FFCP PHASE1:Hg19::chr18:3450161..3450183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1J9,Q15583 | |UniProt=F8W1J9,Q15583 | ||
|association_with_transcript=0bp_to_ENST00000551402,NM_003244,uc002kly.2,uc010dkm.1_5end | |association_with_transcript=0bp_to_ENST00000551402,NM_003244,uc002kly.2,uc010dkm.1_5end | ||
|cluster_id=chr18:3450161..3450183,+ | |||
|description=CAGE_peak_1_at_TGIF1_5end | |description=CAGE_peak_1_at_TGIF1_5end | ||
|id=chr18:3450161..3450183,+ | |id=chr18:3450161..3450183,+ | ||
|ontology_enrichment_celltype=CL:0000012!2.06e-31!682;CL:0000548!2.14e-31!679;CL:0000004!2.14e-31!679;CL:0000255!2.14e-31!679;CL:0000066!2.64e-28!254;CL:0000063!1.19e-22!578;CL:0000003!3.04e-20!722;CL:0000144!1.63e-17!625;CL:0002371!3.30e-13!591;CL:0002321!1.55e-11!248;CL:0000220!6.64e-11!246;CL:0000860!4.31e-09!45;CL:0002057!5.89e-09!42;CL:0000223!1.39e-07!59;CL:0002076!1.67e-07!43 | |ontology_enrichment_celltype=CL:0000012!2.06e-31!682;CL:0000548!2.14e-31!679;CL:0000004!2.14e-31!679;CL:0000255!2.14e-31!679;CL:0000066!2.64e-28!254;CL:0000063!1.19e-22!578;CL:0000003!3.04e-20!722;CL:0000144!1.63e-17!625;CL:0002371!3.30e-13!591;CL:0002321!1.55e-11!248;CL:0000220!6.64e-11!246;CL:0000860!4.31e-09!45;CL:0002057!5.89e-09!42;CL:0000223!1.39e-07!59;CL:0002076!1.67e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-15;33!CL:0002057;4.56e-15;33!CL:0000473;3.22e-10;39!CL:0000234;3.22e-10;39!CL:1000507;5.66e-07;10!CL:1000494;5.66e-07;10 | |ontology_enrichment_celltype_v019=CL:0000860;4.56e-15;33!CL:0002057;4.56e-15;33!CL:0000473;3.22e-10;39!CL:0000234;3.22e-10;39!CL:1000507;5.66e-07;10!CL:1000494;5.66e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.40e-28,253;CL:0002321,2.07e-11,250;CL:0000860,5.88e-09,42;CL:0002057,5.88e-09,42;CL:0002076,5.03e-08,42;CL:0000223,5.17e-08,58;CL:0000473,1.56e-07,48;CL:0000234,1.56e-07,48;CL:1000507,5.74e-07,10;CL:1000494,5.74e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.51e-07;42 | |ontology_enrichment_development_v019=CL:0002057;3.51e-07;42 | ||
|ontology_enrichment_disease=DOID:305!2.07e-09!106;DOID:0050687!9.65e-09!143 | |ontology_enrichment_disease=DOID:305!2.07e-09!106;DOID:0050687!9.65e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.12e-09,106;DOID:0050687,9.52e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.64e-10!448;UBERON:0004120!1.64e-10!448;UBERON:0006603!1.64e-10!448;UBERON:0000464!4.32e-09!104;UBERON:0000466!2.12e-08!126;UBERON:0003886!5.14e-08!63;UBERON:0002553!1.49e-07!70 | |ontology_enrichment_uberon=UBERON:0000926!1.64e-10!448;UBERON:0004120!1.64e-10!448;UBERON:0006603!1.64e-10!448;UBERON:0000464!4.32e-09!104;UBERON:0000466!2.12e-08!126;UBERON:0003886!5.14e-08!63;UBERON:0002553!1.49e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.66e-07;10!UBERON:0009773;5.66e-07;10!UBERON:0001231;5.66e-07;10!UBERON:0004810;5.66e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004211;5.66e-07;10!UBERON:0009773;5.66e-07;10!UBERON:0001231;5.66e-07;10!UBERON:0004810;5.66e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.74e-07,10 | |||
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| ||
|short_description=p1@TGIF1 | |short_description=p1@TGIF1 | ||
}} | }} |
Latest revision as of 10:17, 19 September 2015
Short description: | p1@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551402, NM_003244, uc002kly.2, uc010dkm.1_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | F8W1J9Q15583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.40e-28 | 253 |
embryonic cell | 2.07e-11 | 250 |
classical monocyte | 5.88e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.88e-09 | 42 |
endo-epithelial cell | 5.03e-08 | 42 |
endodermal cell | 5.17e-08 | 58 |
defensive cell | 1.56e-07 | 48 |
phagocyte | 1.56e-07 | 48 |
kidney tubule cell | 5.74e-07 | 10 |
nephron tubule epithelial cell | 5.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.12e-09 | 106 |
cell type cancer | 9.52e-09 | 143 |