FFCP PHASE1:Hg19::chr18:49866496..49866548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1630 | |EntrezGene=1630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2701 | |HGNC=2701 | ||
|TSSclassifier=strong | |||
|UniProt=P43146,Q49AK4 | |UniProt=P43146,Q49AK4 | ||
|association_with_transcript=0bp_to_NM_005215_5end | |association_with_transcript=0bp_to_NM_005215_5end | ||
|cluster_id=chr18:49866496..49866548,+ | |||
|coexpression_cluster_id=C1442 | |coexpression_cluster_id=C1442 | ||
|description=CAGE_peak_2_at_DCC_5end | |description=CAGE_peak_2_at_DCC_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.12e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.66e-16;82!UBERON:0006241;1.91e-08;3!UBERON:0003057;1.91e-08;3!UBERON:0010122;4.07e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;3.66e-16;82!UBERON:0006241;1.91e-08;3!UBERON:0003057;1.91e-08;3!UBERON:0010122;4.07e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;5.21e-07;10 | |ontology_enrichment_disease_v019=DOID:171;5.21e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,4.99e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.54e-55!94;UBERON:0001016!3.54e-55!94;UBERON:0001017!5.40e-55!82;UBERON:0005743!4.17e-53!86;UBERON:0001049!4.82e-50!57;UBERON:0005068!4.82e-50!57;UBERON:0006241!4.82e-50!57;UBERON:0007135!4.82e-50!57;UBERON:0000955!2.15e-45!69;UBERON:0006238!2.15e-45!69;UBERON:0002616!4.60e-45!59;UBERON:0002780!8.97e-41!41;UBERON:0001890!8.97e-41!41;UBERON:0006240!8.97e-41!41;UBERON:0003080!1.65e-39!42;UBERON:0002346!1.10e-37!90;UBERON:0002020!1.22e-37!34;UBERON:0003528!1.22e-37!34;UBERON:0001893!3.64e-37!34;UBERON:0002791!7.71e-36!33;UBERON:0001869!2.83e-35!32;UBERON:0003075!1.34e-34!86;UBERON:0007284!1.34e-34!86;UBERON:0000924!1.31e-31!173;UBERON:0006601!1.31e-31!173;UBERON:0002619!4.62e-30!22;UBERON:0007023!7.18e-30!115;UBERON:0004121!4.95e-29!169;UBERON:0003056!1.65e-27!61;UBERON:0001950!4.52e-27!20;UBERON:0000956!1.19e-25!25;UBERON:0000203!1.19e-25!25;UBERON:0000153!3.65e-25!129;UBERON:0007811!3.65e-25!129;UBERON:0000033!6.78e-24!123;UBERON:0002308!1.50e-13!9;UBERON:0000125!1.50e-13!9;UBERON:0002420!2.04e-13!9;UBERON:0007245!2.04e-13!9;UBERON:0010009!2.04e-13!9;UBERON:0010011!2.04e-13!9;UBERON:0000454!2.04e-13!9;UBERON:0000025!4.58e-12!194;UBERON:0003076!1.93e-11!15;UBERON:0003057!1.93e-11!15;UBERON:0009663!7.05e-11!7;UBERON:0000475!4.88e-10!365;UBERON:0000200!1.07e-09!6;UBERON:0001871!1.17e-09!7;UBERON:0000483!1.82e-09!309;UBERON:0000119!3.50e-09!312;UBERON:0000477!6.55e-09!286;UBERON:0004111!1.11e-08!241;UBERON:0000349!1.47e-08!5;UBERON:0001872!1.66e-08!5;UBERON:0002021!2.64e-08!5;UBERON:0002298!2.67e-08!8;UBERON:0004733!4.81e-08!12;UBERON:0002028!4.81e-08!12;UBERON:0007277!4.81e-08!12;UBERON:0000922!6.41e-08!612;UBERON:0000468!7.34e-08!659;UBERON:0000369!1.83e-07!4;UBERON:0002435!1.83e-07!4;UBERON:0000204!1.83e-07!4;UBERON:0010082!1.83e-07!4;UBERON:0004732!2.86e-07!13 | |ontology_enrichment_uberon=UBERON:0000073!3.54e-55!94;UBERON:0001016!3.54e-55!94;UBERON:0001017!5.40e-55!82;UBERON:0005743!4.17e-53!86;UBERON:0001049!4.82e-50!57;UBERON:0005068!4.82e-50!57;UBERON:0006241!4.82e-50!57;UBERON:0007135!4.82e-50!57;UBERON:0000955!2.15e-45!69;UBERON:0006238!2.15e-45!69;UBERON:0002616!4.60e-45!59;UBERON:0002780!8.97e-41!41;UBERON:0001890!8.97e-41!41;UBERON:0006240!8.97e-41!41;UBERON:0003080!1.65e-39!42;UBERON:0002346!1.10e-37!90;UBERON:0002020!1.22e-37!34;UBERON:0003528!1.22e-37!34;UBERON:0001893!3.64e-37!34;UBERON:0002791!7.71e-36!33;UBERON:0001869!2.83e-35!32;UBERON:0003075!1.34e-34!86;UBERON:0007284!1.34e-34!86;UBERON:0000924!1.31e-31!173;UBERON:0006601!1.31e-31!173;UBERON:0002619!4.62e-30!22;UBERON:0007023!7.18e-30!115;UBERON:0004121!4.95e-29!169;UBERON:0003056!1.65e-27!61;UBERON:0001950!4.52e-27!20;UBERON:0000956!1.19e-25!25;UBERON:0000203!1.19e-25!25;UBERON:0000153!3.65e-25!129;UBERON:0007811!3.65e-25!129;UBERON:0000033!6.78e-24!123;UBERON:0002308!1.50e-13!9;UBERON:0000125!1.50e-13!9;UBERON:0002420!2.04e-13!9;UBERON:0007245!2.04e-13!9;UBERON:0010009!2.04e-13!9;UBERON:0010011!2.04e-13!9;UBERON:0000454!2.04e-13!9;UBERON:0000025!4.58e-12!194;UBERON:0003076!1.93e-11!15;UBERON:0003057!1.93e-11!15;UBERON:0009663!7.05e-11!7;UBERON:0000475!4.88e-10!365;UBERON:0000200!1.07e-09!6;UBERON:0001871!1.17e-09!7;UBERON:0000483!1.82e-09!309;UBERON:0000119!3.50e-09!312;UBERON:0000477!6.55e-09!286;UBERON:0004111!1.11e-08!241;UBERON:0000349!1.47e-08!5;UBERON:0001872!1.66e-08!5;UBERON:0002021!2.64e-08!5;UBERON:0002298!2.67e-08!8;UBERON:0004733!4.81e-08!12;UBERON:0002028!4.81e-08!12;UBERON:0007277!4.81e-08!12;UBERON:0000922!6.41e-08!612;UBERON:0000468!7.34e-08!659;UBERON:0000369!1.83e-07!4;UBERON:0002435!1.83e-07!4;UBERON:0000204!1.83e-07!4;UBERON:0010082!1.83e-07!4;UBERON:0004732!2.86e-07!13 | ||
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|short_description=p2@DCC | |short_description=p2@DCC | ||
}} | }} |
Latest revision as of 19:13, 19 September 2015
Short description: | p2@DCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DCC_5end |
Coexpression cluster: | C1442_neuroectodermal_parietal_small_caudate_hippocampus_occipital_pineal |
Association with transcript: | 0bp_to_NM_005215_5end |
EntrezGene: | DCC |
HGNC: | 2701 |
UniProt: | P43146Q49AK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.99e-07 | 10 |