FFCP PHASE1:Hg19::chr11:67182776..67182814,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57571 | |EntrezGene=57571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29268 | |HGNC=29268 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000529925_5end | |association_with_transcript=-17bp_to_ENST00000529925_5end | ||
|cluster_id=chr11:67182776..67182814,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_2_at_CARNS1_5end | |description=CAGE_peak_2_at_CARNS1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.20e-09!18;CL:0000789!2.20e-09!18;CL:0002420!2.20e-09!18;CL:0002419!2.20e-09!18;CL:0000790!2.20e-09!18;CL:0000625!1.15e-07!11;CL:0000542!2.77e-07!53;CL:0000051!2.77e-07!53;CL:0000838!4.74e-07!52 | |ontology_enrichment_celltype=CL:0000791!2.20e-09!18;CL:0000789!2.20e-09!18;CL:0002420!2.20e-09!18;CL:0002419!2.20e-09!18;CL:0000790!2.20e-09!18;CL:0000625!1.15e-07!11;CL:0000542!2.77e-07!53;CL:0000051!2.77e-07!53;CL:0000838!4.74e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.45e-09;13!CL:0000625;1.18e-08;11!CL:0000791;1.73e-08;18!CL:0000789;1.73e-08;18!CL:0002419;1.73e-08;18 | |ontology_enrichment_celltype_v019=CL:0000236;9.45e-09;13!CL:0000625;1.18e-08;11!CL:0000791;1.73e-08;18!CL:0000789;1.73e-08;18!CL:0002419;1.73e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.63e-10,52;CL:0000542,1.35e-09,53;CL:0000051,1.35e-09,53;CL:0000625,1.51e-08,11;CL:0000791,1.98e-08,18;CL:0000789,1.98e-08,18;CL:0002420,1.98e-08,18;CL:0002419,1.98e-08,18;CL:0000790,1.98e-08,18;CL:0000236,3.13e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.85e-10;82!CL:0000790;1.73e-08;18 | |ontology_enrichment_development_v019=UBERON:0006601;4.85e-10;82!CL:0000790;1.73e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-35!115;UBERON:0001049!1.23e-25!57;UBERON:0005068!1.23e-25!57;UBERON:0006241!1.23e-25!57;UBERON:0007135!1.23e-25!57;UBERON:0005743!1.54e-25!86;UBERON:0001017!7.51e-23!82;UBERON:0000955!1.13e-22!69;UBERON:0006238!1.13e-22!69;UBERON:0000073!6.37e-22!94;UBERON:0001016!6.37e-22!94;UBERON:0002616!8.14e-22!59;UBERON:0002346!4.61e-21!90;UBERON:0003075!2.66e-20!86;UBERON:0007284!2.66e-20!86;UBERON:0002780!6.31e-20!41;UBERON:0001890!6.31e-20!41;UBERON:0006240!6.31e-20!41;UBERON:0002020!6.91e-20!34;UBERON:0003528!6.91e-20!34;UBERON:0001893!7.06e-20!34;UBERON:0002791!4.27e-19!33;UBERON:0003080!4.29e-19!42;UBERON:0001869!3.73e-18!32;UBERON:0000153!1.38e-14!129;UBERON:0007811!1.38e-14!129;UBERON:0003056!3.15e-13!61;UBERON:0000033!4.91e-13!123;UBERON:0000956!1.41e-12!25;UBERON:0000203!1.41e-12!25;UBERON:0002619!3.19e-12!22;UBERON:0001950!1.02e-10!20;UBERON:0000924!2.43e-09!173;UBERON:0006601!2.43e-09!173;UBERON:0002308!2.80e-09!9;UBERON:0000125!2.80e-09!9;UBERON:0002420!4.42e-09!9;UBERON:0007245!4.42e-09!9;UBERON:0010009!4.42e-09!9;UBERON:0010011!4.42e-09!9;UBERON:0000454!4.42e-09!9;UBERON:0004121!9.54e-09!169;UBERON:0003076!1.01e-07!15;UBERON:0003057!1.01e-07!15;UBERON:0009663!1.53e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.37e-35!115;UBERON:0001049!1.23e-25!57;UBERON:0005068!1.23e-25!57;UBERON:0006241!1.23e-25!57;UBERON:0007135!1.23e-25!57;UBERON:0005743!1.54e-25!86;UBERON:0001017!7.51e-23!82;UBERON:0000955!1.13e-22!69;UBERON:0006238!1.13e-22!69;UBERON:0000073!6.37e-22!94;UBERON:0001016!6.37e-22!94;UBERON:0002616!8.14e-22!59;UBERON:0002346!4.61e-21!90;UBERON:0003075!2.66e-20!86;UBERON:0007284!2.66e-20!86;UBERON:0002780!6.31e-20!41;UBERON:0001890!6.31e-20!41;UBERON:0006240!6.31e-20!41;UBERON:0002020!6.91e-20!34;UBERON:0003528!6.91e-20!34;UBERON:0001893!7.06e-20!34;UBERON:0002791!4.27e-19!33;UBERON:0003080!4.29e-19!42;UBERON:0001869!3.73e-18!32;UBERON:0000153!1.38e-14!129;UBERON:0007811!1.38e-14!129;UBERON:0003056!3.15e-13!61;UBERON:0000033!4.91e-13!123;UBERON:0000956!1.41e-12!25;UBERON:0000203!1.41e-12!25;UBERON:0002619!3.19e-12!22;UBERON:0001950!1.02e-10!20;UBERON:0000924!2.43e-09!173;UBERON:0006601!2.43e-09!173;UBERON:0002308!2.80e-09!9;UBERON:0000125!2.80e-09!9;UBERON:0002420!4.42e-09!9;UBERON:0007245!4.42e-09!9;UBERON:0010009!4.42e-09!9;UBERON:0010011!4.42e-09!9;UBERON:0000454!4.42e-09!9;UBERON:0004121!9.54e-09!169;UBERON:0003076!1.01e-07!15;UBERON:0003057!1.01e-07!15;UBERON:0009663!1.53e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.57e-27;34!UBERON:0003528;3.47e-26;34!UBERON:0002020;3.47e-26;34!UBERON:0002791;2.40e-25;32!UBERON:0001869;2.72e-25;32!UBERON:0002780;1.82e-22;41!UBERON:0001890;1.82e-22;41!UBERON:0002619;5.43e-22;22!UBERON:0000073;1.08e-21;53!UBERON:0002616;1.08e-21;53!UBERON:0001950;2.68e-19;20!UBERON:0000956;1.01e-18;25!UBERON:0000203;1.01e-18;25!UBERON:0001017;5.95e-17;75!UBERON:0000955;2.48e-16;68!UBERON:0000125;3.78e-15;9!UBERON:0002308;3.78e-15;9!UBERON:0002420;8.85e-15;9!UBERON:0007245;8.85e-15;9!UBERON:0010009;8.85e-15;9!UBERON:0010011;8.85e-15;9!UBERON:0000454;8.85e-15;9!UBERON:0001016;2.00e-12;83!UBERON:0009663;4.39e-12;7!UBERON:0007023;6.35e-12;114!UBERON:0002298;9.19e-11;6!UBERON:0000200;1.46e-09;6!UBERON:0004732;1.58e-09;13!UBERON:0000349;1.34e-08;5!UBERON:0004733;3.87e-08;12!UBERON:0002028;3.87e-08;12!UBERON:0000369;2.16e-07;4!UBERON:0002435;2.16e-07;4!UBERON:0000204;2.16e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001893;4.57e-27;34!UBERON:0003528;3.47e-26;34!UBERON:0002020;3.47e-26;34!UBERON:0002791;2.40e-25;32!UBERON:0001869;2.72e-25;32!UBERON:0002780;1.82e-22;41!UBERON:0001890;1.82e-22;41!UBERON:0002619;5.43e-22;22!UBERON:0000073;1.08e-21;53!UBERON:0002616;1.08e-21;53!UBERON:0001950;2.68e-19;20!UBERON:0000956;1.01e-18;25!UBERON:0000203;1.01e-18;25!UBERON:0001017;5.95e-17;75!UBERON:0000955;2.48e-16;68!UBERON:0000125;3.78e-15;9!UBERON:0002308;3.78e-15;9!UBERON:0002420;8.85e-15;9!UBERON:0007245;8.85e-15;9!UBERON:0010009;8.85e-15;9!UBERON:0010011;8.85e-15;9!UBERON:0000454;8.85e-15;9!UBERON:0001016;2.00e-12;83!UBERON:0009663;4.39e-12;7!UBERON:0007023;6.35e-12;114!UBERON:0002298;9.19e-11;6!UBERON:0000200;1.46e-09;6!UBERON:0004732;1.58e-09;13!UBERON:0000349;1.34e-08;5!UBERON:0004733;3.87e-08;12!UBERON:0002028;3.87e-08;12!UBERON:0000369;2.16e-07;4!UBERON:0002435;2.16e-07;4!UBERON:0000204;2.16e-07;4 | ||
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| ||
|short_description=p2@CARNS1 | |short_description=p2@CARNS1 | ||
}} | }} |
Latest revision as of 17:55, 19 September 2015
Short description: | p2@CARNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CARNS1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -17bp_to_ENST00000529925_5end |
EntrezGene: | CARNS1 |
HGNC: | 29268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.63e-10 | 52 |
lymphocyte | 1.35e-09 | 53 |
common lymphoid progenitor | 1.35e-09 | 53 |
CD8-positive, alpha-beta T cell | 1.51e-08 | 11 |
mature alpha-beta T cell | 1.98e-08 | 18 |
alpha-beta T cell | 1.98e-08 | 18 |
immature T cell | 1.98e-08 | 18 |
mature T cell | 1.98e-08 | 18 |
immature alpha-beta T cell | 1.98e-08 | 18 |
B cell | 3.13e-08 | 14 |