FFCP PHASE1:Hg19::chr2:137719997..137720001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:137719997..137720001,+ | |||
|coexpression_cluster_id=C4130 | |coexpression_cluster_id=C4130 | ||
|description=CAGE_peak_at_chr2:137719997..137720001,+ | |description=CAGE_peak_at_chr2:137719997..137720001,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | |ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10!DOID:0060058;6.34e-08;10 | |ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10!DOID:0060058;6.34e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10;DOID:0060058,6.13e-08,10 | |||
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|short_description=p@chr2:137719997..137720001,+ | |short_description=p@chr2:137719997..137720001,+ | ||
}} | }} |
Latest revision as of 00:41, 29 July 2015
Short description: | p@chr2:137719997..137720001, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:137719997..137720001, + |
Coexpression cluster: | C4130_neuroblastoma_Burkitt_pons_occipital_optic_temporal_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
peripheral nervous system | 3.09e-30 | 8 |
layer of retina | 1.03e-17 | 4 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |
lymphoma | 6.13e-08 | 10 |