FFCP PHASE1:Hg19::chr15:100875730..100875747,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:100875730..100875747,- | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_at_chr15:100875730..100875747,- | |description=CAGE_peak_at_chr15:100875730..100875747,- | ||
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|ontology_enrichment_celltype=CL:0002127!1.31e-11!1;CL:0000914!1.31e-11!1;CL:0000911!1.31e-11!1;CL:0000814!1.31e-11!1;CL:0002042!1.31e-11!1;CL:0002039!1.31e-11!1;CL:0002040!1.31e-11!1;CL:0002041!1.31e-11!1;CL:0002566!4.91e-11!1 | |ontology_enrichment_celltype=CL:0002127!1.31e-11!1;CL:0000914!1.31e-11!1;CL:0000911!1.31e-11!1;CL:0000814!1.31e-11!1;CL:0002042!1.31e-11!1;CL:0002039!1.31e-11!1;CL:0002040!1.31e-11!1;CL:0002041!1.31e-11!1;CL:0002566!4.91e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;7.06e-34;1!CL:0000911;7.06e-34;1!CL:0000814;7.06e-34;1 | |ontology_enrichment_celltype_v019=CL:0002127;7.06e-34;1!CL:0000911;7.06e-34;1!CL:0000814;7.06e-34;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.06e-34,1;CL:0000914,7.06e-34,1;CL:0000911,7.06e-34,1;CL:0000814,7.06e-34,1;CL:0002042,7.06e-34,1;CL:0002039,7.06e-34,1;CL:0002040,7.06e-34,1;CL:0002041,7.06e-34,1;CL:0000893,1.07e-17,2;CL:0002489,1.07e-17,2;CL:0000809,1.07e-17,2;CL:0000808,1.07e-17,2;CL:0000894,1.07e-17,2;CL:0000806,1.07e-17,2;CL:0000807,1.07e-17,2;CL:0000805,1.07e-17,2;CL:0002425,1.07e-17,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.07e-17;2!UBERON:0006965;1.07e-17;2 | |ontology_enrichment_development_v019=CL:0002425;1.07e-17;2!UBERON:0006965;1.07e-17;2 | ||
|ontology_enrichment_disease=DOID:171!3.41e-16!10;DOID:169!1.67e-15!6;DOID:2355!2.18e-11!1;DOID:3095!1.81e-07!22;DOID:2994!1.81e-07!22 | |ontology_enrichment_disease=DOID:171!3.41e-16!10;DOID:169!1.67e-15!6;DOID:2355!2.18e-11!1;DOID:3095!1.81e-07!22;DOID:2994!1.81e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:2531;6.02e-07;51!DOID:0060083;6.02e-07;51 | |ontology_enrichment_disease_v019=DOID:2531;6.02e-07;51!DOID:0060083;6.02e-07;51 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.01e-23!4;UBERON:0005058!1.01e-23!4;UBERON:0009113!1.01e-23!4;UBERON:0003295!1.01e-23!4;UBERON:0005562!1.01e-23!4;UBERON:0000013!1.77e-18!5;UBERON:0002410!1.77e-18!5;UBERON:0003351!5.00e-16!6;UBERON:0004177!8.02e-14!7;UBERON:0002902!4.44e-11!1;UBERON:0009899!4.44e-11!1;UBERON:0000010!1.58e-10!8;UBERON:0000974!7.76e-10!10;UBERON:0003408!7.76e-10!10;UBERON:0001042!7.76e-10!10;UBERON:0009145!7.76e-10!10;UBERON:0006562!5.48e-09!11;UBERON:0009722!5.48e-09!11;UBERON:0007690!5.48e-09!11;UBERON:0001950!1.25e-07!20;UBERON:0002619!5.58e-07!22 | |ontology_enrichment_uberon=UBERON:0002370!1.01e-23!4;UBERON:0005058!1.01e-23!4;UBERON:0009113!1.01e-23!4;UBERON:0003295!1.01e-23!4;UBERON:0005562!1.01e-23!4;UBERON:0000013!1.77e-18!5;UBERON:0002410!1.77e-18!5;UBERON:0003351!5.00e-16!6;UBERON:0004177!8.02e-14!7;UBERON:0002902!4.44e-11!1;UBERON:0009899!4.44e-11!1;UBERON:0000010!1.58e-10!8;UBERON:0000974!7.76e-10!10;UBERON:0003408!7.76e-10!10;UBERON:0001042!7.76e-10!10;UBERON:0009145!7.76e-10!10;UBERON:0006562!5.48e-09!11;UBERON:0009722!5.48e-09!11;UBERON:0007690!5.48e-09!11;UBERON:0001950!1.25e-07!20;UBERON:0002619!5.58e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.96e-66;2!UBERON:0005058;3.96e-66;2!UBERON:0009113;3.96e-66;2!UBERON:0004177;3.11e-27;5!UBERON:0005057;3.11e-27;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.96e-66;2!UBERON:0005058;3.96e-66;2!UBERON:0009113;3.96e-66;2!UBERON:0004177;3.11e-27;5!UBERON:0005057;3.11e-27;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.48e-74,4;UBERON:0005058,5.48e-74,4;UBERON:0009113,5.48e-74,4;UBERON:0003295,5.48e-74,4;UBERON:0005562,5.48e-74,4;UBERON:0003351,1.05e-49,6;UBERON:0004177,9.27e-43,7;UBERON:0005057,9.27e-43,7;UBERON:0000974,3.07e-30,10;UBERON:0003408,3.07e-30,10;UBERON:0001042,3.07e-30,10;UBERON:0009145,3.07e-30,10;UBERON:0006562,1.40e-27,11;UBERON:0009722,1.40e-27,11;UBERON:0007690,1.40e-27,11;UBERON:0008814,3.30e-17,18;UBERON:0001557,2.39e-16,19;UBERON:0004807,2.37e-11,28;UBERON:0000077,5.50e-11,29;UBERON:0002368,3.15e-09,35;UBERON:0000949,2.49e-07,45;UBERON:0000072,4.79e-07,47 | |||
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|short_description=p@chr15:100875730..100875747,- | |short_description=p@chr15:100875730..100875747,- | ||
}} | }} |
Latest revision as of 00:15, 25 July 2015
Short description: | p@chr15:100875730..100875747, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:100875730..100875747, - |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.06e-34 | 1 |
immature NK T cell | 7.06e-34 | 1 |
effector T cell | 7.06e-34 | 1 |
mature NK T cell | 7.06e-34 | 1 |
immature NK T cell stage IV | 7.06e-34 | 1 |
immature NK T cell stage I | 7.06e-34 | 1 |
immature NK T cell stage II | 7.06e-34 | 1 |
immature NK T cell stage III | 7.06e-34 | 1 |
thymocyte | 1.07e-17 | 2 |
double negative thymocyte | 1.07e-17 | 2 |
double-positive, alpha-beta thymocyte | 1.07e-17 | 2 |
DN4 thymocyte | 1.07e-17 | 2 |
DN1 thymic pro-T cell | 1.07e-17 | 2 |
DN2 thymocyte | 1.07e-17 | 2 |
DN3 thymocyte | 1.07e-17 | 2 |
immature single positive thymocyte | 1.07e-17 | 2 |
early T lineage precursor | 1.07e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.48e-74 | 4 |
hemolymphoid system gland | 5.48e-74 | 4 |
thymic region | 5.48e-74 | 4 |
pharyngeal gland | 5.48e-74 | 4 |
thymus primordium | 5.48e-74 | 4 |
pharyngeal epithelium | 1.05e-49 | 6 |
hemopoietic organ | 9.27e-43 | 7 |
immune organ | 9.27e-43 | 7 |
neck | 3.07e-30 | 10 |
gland of gut | 3.07e-30 | 10 |
chordate pharynx | 3.07e-30 | 10 |
pharyngeal region of foregut | 3.07e-30 | 10 |
pharynx | 1.40e-27 | 11 |
entire pharyngeal arch endoderm | 1.40e-27 | 11 |
early pharyngeal endoderm | 1.40e-27 | 11 |
pharyngeal arch system | 3.30e-17 | 18 |
upper respiratory tract | 2.39e-16 | 19 |
respiratory system epithelium | 2.37e-11 | 28 |
mixed endoderm/mesoderm-derived structure | 5.50e-11 | 29 |
endocrine gland | 3.15e-09 | 35 |
endocrine system | 2.49e-07 | 45 |
segment of respiratory tract | 4.79e-07 | 47 |