FFCP PHASE1:Hg19::chr21:39870339..39870443,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:39870339..39870443,-
|short_description=p1@ERG
|description=CAGE_peak_1_at_ERG_5end
|association_with_transcript=0bp_to_ENST00000288319,ENST00000398905,EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2078 | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3446 | |HGNC=3446 | ||
|TSSclassifier=strong | |||
|UniProt=B5MDW0,A8MX39,B4E3C5,P11308 | |UniProt=B5MDW0,A8MX39,B4E3C5,P11308 | ||
|association_with_transcript=0bp_to_ENST00000288319,ENST00000398905,ENST00000398907,ENST00000429727,ENST00000453032,ENST00000481609,NM_001136155,NM_182918,uc002yxa.2,uc011aek.1,uc011aem.1_5end | |||
|cluster_id=chr21:39870339..39870443,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_1_at_ERG_5end | |||
|id=chr21:39870339..39870443,- | |||
|ontology_enrichment_celltype=CL:0002139!2.57e-23!24;CL:0000115!2.87e-21!35;CL:0000071!1.22e-17!18;CL:0002546!1.22e-17!18;CL:0002078!7.19e-15!44;CL:1000413!1.41e-09!9;CL:0000213!1.11e-08!57;CL:0000215!1.11e-08!57;CL:0005020!3.14e-07!6;CL:0002138!3.14e-07!6;CL:0005022!3.14e-07!6;CL:0002543!6.38e-07!6;CL:0002544!7.51e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.95e-27;24!CL:0000115;1.25e-21;36!CL:0000071;1.12e-20;18!CL:0002078;1.06e-11;45!CL:1000413;4.42e-11;9!CL:0002138;2.64e-08;6!CL:0002543;6.06e-08;6!CL:0002544;7.56e-08;6!CL:0000213;8.61e-08;58!CL:0000215;8.61e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.94e-27,24;CL:0000115,1.82e-25,36;CL:0000071,1.11e-20,18;CL:0002546,1.11e-20,18;CL:0002078,7.69e-18,45;CL:0000213,2.91e-11,58;CL:0000215,2.91e-11,58;CL:1000413,4.32e-11,9;CL:0005020,2.64e-08,6;CL:0002138,2.64e-08,6;CL:0005022,2.64e-08,6;CL:0002543,6.13e-08,6;CL:0002544,7.44e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.12e-20;18!CL:0005022;2.64e-08;6!UBERON:0006601;7.18e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.44e-51!115;UBERON:0001049!4.73e-19!57;UBERON:0005068!4.73e-19!57;UBERON:0006241!4.73e-19!57;UBERON:0007135!4.73e-19!57;UBERON:0004111!2.30e-18!241;UBERON:0000025!5.48e-18!194;UBERON:0001986!1.22e-17!18;UBERON:0004638!1.22e-17!18;UBERON:0004852!1.22e-17!18;UBERON:0003080!1.10e-15!42;UBERON:0002780!5.47e-15!41;UBERON:0001890!5.47e-15!41;UBERON:0006240!5.47e-15!41;UBERON:0002616!9.50e-15!59;UBERON:0000477!1.17e-14!286;UBERON:0003075!2.56e-13!86;UBERON:0007284!2.56e-13!86;UBERON:0001017!3.79e-13!82;UBERON:0000487!6.75e-13!22;UBERON:0002020!1.30e-12!34;UBERON:0003528!1.30e-12!34;UBERON:0005743!1.59e-12!86;UBERON:0001893!1.67e-12!34;UBERON:0000955!3.06e-12!69;UBERON:0006238!3.06e-12!69;UBERON:0002791!4.25e-12!33;UBERON:0002346!6.16e-12!90;UBERON:0001869!1.17e-11!32;UBERON:0006914!3.16e-11!25;UBERON:0002619!5.98e-11!22;UBERON:0000073!7.64e-11!94;UBERON:0001016!7.64e-11!94;UBERON:0001950!4.11e-10!20;UBERON:0001009!7.74e-10!113;UBERON:0000055!1.14e-09!69;UBERON:0004872!1.27e-09!84;UBERON:0003915!1.41e-09!9;UBERON:0004700!1.41e-09!9;UBERON:0001917!1.41e-09!9;UBERON:0000956!7.62e-09!25;UBERON:0000203!7.62e-09!25;UBERON:0003056!8.65e-09!61;UBERON:0004535!9.41e-09!110;UBERON:0002049!1.34e-07!79;UBERON:0007798!1.34e-07!79;UBERON:0003081!1.43e-07!216;UBERON:0000483!2.06e-07!309;UBERON:0000467!2.24e-07!625;UBERON:0001981!2.55e-07!60;UBERON:0007500!2.55e-07!60;UBERON:0004537!2.55e-07!60;UBERON:0006965!2.55e-07!60;UBERON:0000480!2.83e-07!626;UBERON:0000119!4.60e-07!312;UBERON:0000468!5.89e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.12e-20;18!UBERON:0001986;1.12e-20;18!UBERON:0004852;1.12e-20;18!UBERON:0000487;1.53e-15;22!UBERON:0007023;1.45e-14;114!UBERON:0006914;8.21e-13;25!UBERON:0002780;9.06e-13;41!UBERON:0001890;9.06e-13;41!UBERON:0002619;1.07e-12;22!UBERON:0003