FFCP PHASE1:Hg19::chr14:93388989..93389000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1113 | |EntrezGene=1113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1929 | |HGNC=1929 | ||
|TSSclassifier=strong | |||
|UniProt=P10645 | |UniProt=P10645 | ||
|association_with_transcript=-424bp_to_ENST00000216492_5end | |association_with_transcript=-424bp_to_ENST00000216492_5end | ||
|cluster_id=chr14:93388989..93389000,+ | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_6_at_CHGA_5end | |description=CAGE_peak_6_at_CHGA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.71e-19;1!CL:0002535;1.43e-10;2!CL:0000159;1.97e-10;2 | |ontology_enrichment_celltype_v019=CL:0000319;1.71e-19;1!CL:0002535;1.43e-10;2!CL:0000159;1.97e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.25e-19,1;CL:0002535,1.43e-10,2;CL:0000159,2.27e-10,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.71e-19;1!DOID:4556;2.25e-07;3 | |ontology_enrichment_disease_v019=DOID:3030;1.71e-19;1!DOID:4556;2.25e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,2.25e-19,1;DOID:4556,2.19e-07,3 | |||
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| ||
|short_description=p6@CHGA | |short_description=p6@CHGA | ||
}} | }} |
Latest revision as of 15:36, 16 September 2015
Short description: | p6@CHGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHGA_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -424bp_to_ENST00000216492_5end |
EntrezGene: | CHGA |
HGNC: | 1929 |
UniProt: | P10645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.25e-19 | 1 |
epithelial cell of cervix | 1.43e-10 | 2 |
seromucus secreting cell | 2.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
postcentral gyrus | 4.69e-19 | 1 |
neocortex | 6.25e-14 | 20 |
gyrus | 7.33e-13 | 6 |
regional part of cerebral cortex | 9.43e-13 | 22 |
cerebral cortex | 2.54e-11 | 25 |
pallium | 2.54e-11 | 25 |
temporal lobe | 3.66e-11 | 6 |
regional part of forebrain | 9.29e-11 | 41 |
forebrain | 9.29e-11 | 41 |
anterior neural tube | 9.29e-11 | 41 |
future forebrain | 9.29e-11 | 41 |
uterine epithelium | 1.43e-10 | 2 |
cervix epithelium | 1.43e-10 | 2 |
pituitary gland | 1.72e-10 | 2 |
amygdala | 2.49e-10 | 2 |
middle frontal gyrus | 2.72e-10 | 2 |
regional part of telencephalon | 5.47e-09 | 32 |
cerebral hemisphere | 5.47e-09 | 32 |
brain grey matter | 1.72e-08 | 34 |
gray matter | 1.72e-08 | 34 |
telencephalon | 1.72e-08 | 34 |
regional part of nervous system | 2.23e-08 | 53 |
regional part of brain | 2.23e-08 | 53 |
neural tube | 6.13e-08 | 56 |
neural rod | 6.13e-08 | 56 |
future spinal cord | 6.13e-08 | 56 |
neural keel | 6.13e-08 | 56 |
duodenum | 1.93e-07 | 2 |
pre-chordal neural plate | 2.67e-07 | 61 |
frontal cortex | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.25e-19 | 1 |
lung large cell carcinoma | 2.19e-07 | 3 |