119!7.70e-08!4;UBERON:0004531!7.70e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0001905;9.86e-18;2!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0002757;9.86e-18;2!UBERON:0010134;9.86e-18;2!UBERON:0005408;9.86e-18;2!UBERON:0001899;9.86e-18;2!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0002784;1.50e-09;4!UBERON:0002118;5.35e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0001905;9.86e-18;2!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0002757;9.86e-18;2!UBERON:0010134;9.86e-18;2!UBERON:0005408;9.86e-18;2!UBERON:0001899;9.86e-18;2!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0002784;1.50e-09;4!UBERON:0002118;5.35e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0001781,1.44e-09,4;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0002118,5.35e-08,5;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p@chr17:65554150..65554155,- | |short_description=p@chr17:65554150..65554155,- | ||
}} | }} |
Latest revision as of 20:07, 25 July 2015
Short description: | p@chr17:65554150..65554155, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:65554150..65554155, - |
Coexpression cluster: | C2249_mesenchymal_Mesenchymal_anaplastic_mature_Fibroblast_Smooth_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
neural tissue | 9.07e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
layer of retina | 1.44e-09 | 4 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
right ovary | 5.35e-08 | 5 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.64e-10 | 14 |