FFCP PHASE1:Hg19::chr14:29237009..29237049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt=P55316 | |UniProt=P55316 | ||
|association_with_transcript=79bp_to_X74144_5end | |association_with_transcript=79bp_to_X74144_5end | ||
|cluster_id=chr14:29237009..29237049,+ | |||
|coexpression_cluster_id=C3421 | |coexpression_cluster_id=C3421 | ||
|description=CAGE_peak_4_at_FOXG1_5end | |description=CAGE_peak_4_at_FOXG1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!1.65e-14!25;CL:0000243!6.25e-12!15;CL:0000125!6.25e-12!15;CL:0000030!6.25e-12!15;CL:0000339!6.25e-12!15;CL:0000095!2.61e-10!17;CL:0000123!2.61e-10!17;CL:0000128!4.75e-10!7;CL:0000126!4.75e-10!7;CL:0000127!4.75e-10!7;CL:0002453!4.75e-10!7;CL:0000133!1.36e-08!59;CL:0000221!8.46e-07!71;CL:0000306!8.98e-07!4;CL:0002222!8.98e-07!4;CL:0002224!8.98e-07!4 | |ontology_enrichment_celltype=CL:0002319!1.65e-14!25;CL:0000243!6.25e-12!15;CL:0000125!6.25e-12!15;CL:0000030!6.25e-12!15;CL:0000339!6.25e-12!15;CL:0000095!2.61e-10!17;CL:0000123!2.61e-10!17;CL:0000128!4.75e-10!7;CL:0000126!4.75e-10!7;CL:0000127!4.75e-10!7;CL:0002453!4.75e-10!7;CL:0000133!1.36e-08!59;CL:0000221!8.46e-07!71;CL:0000306!8.98e-07!4;CL:0002222!8.98e-07!4;CL:0002224!8.98e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.76e-13;25!CL:0000128;1.23e-08;7!CL:0000126;1.23e-08;7!CL:0000127;1.23e-08;7!CL:0002605;3.24e-08;3!CL:0000243;4.97e-08;15!CL:0000125;4.97e-08;15!CL:0000064;2.03e-07;3!CL:0000067;2.03e-07;3!CL:0005012;2.03e-07;3!CL:0002304;2.03e-07;3!CL:0000095;4.85e-07;17!CL:0000047;7.19e-07;2 | |ontology_enrichment_celltype_v019=CL:0002319;1.76e-13;25!CL:0000128;1.23e-08;7!CL:0000126;1.23e-08;7!CL:0000127;1.23e-08;7!CL:0002605;3.24e-08;3!CL:0000243;4.97e-08;15!CL:0000125;4.97e-08;15!CL:0000064;2.03e-07;3!CL:0000067;2.03e-07;3!CL:0005012;2.03e-07;3!CL:0002304;2.03e-07;3!CL:0000095;4.85e-07;17!CL:0000047;7.19e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.33e-13,25;CL:0000047,5.54e-09,8;CL:0000128,9.47e-09,7;CL:0000126,9.47e-09,7;CL:0000127,9.47e-09,7;CL:0002453,9.47e-09,7;CL:0002605,2.53e-08,3;CL:0000243,3.81e-08,15;CL:0000125,3.81e-08,15;CL:0000030,3.81e-08,15;CL:0000339,3.81e-08,15;CL:0000064,1.79e-07,3;CL:0000067,1.79e-07,3;CL:0005012,1.79e-07,3;CL:0002304,1.79e-07,3;CL:0000095,3.84e-07,17;CL:0000123,3.84e-07,17;CL:0000133,7.08e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.69e-10;10!UBERON:0006601;4.28e-09;82!CL:0000339;4.97e-08;15 | |ontology_enrichment_development_v019=UBERON:0006238;2.69e-10;10!UBERON:0006601;4.28e-09;82!CL:0000339;4.97e-08;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-48!82;UBERON:0005743!6.77e-47!86;UBERON:0002780!6.73e-46!41;UBERON:0001890!6.73e-46!41;UBERON:0006240!6.73e-46!41;UBERON:0001869!1.06e-45!32;UBERON:0001893!3.10e-45!34;UBERON:0000073!3.31e-45!94;UBERON:0001016!3.31e-45!94;UBERON:0003080!1.64e-44!42;UBERON:0000955!4.71e-44!69;UBERON:0006238!4.71e-44!69;UBERON:0003056!5.18e-44!61;UBERON:0002791!9.43e-44!33;UBERON:0002020!1.97e-39!34;UBERON:0003528!1.97e-39!34;UBERON:0003075!1.52e-38!86;UBERON:0007284!1.52e-38!86;UBERON:0000153!8.39e-37!129;UBERON:0007811!8.39e-37!129;UBERON:0001049!1.31e-36!57;UBERON:0005068!1.31e-36!57;UBERON:0006241!1.31e-36!57;UBERON:0007135!1.31e-36!57;UBERON:0002616!1.34e-36!59;UBERON:0002346!4.72e-36!90;UBERON:0000956!1.00e-35!25;UBERON:0000203!1.00e-35!25;UBERON:0000033!3.28e-34!123;UBERON:0002619!1.54e-31!22;UBERON:0004121!1.17e-29!169;UBERON:0000924!1.82e-28!173;UBERON:0006601!1.82e-28!173;UBERON:0001950!2.14e-28!20;UBERON:0007023!2.41e-16!115;UBERON:0000025!6.08e-15!194;UBERON:0000483!1.93e-12!309;UBERON:0000475!2.41e-12!365;UBERON:0000119!4.11e-12!312;UBERON:0000064!1.45e-11!219;UBERON:0002420!3.07e-11!9;UBERON:0007245!3.07e-11!9;UBERON:0010009!3.07e-11!9;UBERON:0010011!3.07e-11!9;UBERON:0000454!3.07e-11!9;UBERON:0001871!2.43e-10!7;UBERON:0000200!4.35e-10!6;UBERON:0000477!7.08e-10!286;UBERON:0004111!9.84e-10!241;UBERON:0000349!2.58e-09!5;UBERON:0002021!1.30e-08!5;UBERON:0000922!1.43e-08!612;UBERON:0001872!1.80e-08!5;UBERON:0009663!2.59e-08!7;UBERON:0000481!3.77e-08!347;UBERON:0007625!7.74e-08!11;UBERON:0000923!8.30e-08!604;UBERON:0005291!8.30e-08!604;UBERON:0006598!8.30e-08!604;UBERON:0002532!8.30e-08!604;UBERON:0002050!9.58e-08!605;UBERON:0005423!9.58e-08!605;UBERON:0000369!2.12e-07!4;UBERON:0002435!2.12e-07!4;UBERON:0000204!2.12e-07!4;UBERON:0010082!2.12e-07!4;UBERON:0000467!2.22e-07!625;UBERON:0000480!2.55e-07!626;UBERON:0010077!8.98e-07!4;UBERON:0005389!8.98e-07!4;UBERON:0000484!8.98e-07!4;UBERON:0002546!8.98e-07!4;UBERON:0000965!8.98e-07!4;UBERON:0001803!8.98e-07!4;UBERON:0003073!8.98e-07!4;UBERON:0005426!8.98e-07!4 | |ontology_enrichment_uberon=UBERON:0001017!2.07e-48!82;UBERON:0005743!6.77e-47!86;UBERON:0002780!6.73e-46!41;UBERON:0001890!6.73e-46!41;UBERON:0006240!6.73e-46!41;UBERON:0001869!1.06e-45!32;UBERON:0001893!3.10e-45!34;UBERON:0000073!3.31e-45!94;UBERON:0001016!3.31e-45!94;UBERON:0003080!1.64e-44!42;UBERON:0000955!4.71e-44!69;UBERON:0006238!4.71e-44!69;UBERON:0003056!5.18e-44!61;UBERON:0002791!9.43e-44!33;UBERON:0002020!1.97e-39!34;UBERON:0003528!1.97e-39!34;UBERON:0003075!1.52e-38!86;UBERON:0007284!1.52e-38!86;UBERON:0000153!8.39e-37!129;UBERON:0007811!8.39e-37!129;UBERON:0001049!1.31e-36!57;UBERON:0005068!1.31e-36!57;UBERON:0006241!1.31e-36!57;UBERON:0007135!1.31e-36!57;UBERON:0002616!1.34e-36!59;UBERON:0002346!4.72e-36!90;UBERON:0000956!1.00e-35!25;UBERON:0000203!1.00e-35!25;UBERON:0000033!3.28e-34!123;UBERON:0002619!1.54e-31!22;UBERON:0004121!1.17e-29!169;UBERON:0000924!1.82e-28!173;UBERON:0006601!1.82e-28!173;UBERON:0001950!2.14e-28!20;UBERON:0007023!2.41e-16!115;UBERON:0000025!6.08e-15!194;UBERON:0000483!1.93e-12!309;UBERON:0000475!2.41e-12!365;UBERON:0000119!4.11e-12!312;UBERON:0000064!1.45e-11!219;UBERON:0002420!3.07e-11!9;UBERON:0007245!3.07e-11!9;UBERON:0010009!3.07e-11!9;UBERON:0010011!3.07e-11!9;UBERON:0000454!3.07e-11!9;UBERON:0001871!2.43e-10!7;UBERON:0000200!4.35e-10!6;UBERON:0000477!7.08e-10!286;UBERON:0004111!9.84e-10!241;UBERON:0000349!2.58e-09!5;UBERON:0002021!1.30e-08!5;UBERON:0000922!1.43e-08!612;UBERON:0001872!1.80e-08!5;UBERON:0009663!2.59e-08!7;UBERON:0000481!3.77e-08!347;UBERON:0007625!7.74e-08!11;UBERON:0000923!8.30e-08!604;UBERON:0005291!8.30e-08!604;UBERON:0006598!8.30e-08!604;UBERON:0002532!8.30e-08!604;UBERON:0002050!9.58e-08!605;UBERON:0005423!9.58e-08!605;UBERON:0000369!2.12e-07!4;UBERON:0002435!2.12e-07!4;UBERON:0000204!2.12e-07!4;UBERON:0010082!2.12e-07!4;UBERON:0000467!2.22e-07!625;UBERON:0000480!2.55e-07!626;UBERON:0010077!8.98e-07!4;UBERON:0005389!8.98e-07!4;UBERON:0000484!8.98e-07!4;UBERON:0002546!8.98e-07!4;UBERON:0000965!8.98e-07!4;UBERON:0001803!8.98e-07!4;UBERON:0003073!8.98e-07!4;UBERON:0005426!8.98e-07!4 | ||
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|short_description=p4@FOXG1 | |short_description=p4@FOXG1 | ||
}} | }} |
Latest revision as of 16:30, 19 September 2015
Short description: | p4@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXG1_5end |
Coexpression cluster: | C3421_Neural_caudate_medulloblastoma_Neurons_small_Astrocyte_putamen |
Association with transcript: | 79bp_to_X74144_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.33e-13 | 25 |
neuronal stem cell | 5.54e-09 | 8 |
oligodendrocyte | 9.47e-09 | 7 |
macroglial cell | 9.47e-09 | 7 |
astrocyte | 9.47e-09 | 7 |
oligodendrocyte precursor cell | 9.47e-09 | 7 |
astrocyte of the cerebral cortex | 2.53e-08 | 3 |
glial cell (sensu Vertebrata) | 3.81e-08 | 15 |
glial cell | 3.81e-08 | 15 |
glioblast | 3.81e-08 | 15 |
glioblast (sensu Vertebrata) | 3.81e-08 | 15 |
ciliated cell | 1.79e-07 | 3 |
ciliated epithelial cell | 1.79e-07 | 3 |
multi-ciliated epithelial cell | 1.79e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.79e-07 | 3 |
neuron associated cell | 3.84e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.84e-07 | 17 |
neurectodermal cell | 7.08e-07 | 59 |