FFCP PHASE1:Hg19::chr21:43256981..43257008,-: Difference between revisions
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|id=chr21:43256981..43257008,-
|short_description=p2@PRDM15
|description=CAGE_peak_2_at_PRDM15_5end
|association_with_transcript=0bp_to_ENST00000489661_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63977 | |EntrezGene=63977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13999 | |HGNC=13999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489661_5end | |||
|cluster_id=chr21:43256981..43257008,- | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_2_at_PRDM15_5end | |||
|id=chr21:43256981..43257008,- | |||
|ontology_enrichment_celltype=CL:0000945!3.05e-23!24;CL:0000826!3.05e-23!24;CL:0000236!2.18e-12!14;CL:0000785!3.68e-11!2;CL:0000955!3.68e-11!2;CL:0000818!3.68e-11!2;CL:0000954!3.68e-11!2;CL:0000816!3.68e-11!2;CL:0000838!1.60e-09!52;CL:0000542!2.67e-09!53;CL:0000051!2.67e-09!53;CL:0000817!1.04e-07!3;CL:0000039!6.69e-07!7;CL:0000586!6.69e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.70e-30;24!CL:0000785;1.88e-21;1!CL:0000819;1.88e-21;1!CL:0000236;2.27e-14;13!CL:0000039;3.63e-12;7!CL:0000586;3.63e-12;7!CL:0000542;2.07e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-29,24;CL:0000826,1.02e-29,24;CL:0000819,1.88e-21,1;CL:0000838,9.85e-14,52;CL:0000542,1.79e-13,53;CL:0000051,1.79e-13,53;CL:0000236,2.25e-13,14;CL:0000039,3.53e-12,7;CL:0000586,3.53e-12,7;CL:0000785,2.02e-11,2;CL:0000955,2.02e-11,2;CL:0000818,2.02e-11,2;CL:0000954,2.02e-11,2;CL:0000816,2.02e-11,2;CL:0000817,4.84e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.45e-21;1!CL:0000954;2.02e-11;2!CL:0000051;2.07e-11;53!UBERON:0009117;8.45e-09;10!UBERON:0005564;8.45e-09;10 | |||
|ontology_enrichment_disease=DOID:0060058!1.54e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.09e-32;10!DOID:0060073;1.88e-21;1!DOID:8675;1.88e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.09e-32,10;DOID:0060073,1.88e-21,1;DOID:8675,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.05e-10!7;UBERON:0007023!1.63e-10!115;UBERON:0000473!7.33e-10!8;UBERON:0003408!8.15e-08!10;UBERON:0001042!9.43e-08!10;UBERON:0009145!9.43e-08!10;UBERON:0003135!3.45e-07!11;UBERON:0002106!4.13e-07!3;UBERON:0004854!4.13e-07!3;UBERON:0009034!4.13e-07!3;UBERON:0002095!4.13e-07!3;UBERON:0004782!4.13e-07!3;UBERON:0003281!4.13e-07!3;UBERON:0009664!4.13e-07!3;UBERON:0002296!4.13e-07!3;UBERON:0005602!4.13e-07!3;UBERON:0001179!4.13e-07!3;UBERON:0006293!4.13e-07!3;UBERON:0006562!4.72e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.45e-21;1!UBERON:0001153;3.45e-21;1!UBERON:0009854;3.45e-21;1!UBERON:0002372;4.67e-21;1!UBERON:0001961;4.67e-21;1!UBERON:0001744;4.67e-21;1!UBERON:0001042;4.67e-21;1!UBERON:0001735;4.67e-21;1!UBERON:0006562;3.18e-11;2!UBERON:0000473;9.12e-11;8!UBERON:0003135;4.42e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.45e-21,1;UBERON:0001153,3.45e-21,1;UBERON:0001045,3.45e-21,1;UBERON:0002372,4.22e-21,1;UBERON:0001961,4.22e-21,1;UBERON:0001744,4.22e-21,1;UBERON:0001735,4.22e-21,1;UBERON:0000473,8.90e-11,8;UBERON:0003135,4.34e-08,11 | |||
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|short_description=p2@PRDM15 | |||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p2@PRDM15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRDM15_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 0bp_to_ENST00000489661_5end |
EntrezGene: | PRDM15 |
HGNC: | 13999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-29 | 24 |
pro-B cell | 1.02e-29 | 24 |
B-1 B cell | 1.88e-21 | 1 |
lymphoid lineage restricted progenitor cell | 9.85e-14 | 52 |
lymphocyte | 1.79e-13 | 53 |
common lymphoid progenitor | 1.79e-13 | 53 |
B cell | 2.25e-13 | 14 |
germ line cell | 3.53e-12 | 7 |
germ cell | 3.53e-12 | 7 |
mature B cell | 2.02e-11 | 2 |
pre-B-II cell | 2.02e-11 | 2 |
transitional stage B cell | 2.02e-11 | 2 |
small pre-B-II cell | 2.02e-11 | 2 |
immature B cell | 2.02e-11 | 2 |
precursor B cell | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.45e-21 | 1 |
caecum | 3.45e-21 | 1 |
midgut | 3.45e-21 | 1 |
tonsil | 4.22e-21 | 1 |
mucosa-associated lymphoid tissue | 4.22e-21 | 1 |
lymphoid tissue | 4.22e-21 | 1 |
tonsillar ring | 4.22e-21 | 1 |
testis | 8.90e-11 | 8 |
male reproductive organ | 4.34e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.09e-32 | 10 |
lymphatic system cancer | 1.88e-21 | 1 |
lymphosarcoma | 1.88e-21 | 1 |