528;1.08e-12;34!UBERON:0002020;1.08e-12;34!UBERON:0001893;1.13e-12;34!UBERON:0002791;1.32e-12;32!UBERON:0001869;1.55e-12;32!UBERON:0001950;1.07e-11;20!UBERON:0000073;1.85e-11;53!UBERON:0002616;1.85e-11;53!UBERON:0003915;4.42e-11;9!UBERON:0004700;4.42e-11;9!UBERON:0001917;4.42e-11;9!UBERON:0000956;1.76e-10;25!UBERON:0000203;1.76e-10;25!UBERON:0001017;1.23e-07;75!UBERON:0000490;1.41e-07;33!UBERON:0000955;3.81e-07;68!UBERON:0002465;5.15e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.95e-54,114;UBERON:0004111,1.19e-22,240;UBERON:0000025,2.41e-21,192;UBERON:0001049,3.52e-21,56;UBERON:0005068,3.52e-21,56;UBERON:0006241,3.52e-21,56;UBERON:0007135,3.52e-21,56;UBERON:0004638,1.11e-20,18;UBERON:0001986,1.11e-20,18;UBERON:0004852,1.11e-20,18;UBERON:0000073,1.99e-19,53;UBERON:0002616,1.99e-19,53;UBERON:0002780,7.31e-17,41;UBERON:0001890,7.31e-17,41;UBERON:0003080,7.31e-17,41;UBERON:0006240,7.31e-17,41;UBERON:0000487,1.52e-15,22;UBERON:0001017,4.16e-15,81;UBERON:0003075,4.51e-15,82;UBERON:0007284,4.51e-15,82;UBERON:0003528,5.36e-15,34;UBERON:0002020,5.36e-15,34;UBERON:0001893,7.25e-15,34;UBERON:0000955,3.04e-14,68;UBERON:0006238,3.04e-14,68;UBERON:0002791,5.98e-14,32;UBERON:0001869,7.38e-14,32;UBERON:0002346,1.15e-13,86;UBERON:0001016,7.24e-13,89;UBERON:0006914,8.19e-13,25;UBERON:0002619,1.01e-12,22;UBERON:0010314,2.67e-12,132;UBERON:0001950,9.98e-12,20;UBERON:0000055,4.32e-11,68;UBERON:0003915,4.32e-11,9;UBERON:0004700,4.32e-11,9;UBERON:0001917,4.32e-11,9;UBERON:0000956,1.67e-10,25;UBERON:0000203,1.67e-10,25;UBERON:0010371,5.03e-10,104;UBERON:0004872,6.59e-10,83;UBERON:0003056,1.36e-09,61;UBERON:0000483,4.24e-09,306;UBERON:0000119,9.35e-09,309;UBERON:0011216,1.72e-08,223;UBERON:0002049,3.12e-08,78;UBERON:0007798,3.12e-08,78;UBERON:0007500,3.91e-08,59;UBERON:0001981,3.91e-08,59;UBERON:0004537,3.91e-08,59;UBERON:0006965,3.91e-08,59;UBERON:0001009,8.23e-08,112;UBERON:0003914,2.58e-07,117;UBERON:0002465,5.24e-07,10;UBERON:0004535,9.54e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,1.39334510984468,0,0,0,0,0,105.98975859988,0,0,0.217010870715852,0,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.659702600373432,0.398927315243264,0.426224750532694,1.16083695451434,0.56738522469114,0,1.00499466102697,0.521482918420201,0.868755378820466,4.23779651843358,1.10483290796269,0.632924774881769,0.422510572623884,0,0.628975936525128,0.336985893439485,0.450530678524519,0.803627933485401,0,0,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,145.388461436928,81.2737416323227,58.7346509048422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37770945674,3.83587685530591,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,21.1531206928806,0,0,0,0,0,0.238490624305342,0,0,111.704472940088,87.7439287008247,118.37491104819,78.5778039274373,106.133357361106,145.812562228236,118.082156093298,201.565072152077,178.238897606042,235.978031999093,111.180891522125,120.122992703525,145.460986298709,97.7983793720011,124.761859973791,242.805961204413,99.2419827007671,108.107021263989,64.392987735671,128.150864041697,110.287449846105,0,3.87780264148325,0,0,0.25326102332916,0,0,1.06400514659507,0.560677600142307,4.2699598291882,0.24666754841716,3.11211035399766,11.7198284700629,7.19232373699218,0,0,0,0,15.4027391817001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19699077692078,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929551542956147,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9826336448374,29.4507724987236,0,0,1.26755034821831,2.94848165003288,22.4500164538934,0,0,0,0,0,0,0,0,0,0,0,0,136.859392477498,104.634725842314,135.651210543269,0,0,0,0,0,0,0,0,0,0,1.15014803749563,11.3312544716067,14.2638463101426,90.6023864913