FFCP PHASE1:Hg19::chr21:9831245..9831290,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:9831245..9831290,+
|short_description=p@chr21:9831245..9831290,+
|description=CAGE_peak_at_chr21:9831245..9831290,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:9831245..9831290,+ | |||
|coexpression_cluster_id=C1074 | |||
|description=CAGE_peak_at_chr21:9831245..9831290,+ | |||
|id=chr21:9831245..9831290,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.26e-11!7;CL:0000586!1.26e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.10e-15;7!CL:0000586;1.10e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.25e-16,7;CL:0000586,7.25e-16,7;CL:0000047,4.68e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.98e-11;10!UBERON:0005564;4.98e-11;10!UBERON:0005425;7.33e-08;1 | |||
|ontology_enrichment_disease=DOID:14566!1.77e-12!239;DOID:162!1.31e-11!235;DOID:0050687!2.72e-10!143;DOID:305!3.22e-08!106;DOID:1036!7.63e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.19e-08;8!DOID:0060085;7.33e-08;1!DOID:3165;7.33e-08;1!DOID:0060121;7.33e-08;1!DOID:2438;7.33e-08;1!DOID:4418;7.33e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.66e-08,8;DOID:0060085,5.40e-08,1;DOID:3165,5.40e-08,1;DOID:0060121,5.40e-08,1;DOID:2438,5.40e-08,1;DOID:4418,5.40e-08,1;DOID:0050687,1.08e-07,143;DOID:162,1.65e-07,235;DOID:14566,2.85e-07,239;DOID:305,6.33e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.53e-14;8!UBERON:0003135;4.88e-10;11!UBERON:0002134;7.33e-08;1!UBERON:0000941;7.33e-08;1!UBERON:0001785;7.33e-08;1!UBERON:0002464;7.33e-08;1!UBERON:0004904;7.33e-08;1!UBERON:0001021;7.33e-08;1!UBERON:0005208;7.33e-08;1!UBERON:0004145;7.33e-08;1!UBERON:0005946;7.33e-08;1!UBERON:0005965;7.33e-08;1!UBERON:0002078;7.33e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.54e-14,8;UBERON:0003135,4.88e-10,11;UBERON:0002134,7.10e-08,1;UBERON:0005208,7.10e-08,1;UBERON:0005946,7.10e-08,1;UBERON:0005965,7.10e-08,1;UBERON:0002078,7.10e-08,1;UBERON:0000941,7.59e-08,1;UBERON:0001785,7.59e-08,1;UBERON:0002464,7.59e-08,1;UBERON:0004904,7.59e-08,1;UBERON:0001021,7.59e-08,1;UBERON:0003902,7.59e-08,1;UBERON:0005425,7.59e-08,1 | |||
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| ||
|short_description=p@chr21:9831245..9831290,+ | |||
}} | }} |
Latest revision as of 18:54, 28 July 2015
Short description: | p@chr21:9831245..9831290, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:9831245..9831290, + |
Coexpression cluster: | C1074_chronic_testicular_melanoma_hepatocellular_pagetoid_acute_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.25e-16 | 7 |
germ cell | 7.25e-16 | 7 |
neuronal stem cell | 4.68e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 9.54e-14 | 8 |
male reproductive organ | 4.88e-10 | 11 |
tricuspid valve | 7.10e-08 | 1 |
right atrium valve | 7.10e-08 | 1 |
outflow tract of atrium | 7.10e-08 | 1 |
outflow part of right atrium | 7.10e-08 | 1 |
right cardiac atrium | 7.10e-08 | 1 |
cranial nerve II | 7.59e-08 | 1 |
cranial nerve | 7.59e-08 | 1 |
nerve trunk | 7.59e-08 | 1 |
nerve connecting eye with brain | 7.59e-08 | 1 |
nerve | 7.59e-08 | 1 |
retinal neural layer | 7.59e-08 | 1 |
presumptive neural retina | 7.59e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.66e-08 | 8 |
organ system benign neoplasm | 5.40e-08 | 1 |
skin benign neoplasm | 5.40e-08 | 1 |
integumentary system benign neoplasm | 5.40e-08 | 1 |
dermis tumor | 5.40e-08 | 1 |
cutaneous fibrous histiocytoma | 5.40e-08 | 1 |
cell type cancer | 1.08e-07 | 143 |
cancer | 1.65e-07 | 235 |
disease of cellular proliferation | 2.85e-07 | 239 |
carcinoma | 6.33e-07 | 106 |