174,128.699118401347,75.9979449226807,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,10.143633030672,0,0,0.257207374262142,0,0,0.428933980974443,0,0,9.12061316022458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,45.4933536283586,78.0730107219207,76.0024024679531,121.839529625329,0,0,0,0,0,0.219259876645935,0,0,0,0,29.8818933778395,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0.924100740528266,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,9.28814565337708,3.06915619677634,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,34.9273500881851,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,51.2155706066379,0,0,94.8002014305879,110.307093196243,74.2974275360829,50.3164007425561,63.1793650755282,0.684704037099577,0,35.0888267926094,75.8427164551183,0,0,0,0,0,0,0,0,0,1.23087398947712,0,138.891010655091,57.8046720860183,0,97.7209555743533,0,0,0,0.23874448473769,0.890894042497916,0,7.95318118213038,10.97221448002,0,0,0,14.345855154077,11.6039244523082,0,0,0,0,0,0,0,23.3784871359533,0,0,7.75466196876175,9.09127361986142,3.99227596002388,0,0,53.6499685821747,0,0,0,0,0,0,7.08593108651071,8.32115426515315,1.52581736317083,8.0722859749794,3.54657142744257,7.67848890038904,0,0,45.7854038097593,0,0,0,0,4.46601623624687,0,9.59462596833542,0,61.2222999940597,34.4058181533324,0,0,0,0,55.1509929061914,0,0,0,0.216388639742091,3.98104772431402,13.4455498045076,8.55442202907076,0,0,0,7.00971782999041,40.1288823649394,3.98249557733077,0,0,0,14.5996229054275,27.8278646911927,7.34574627913176,50.4228905435334,0,0,0,0,0,0,0,0,0,0,0,23.7628268809161,0.687944129886466,0,0,0,16.0031877205892,0,12.8809022244904,0,0,7.66060631066132,0,0,19.4242225212811,0,0,0,0.171594997861965,0,0,0,0,0,0,0,9.00630433064684,13.5536325103073,40.8789081814311,0,0,31.5589113437647,30.0200155455306,57.4298419661451,12.5797770314364,24.036658695648,22.0939742867454,45.5503943460004,0,0,0,0,0,0,0,5.56660782866512,12.3945099561534,0,0,0,0,0,8.26193970549135,0,25.2178263357434,30.5285702945689,0,0,0,32.1612896868015,18.5385751702321,0,0,0,0,0,33.9863035902263,0,0,13.4828054983836,7.95041333473328,9.82550468347784,10.0496777324444,0,0,45.1710755161348,49.5193561063948,34.7960806491644,20.34280689429,0,0,0,20.1286587246705,33.0910660109964,18.0743890290442,26.885555718204,0,7.08854543973589,10.3722325166669,11.3923746942915,11.4681839138014,11.2038342052221,13.3507266323974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.784158019835,0,0,0,0,0,0,0,0,0,0,0,0,8.70908164046162,0,0,0,0,0,0,0,0,0,162.376332957581,0,0,0,8.47825771273266,15.5866233958143,12.9303425836293,6.56372365570416,2.7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| ||
|short_description=p1@ERG | |||
}} | }} |
Latest revision as of 10:28, 18 September 2015
Short description: | p1@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ERG_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000288319, ENST00000398905, ENST00000398907, ENST00000429727, ENST00000453032, ENST00000481609, NM_001136155, NM_182918, uc002yxa.2, uc011aek.1, uc011aem.1_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | B5MDW0A8MX39B4E3C5P11308 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.94e-27 | 24 |
endothelial cell | 1.82e-25 | 36 |
blood vessel endothelial cell | 1.11e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.11e-20 | 18 |
meso-epithelial cell | 7.69e-18 | 45 |
lining cell | 2.91e-11 | 58 |
barrier cell | 2.91e-11 | 58 |
endothelial cell of artery | 4.32e-11 | 9 |
lymphangioblast | 2.64e-08 | 6 |
endothelial cell of lymphatic vessel | 2.64e-08 | 6 |
vascular lymphangioblast | 2.64e-08 | 6 |
vein endothelial cell | 6.13e-08 | 6 |
aortic endothelial cell | 7.44e-08 | 6 |